RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 COLCA2A8K830 154 aa10.61□□□□□ -0.71
CHKA-206ENST00000531341 IFITM1P13164 125 aa10.6□□□□□ -0.71
CHKA-206ENST00000531341 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
CHKA-206ENST00000531341 Q6JHZ5 121 aa10.59□□□□□ -0.71
CHKA-206ENST00000531341 C20orf166-AS1Q96NR2 134 aa10.59□□□□□ -0.71
CHKA-206ENST00000531341 Q6ZQY7 126 aa10.58□□□□□ -0.72
CHKA-206ENST00000531341 SLC7A5P1Q8MH63 180 aa10.58□□□□□ -0.72
CHKA-206ENST00000531341 TRBV20-1A0A075B6N2 111 aa10.57□□□□□ -0.72
CHKA-206ENST00000531341 A8MUU9 505 aa10.57□□□□□ -0.72
CHKA-206ENST00000531341 OCIAD2Q56VL3 154 aa10.57□□□□□ -0.72
CHKA-206ENST00000531341 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
CHKA-206ENST00000531341 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CHKA-206ENST00000531341 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
CHKA-206ENST00000531341 COPS9Q8WXC6 57 aa10.56□□□□□ -0.72
CHKA-206ENST00000531341 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
CHKA-206ENST00000531341 LST1O00453 97 aa10.54□□□□□ -0.72
CHKA-206ENST00000531341 Q6ZVH6 145 aa10.53□□□□□ -0.72
CHKA-206ENST00000531341 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
CHKA-206ENST00000531341 KRTAP16-1A8MUX0 517 aa10.52□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
CHKA-206ENST00000531341 VAMP3Q15836 100 aa10.49□□□□□ -0.73
CHKA-206ENST00000531341 H3BUT2 72 aa10.48□□□□□ -0.73
CHKA-206ENST00000531341 KRTDAPP60985 99 aa10.46□□□□□ -0.73
CHKA-206ENST00000531341 ATOH7Q8N100 152 aa10.46□□□□□ -0.73
CHKA-206ENST00000531341 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CHKA-206ENST00000531341 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CHKA-206ENST00000531341 DSCR10P59022 87 aa10.43□□□□□ -0.74
CHKA-206ENST00000531341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.41□□□□□ -0.74
CHKA-206ENST00000531341 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
CHKA-206ENST00000531341 SNHG12Q9BXW3 62 aa10.4□□□□□ -0.74
CHKA-206ENST00000531341 HRES1P13985 223 aa10.39□□□□□ -0.75
CHKA-206ENST00000531341 KRTAP19-6Q3LI70 58 aa10.37□□□□□ -0.75
CHKA-206ENST00000531341 SS18L2Q9UHA2 77 aa10.37□□□□□ -0.75
CHKA-206ENST00000531341 PPDPFLQ8WWR9 84 aa10.36□□□□□ -0.75
CHKA-206ENST00000531341 A0A087WSZ3 146 aa10.33□□□□□ -0.76
CHKA-206ENST00000531341 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
CHKA-206ENST00000531341 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
CHKA-206ENST00000531341 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
CHKA-206ENST00000531341 NOTCH2NLQ7Z3S9 236 aa10.3□□□□□ -0.76
CHKA-206ENST00000531341 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
CHKA-206ENST00000531341 C12orf57Q99622 126 aa10.29□□□□□ -0.76
CHKA-206ENST00000531341 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
CHKA-206ENST00000531341 LINC00846Q9NV44 126 aa10.27□□□□□ -0.77
CHKA-206ENST00000531341 LINC00313P59037 77 aa10.26□□□□□ -0.77
CHKA-206ENST00000531341 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
CHKA-206ENST00000531341 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
CHKA-206ENST00000531341 KRTAP6-3Q3LI67 103 aa10.23□□□□□ -0.77
CHKA-206ENST00000531341 A0A1W2PNM2 257 aa10.19□□□□□ -0.78
CHKA-206ENST00000531341 SNRPEP62304 92 aaKnown RBP10.19□□□□□ -0.78
CHKA-206ENST00000531341 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
CHKA-206ENST00000531341 H3BMG7 143 aa10.17□□□□□ -0.78
CHKA-206ENST00000531341 IGKV4-1P06312 121 aa10.17□□□□□ -0.78
CHKA-206ENST00000531341 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
CHKA-206ENST00000531341 HIST1H4GQ99525 98 aa10.1□□□□□ -0.79
CHKA-206ENST00000531341 FABP2P12104 132 aa10.08□□□□□ -0.8
CHKA-206ENST00000531341 NEBP20929 6669 aa10.07□□□□□ -0.8
CHKA-206ENST00000531341 IGHV6-1A0A0B4J1U7 121 aa10.07□□□□□ -0.8
CHKA-206ENST00000531341 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
CHKA-206ENST00000531341 Q8N9P0 234 aaPredicted RBP10.07□□□□□ -0.8
CHKA-206ENST00000531341 H0YGX0 51 aa10.06□□□□□ -0.8
CHKA-206ENST00000531341 HSBP1L1C9JCN9 74 aa10.05□□□□□ -0.8
CHKA-206ENST00000531341 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
CHKA-206ENST00000531341 SNCGO76070 127 aa10.04□□□□□ -0.8
CHKA-206ENST00000531341 MUC12Q9UKN1 5478 aa10.03□□□□□ -0.8
CHKA-206ENST00000531341 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
CHKA-206ENST00000531341 A8MWP4 228 aa10.02□□□□□ -0.81
CHKA-206ENST00000531341 SPINK7P58062 85 aa10.02□□□□□ -0.81
CHKA-206ENST00000531341 A0A1B0GV72 72 aa10.01□□□□□ -0.81
CHKA-206ENST00000531341 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
CHKA-206ENST00000531341 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
CHKA-206ENST00000531341 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
CHKA-206ENST00000531341 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
CHKA-206ENST00000531341 ZCCHC13Q8WW36 166 aaKnown RBP9.98□□□□□ -0.81
CHKA-206ENST00000531341 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
CHKA-206ENST00000531341 A0A1B0GX51 115 aa9.95□□□□□ -0.82
CHKA-206ENST00000531341 COX8AP10176 69 aa9.95□□□□□ -0.82
CHKA-206ENST00000531341 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
CHKA-206ENST00000531341 GHRHP01286 108 aa9.92□□□□□ -0.82
CHKA-206ENST00000531341 C8orf87E5RJ46 101 aa9.91□□□□□ -0.82
CHKA-206ENST00000531341 CCKP06307 115 aa9.9□□□□□ -0.82
CHKA-206ENST00000531341 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
CHKA-206ENST00000531341 S100A2P29034 98 aa9.89□□□□□ -0.83
CHKA-206ENST00000531341 DLEU1O43261 78 aa9.88□□□□□ -0.83
CHKA-206ENST00000531341 TRACP01848 142 aa9.88□□□□□ -0.83
CHKA-206ENST00000531341 TRIAP1O43715 76 aa9.86□□□□□ -0.83
CHKA-206ENST00000531341 C14orf144Q96I85 54 aa9.86□□□□□ -0.83
CHKA-206ENST00000531341 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
CHKA-206ENST00000531341 ORMDL1Q9P0S3 153 aa9.83□□□□□ -0.84
CHKA-206ENST00000531341 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms