RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TEX49A0A1B0GTD5 131 aa8.61□□□□□ -1.03
CPSF1-205ENST00000531042 FXYD2P54710 66 aa8.61□□□□□ -1.03
CPSF1-205ENST00000531042 CD164Q04900 197 aa8.61□□□□□ -1.03
CPSF1-205ENST00000531042 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
CPSF1-205ENST00000531042 A6NJY4 79 aa8.6□□□□□ -1.03
CPSF1-205ENST00000531042 A0A1B0GWB2 263 aa8.59□□□□□ -1.03
CPSF1-205ENST00000531042 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
CPSF1-205ENST00000531042 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
CPSF1-205ENST00000531042 SMIM29Q86T20 159 aa8.59□□□□□ -1.03
CPSF1-205ENST00000531042 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
CPSF1-205ENST00000531042 IFITM1P13164 125 aa8.58□□□□□ -1.04
CPSF1-205ENST00000531042 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
CPSF1-205ENST00000531042 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
CPSF1-205ENST00000531042 H7C2G1 150 aa8.57□□□□□ -1.04
CPSF1-205ENST00000531042 Q6ZVH6 145 aa8.57□□□□□ -1.04
CPSF1-205ENST00000531042 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
CPSF1-205ENST00000531042 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
CPSF1-205ENST00000531042 Q5XG85 94 aa8.56□□□□□ -1.04
CPSF1-205ENST00000531042 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
CPSF1-205ENST00000531042 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
CPSF1-205ENST00000531042 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
CPSF1-205ENST00000531042 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
CPSF1-205ENST00000531042 A0A0G2JQZ4 141 aa8.52□□□□□ -1.05
CPSF1-205ENST00000531042 A4D1N5 150 aa8.52□□□□□ -1.05
CPSF1-205ENST00000531042 UBE2V1Q13404 147 aa8.52□□□□□ -1.05
CPSF1-205ENST00000531042 VAMP3Q15836 100 aa8.52□□□□□ -1.05
CPSF1-205ENST00000531042 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
CPSF1-205ENST00000531042 K7ERJ3 54 aa8.51□□□□□ -1.05
CPSF1-205ENST00000531042 TRAV13-2A0A0B4J235 113 aa8.5□□□□□ -1.05
CPSF1-205ENST00000531042 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
CPSF1-205ENST00000531042 H3BUT2 72 aa8.5□□□□□ -1.05
CPSF1-205ENST00000531042 SMIM11BQ8TCY0 68 aa8.5□□□□□ -1.05
CPSF1-205ENST00000531042 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
CPSF1-205ENST00000531042 FABP2P12104 132 aa8.49□□□□□ -1.05
CPSF1-205ENST00000531042 MT1HP80294 61 aa8.49□□□□□ -1.05
CPSF1-205ENST00000531042 GTF2H5Q6ZYL4 71 aa8.49□□□□□ -1.05
CPSF1-205ENST00000531042 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
CPSF1-205ENST00000531042 K7EP34 96 aa8.47□□□□□ -1.05
CPSF1-205ENST00000531042 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
CPSF1-205ENST00000531042 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
CPSF1-205ENST00000531042 CFC1P0CG37 223 aa8.45□□□□□ -1.06
CPSF1-205ENST00000531042 FSIP2Q5CZC0 6907 aa8.44□□□□□ -1.06
CPSF1-205ENST00000531042 TCL1BO95988 128 aa8.44□□□□□ -1.06
CPSF1-205ENST00000531042 RPL37P61927 97 aaKnown RBP8.44□□□□□ -1.06
CPSF1-205ENST00000531042 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
CPSF1-205ENST00000531042 SPCS1Q9Y6A9 102 aa8.44□□□□□ -1.06
CPSF1-205ENST00000531042 NAA38Q9BRA0 125 aaKnown RBP8.43□□□□□ -1.06
CPSF1-205ENST00000531042 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
CPSF1-205ENST00000531042 F8WEM9 126 aa8.41□□□□□ -1.06
CPSF1-205ENST00000531042 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
CPSF1-205ENST00000531042 Q6ZQY7 126 aa8.39□□□□□ -1.07
CPSF1-205ENST00000531042 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
CPSF1-205ENST00000531042 TRBV20-1A0A075B6N2 111 aa8.37□□□□□ -1.07
CPSF1-205ENST00000531042 Q6JHZ5 121 aa8.37□□□□□ -1.07
CPSF1-205ENST00000531042 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
CPSF1-205ENST00000531042 CLEC2BQ92478 149 aa8.36□□□□□ -1.07
CPSF1-205ENST00000531042 TRBV7-7A0A0K0K1E9 115 aa8.35□□□□□ -1.07
CPSF1-205ENST00000531042 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
CPSF1-205ENST00000531042 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
CPSF1-205ENST00000531042 OCIAD2Q56VL3 154 aa8.34□□□□□ -1.07
CPSF1-205ENST00000531042 F8W1H4 67 aa8.32□□□□□ -1.08
CPSF1-205ENST00000531042 COX6CP09669 75 aa8.32□□□□□ -1.08
CPSF1-205ENST00000531042 PSMB2P49721 201 aa8.32□□□□□ -1.08
CPSF1-205ENST00000531042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.32□□□□□ -1.08
CPSF1-205ENST00000531042 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
CPSF1-205ENST00000531042 FLGP20930 4061 aaPredicted RBP8.32□□□□□ -1.08
CPSF1-205ENST00000531042 M0R2T5 61 aa8.31□□□□□ -1.08
CPSF1-205ENST00000531042 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
CPSF1-205ENST00000531042 H3BMG7 143 aa8.3□□□□□ -1.08
CPSF1-205ENST00000531042 PPDPFLQ8WWR9 84 aa8.3□□□□□ -1.08
CPSF1-205ENST00000531042 TRIAP1O43715 76 aa8.29□□□□□ -1.08
CPSF1-205ENST00000531042 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
CPSF1-205ENST00000531042 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
CPSF1-205ENST00000531042 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
CPSF1-205ENST00000531042 Q75L30 129 aa8.26□□□□□ -1.09
CPSF1-205ENST00000531042 LST1O00453 97 aa8.24□□□□□ -1.09
CPSF1-205ENST00000531042 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
CPSF1-205ENST00000531042 K7ERU9 68 aa8.23□□□□□ -1.09
CPSF1-205ENST00000531042 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-205ENST00000531042 Q6Q795 121 aa8.2□□□□□ -1.1
CPSF1-205ENST00000531042 C9JAW5 83 aa8.19□□□□□ -1.1
CPSF1-205ENST00000531042 H3BT86 120 aa8.19□□□□□ -1.1
CPSF1-205ENST00000531042 Q96NJ1 140 aa8.19□□□□□ -1.1
CPSF1-205ENST00000531042 SS18L2Q9UHA2 77 aa8.19□□□□□ -1.1
CPSF1-205ENST00000531042 H0YGX0 51 aa8.18□□□□□ -1.1
CPSF1-205ENST00000531042 SNCGO76070 127 aa8.18□□□□□ -1.1
CPSF1-205ENST00000531042 TRACP01848 142 aa8.18□□□□□ -1.1
CPSF1-205ENST00000531042 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
CPSF1-205ENST00000531042 J3QR89 54 aa8.17□□□□□ -1.1
CPSF1-205ENST00000531042 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
CPSF1-205ENST00000531042 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
CPSF1-205ENST00000531042 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
CPSF1-205ENST00000531042 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
CPSF1-205ENST00000531042 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
CPSF1-205ENST00000531042 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.1
CPSF1-205ENST00000531042 A0A1B0GX51 115 aa8.13□□□□□ -1.11
CPSF1-205ENST00000531042 A0A087WSZ3 146 aa8.12□□□□□ -1.11
CPSF1-205ENST00000531042 A8MUU9 505 aa8.12□□□□□ -1.11
CPSF1-205ENST00000531042 DNAL4O96015 105 aa8.09□□□□□ -1.11
CPSF1-205ENST00000531042 GHRHP01286 108 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms