RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 IFITM1P13164 125 aa5.09□□□□□ -1.59
CCDC90B-219ENST00000534753 SMIM29Q86T20 159 aa5.09□□□□□ -1.59
CCDC90B-219ENST00000534753 DHRS4-AS1Q9P1J3 65 aa5.09□□□□□ -1.59
CCDC90B-219ENST00000534753 SPINK1P00995 79 aa5.08□□□□□ -1.6
CCDC90B-219ENST00000534753 TAL2Q16559 108 aa5.08□□□□□ -1.6
CCDC90B-219ENST00000534753 HRCT1Q6UXD1 115 aa5.08□□□□□ -1.6
CCDC90B-219ENST00000534753 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
CCDC90B-219ENST00000534753 LINC01547P58512 204 aaPredicted RBP5.07□□□□□ -1.6
CCDC90B-219ENST00000534753 ELOF1P60002 83 aaKnown RBP5.07□□□□□ -1.6
CCDC90B-219ENST00000534753 Q1RN00 199 aa5.07□□□□□ -1.6
CCDC90B-219ENST00000534753 Q6ZVH6 145 aa5.07□□□□□ -1.6
CCDC90B-219ENST00000534753 CTAG1AP78358 180 aa5.06□□□□□ -1.6
CCDC90B-219ENST00000534753 LAMTOR3Q9UHA4 124 aa5.06□□□□□ -1.6
CCDC90B-219ENST00000534753 TRAV13-2A0A0B4J235 113 aa5.05□□□□□ -1.6
CCDC90B-219ENST00000534753 TPRXLQ17RH7 258 aa5.05□□□□□ -1.6
CCDC90B-219ENST00000534753 SLC25A34Q6PIV7 304 aa5.05□□□□□ -1.6
CCDC90B-219ENST00000534753 A0A1B0GWB2 263 aa5.04□□□□□ -1.6
CCDC90B-219ENST00000534753 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
CCDC90B-219ENST00000534753 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
CCDC90B-219ENST00000534753 C12orf57Q99622 126 aa5.04□□□□□ -1.6
CCDC90B-219ENST00000534753 TRBV7-6A0A0J9YX20 115 aa5.03□□□□□ -1.6
CCDC90B-219ENST00000534753 SLC25A20O43772 301 aa5.03□□□□□ -1.6
CCDC90B-219ENST00000534753 Q8N377 158 aa5.03□□□□□ -1.6
CCDC90B-219ENST00000534753 HIST1H4GQ99525 98 aa5.03□□□□□ -1.6
CCDC90B-219ENST00000534753 TEX49A0A1B0GTD5 131 aa5.02□□□□□ -1.61
CCDC90B-219ENST00000534753 H7C2G1 150 aa5.02□□□□□ -1.61
CCDC90B-219ENST00000534753 SPRR1BP22528 89 aa5.02□□□□□ -1.61
CCDC90B-219ENST00000534753 VAMP3Q15836 100 aa5.02□□□□□ -1.61
CCDC90B-219ENST00000534753 C14orf144Q96I85 54 aa5.01□□□□□ -1.61
CCDC90B-219ENST00000534753 A0A0G2JQZ4 141 aa5□□□□□ -1.61
CCDC90B-219ENST00000534753 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
CCDC90B-219ENST00000534753 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
CCDC90B-219ENST00000534753 PRO1933Q9H354 126 aa5□□□□□ -1.61
CCDC90B-219ENST00000534753 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
CCDC90B-219ENST00000534753 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
CCDC90B-219ENST00000534753 COX8AP10176 69 aa4.99□□□□□ -1.61
CCDC90B-219ENST00000534753 SPATA45Q537H7 98 aa4.99□□□□□ -1.61
CCDC90B-219ENST00000534753 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
CCDC90B-219ENST00000534753 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
CCDC90B-219ENST00000534753 VAMP8Q9BV40 100 aa4.98□□□□□ -1.61
CCDC90B-219ENST00000534753 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
CCDC90B-219ENST00000534753 F8WEM9 126 aa4.97□□□□□ -1.61
CCDC90B-219ENST00000534753 LINC00575Q6W349 94 aa4.97□□□□□ -1.61
CCDC90B-219ENST00000534753 RAB37Q96AX2 223 aa4.97□□□□□ -1.61
CCDC90B-219ENST00000534753 IGLV5-48A0A075B6I7 105 aa4.96□□□□□ -1.62
CCDC90B-219ENST00000534753 C9orf92A6NGG3 77 aa4.96□□□□□ -1.62
CCDC90B-219ENST00000534753 Q6ZQY7 126 aa4.96□□□□□ -1.62
CCDC90B-219ENST00000534753 DLEU1O43261 78 aa4.94□□□□□ -1.62
CCDC90B-219ENST00000534753 CD164Q04900 197 aa4.94□□□□□ -1.62
CCDC90B-219ENST00000534753 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CCDC90B-219ENST00000534753 CFC1BP0CG36 223 aa4.93□□□□□ -1.62
CCDC90B-219ENST00000534753 CFC1P0CG37 223 aa4.93□□□□□ -1.62
CCDC90B-219ENST00000534753 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
CCDC90B-219ENST00000534753 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
CCDC90B-219ENST00000534753 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
CCDC90B-219ENST00000534753 C2orf91Q6ZV80 131 aa4.92□□□□□ -1.62
CCDC90B-219ENST00000534753 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
CCDC90B-219ENST00000534753 HIGD1BQ9P298 99 aa4.92□□□□□ -1.62
CCDC90B-219ENST00000534753 MUC17Q685J3 4493 aa4.9□□□□□ -1.62
CCDC90B-219ENST00000534753 SNCGO76070 127 aa4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 TCL1BO95988 128 aa4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 OCIAD2Q56VL3 154 aa4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 C1orf195Q5TG92 126 aa4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 CEND1Q8N111 149 aa4.9□□□□□ -1.63
CCDC90B-219ENST00000534753 A0A0B4J2C4 111 aa4.89□□□□□ -1.63
CCDC90B-219ENST00000534753 H3BUT2 72 aa4.89□□□□□ -1.63
CCDC90B-219ENST00000534753 FXYD2P54710 66 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 Q6JHZ5 121 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 FAM218AQ96MZ4 157 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
CCDC90B-219ENST00000534753 H0YGX0 51 aa4.87□□□□□ -1.63
CCDC90B-219ENST00000534753 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
CCDC90B-219ENST00000534753 FABP2P12104 132 aa4.86□□□□□ -1.63
CCDC90B-219ENST00000534753 PSMB2P49721 201 aa4.86□□□□□ -1.63
CCDC90B-219ENST00000534753 Q5XG85 94 aa4.86□□□□□ -1.63
CCDC90B-219ENST00000534753 IGLV8-61A0A075B6I0 122 aa4.85□□□□□ -1.63
CCDC90B-219ENST00000534753 TRBV7-7A0A0K0K1E9 115 aa4.85□□□□□ -1.63
CCDC90B-219ENST00000534753 A0A1B0GV72 72 aa4.85□□□□□ -1.63
CCDC90B-219ENST00000534753 K7ERJ3 54 aa4.85□□□□□ -1.63
CCDC90B-219ENST00000534753 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
CCDC90B-219ENST00000534753 NDUFV3P56181 108 aaKnown RBP4.84□□□□□ -1.63
CCDC90B-219ENST00000534753 HSD52Q0P140 79 aa4.84□□□□□ -1.63
CCDC90B-219ENST00000534753 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
CCDC90B-219ENST00000534753 H3BMG7 143 aa4.82□□□□□ -1.64
CCDC90B-219ENST00000534753 LST1O00453 97 aa4.82□□□□□ -1.64
CCDC90B-219ENST00000534753 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
CCDC90B-219ENST00000534753 DNAL4O96015 105 aa4.81□□□□□ -1.64
CCDC90B-219ENST00000534753 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
CCDC90B-219ENST00000534753 OBSCN-AS1Q96MR7 158 aa4.8□□□□□ -1.64
CCDC90B-219ENST00000534753 A0A1B0GX51 115 aa4.79□□□□□ -1.64
CCDC90B-219ENST00000534753 COX6CP09669 75 aa4.79□□□□□ -1.64
CCDC90B-219ENST00000534753 SCGB1C2P0DMR2 95 aa4.79□□□□□ -1.64
CCDC90B-219ENST00000534753 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
CCDC90B-219ENST00000534753 TEN1Q86WV5 123 aa4.79□□□□□ -1.64
CCDC90B-219ENST00000534753 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms