RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.15■□□□□ 0.5
SSSCA1-205ENST00000527920 A0A0G2JQZ4 141 aa18.14■□□□□ 0.49
SSSCA1-205ENST00000527920 CFC1BP0CG36 223 aa18.12■□□□□ 0.49
SSSCA1-205ENST00000527920 CFC1P0CG37 223 aa18.12■□□□□ 0.49
SSSCA1-205ENST00000527920 PPDPFLQ8WWR9 84 aa18.12■□□□□ 0.49
SSSCA1-205ENST00000527920 IGLV8-61A0A075B6I0 122 aa18.11■□□□□ 0.49
SSSCA1-205ENST00000527920 C1orf195Q5TG92 126 aa18.1■□□□□ 0.49
SSSCA1-205ENST00000527920 Q6JHZ5 121 aa18.1■□□□□ 0.49
SSSCA1-205ENST00000527920 C2orf91Q6ZV80 131 aa18.1■□□□□ 0.49
SSSCA1-205ENST00000527920 A0A0B4J2C4 111 aa18.09■□□□□ 0.49
SSSCA1-205ENST00000527920 RAB37Q96AX2 223 aa18.08■□□□□ 0.48
SSSCA1-205ENST00000527920 TCL1BO95988 128 aa18.06■□□□□ 0.48
SSSCA1-205ENST00000527920 KRTAP4-1Q9BYQ7 146 aa18.06■□□□□ 0.48
SSSCA1-205ENST00000527920 CLEC2BQ92478 149 aa18.03■□□□□ 0.48
SSSCA1-205ENST00000527920 OCIAD2Q56VL3 154 aa18.02■□□□□ 0.48
SSSCA1-205ENST00000527920 C9orf92A6NGG3 77 aa18.01■□□□□ 0.47
SSSCA1-205ENST00000527920 H0YGX0 51 aa17.99■□□□□ 0.47
SSSCA1-205ENST00000527920 CEND1Q8N111 149 aa17.99■□□□□ 0.47
SSSCA1-205ENST00000527920 SNCGO76070 127 aa17.98■□□□□ 0.47
SSSCA1-205ENST00000527920 IGFL1Q6UW32 110 aa17.98■□□□□ 0.47
SSSCA1-205ENST00000527920 SNHG12Q9BXW3 62 aa17.97■□□□□ 0.47
SSSCA1-205ENST00000527920 TMEM238LA0A1B0GVL6 79 aa17.96■□□□□ 0.47
SSSCA1-205ENST00000527920 A6NJY4 79 aa17.96■□□□□ 0.47
SSSCA1-205ENST00000527920 TRBV7-7A0A0K0K1E9 115 aa17.94■□□□□ 0.46
SSSCA1-205ENST00000527920 PRO1854Q9UHT4 67 aa17.92■□□□□ 0.46
SSSCA1-205ENST00000527920 PYY3Q5JQD4 70 aa17.91■□□□□ 0.46
SSSCA1-205ENST00000527920 FAM218AQ96MZ4 157 aa17.88■□□□□ 0.45
SSSCA1-205ENST00000527920 A0A1B0GX51 115 aa17.87■□□□□ 0.45
SSSCA1-205ENST00000527920 FXYD2P54710 66 aa17.86■□□□□ 0.45
SSSCA1-205ENST00000527920 PCOTHQ58A44 107 aa17.86■□□□□ 0.45
SSSCA1-205ENST00000527920 H3BUT2 72 aa17.83■□□□□ 0.44
SSSCA1-205ENST00000527920 GHRHP01286 108 aa17.81■□□□□ 0.44
SSSCA1-205ENST00000527920 HSD52Q0P140 79 aa17.79■□□□□ 0.44
SSSCA1-205ENST00000527920 Q6Q795 121 aa17.78■□□□□ 0.44
SSSCA1-205ENST00000527920 NDUFV3P56181 108 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-205ENST00000527920 RPL37P61927 97 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-205ENST00000527920 TRIAP1O43715 76 aa17.75■□□□□ 0.43
SSSCA1-205ENST00000527920 SS18L2Q9UHA2 77 aa17.7■□□□□ 0.42
SSSCA1-205ENST00000527920 TEN1Q86WV5 123 aa17.69■□□□□ 0.42
SSSCA1-205ENST00000527920 TMA7Q9Y2S6 64 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-205ENST00000527920 LST1O00453 97 aa17.68■□□□□ 0.42
SSSCA1-205ENST00000527920 UQCR10Q9UDW1 63 aa17.67■□□□□ 0.42
SSSCA1-205ENST00000527920 H3BMG7 143 aa17.65■□□□□ 0.42
SSSCA1-205ENST00000527920 FABP2P12104 132 aa17.64■□□□□ 0.41
SSSCA1-205ENST00000527920 KRTAP19-2Q3LHN2 52 aa17.63■□□□□ 0.41
SSSCA1-205ENST00000527920 LCE2CQ5TA81 110 aa17.63■□□□□ 0.41
SSSCA1-205ENST00000527920 K7ERJ3 54 aa17.62■□□□□ 0.41
SSSCA1-205ENST00000527920 KRTAP9-2Q9BYQ4 174 aa17.62■□□□□ 0.41
SSSCA1-205ENST00000527920 H3BQ85 93 aa17.61■□□□□ 0.41
SSSCA1-205ENST00000527920 DNAL4O96015 105 aa17.59■□□□□ 0.41
SSSCA1-205ENST00000527920 COX6CP09669 75 aa17.59■□□□□ 0.41
SSSCA1-205ENST00000527920 PSMB2P49721 201 aa17.59■□□□□ 0.41
SSSCA1-205ENST00000527920 ORMDL1Q9P0S3 153 aa17.56■□□□□ 0.4
SSSCA1-205ENST00000527920 OBSCN-AS1Q96MR7 158 aa17.55■□□□□ 0.4
SSSCA1-205ENST00000527920 A0A087WSZ3 146 aa17.54■□□□□ 0.4
SSSCA1-205ENST00000527920 Q75L30 129 aa17.51■□□□□ 0.39
SSSCA1-205ENST00000527920 TMEM256-PLSCR3K7ERE1 68 aa17.49■□□□□ 0.39
SSSCA1-205ENST00000527920 A0A1W2PNM2 257 aa17.48■□□□□ 0.39
SSSCA1-205ENST00000527920 Q96NJ1 140 aa17.45■□□□□ 0.38
SSSCA1-205ENST00000527920 ANKRD29Q8N6D5 301 aa17.44■□□□□ 0.38
SSSCA1-205ENST00000527920 TRBV7-4A0A0J9YYF1 115 aa17.42■□□□□ 0.38
SSSCA1-205ENST00000527920 TRACP01848 142 aa17.41■□□□□ 0.38
SSSCA1-205ENST00000527920 MT1HP80294 61 aa17.4■□□□□ 0.38
SSSCA1-205ENST00000527920 ATP11AUNQ6ZP68 121 aa17.4■□□□□ 0.38
SSSCA1-205ENST00000527920 UBE2V1Q13404 147 aa17.39■□□□□ 0.37
SSSCA1-205ENST00000527920 C20orf166-AS1Q96NR2 134 aa17.35■□□□□ 0.37
SSSCA1-205ENST00000527920 SCGB1C2P0DMR2 95 aa17.32■□□□□ 0.36
SSSCA1-205ENST00000527920 A0A1B0GV72 72 aa17.31■□□□□ 0.36
SSSCA1-205ENST00000527920 A8MUU9 505 aa17.29■□□□□ 0.36
SSSCA1-205ENST00000527920 CCKP06307 115 aa17.28■□□□□ 0.36
SSSCA1-205ENST00000527920 SIGMAR1Q99720 223 aa17.28■□□□□ 0.36
SSSCA1-205ENST00000527920 M0R143 59 aa17.24■□□□□ 0.35
SSSCA1-205ENST00000527920 COX6B2Q6YFQ2 88 aa17.24■□□□□ 0.35
SSSCA1-205ENST00000527920 IGKV4-1P06312 121 aa17.21■□□□□ 0.35
SSSCA1-205ENST00000527920 RBM3P98179 157 aaKnown RBP17.2■□□□□ 0.34
SSSCA1-205ENST00000527920 LCE2DQ5TA82 110 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-205ENST00000527920 LINC00472Q9H8W2 130 aa17.2■□□□□ 0.34
SSSCA1-205ENST00000527920 SMIM6P0DI80 62 aa17.19■□□□□ 0.34
SSSCA1-205ENST00000527920 DSCR10P59022 87 aa17.19■□□□□ 0.34
SSSCA1-205ENST00000527920 DSCR8Q96T75 97 aa17.15■□□□□ 0.34
SSSCA1-205ENST00000527920 BAALC-AS2P0C853 105 aa17.14■□□□□ 0.33
SSSCA1-205ENST00000527920 LINC00313P59037 77 aa17.14■□□□□ 0.33
SSSCA1-205ENST00000527920 C21orf62-AS1Q17RA5 79 aa17.09■□□□□ 0.33
SSSCA1-205ENST00000527920 KRTAP16-1A8MUX0 517 aa17.08■□□□□ 0.32
SSSCA1-205ENST00000527920 ATXN8Q156A1 80 aa17.08■□□□□ 0.32
SSSCA1-205ENST00000527920 VPS25Q9BRG1 176 aa17.08■□□□□ 0.32
SSSCA1-205ENST00000527920 LORP23490 312 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-205ENST00000527920 KRTAP10-6P60371 365 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-205ENST00000527920 DEFB116Q30KQ4 102 aa17.06■□□□□ 0.32
SSSCA1-205ENST00000527920 C9JAW5 83 aa17.05■□□□□ 0.32
SSSCA1-205ENST00000527920 M0R2T5 61 aa17.05■□□□□ 0.32
SSSCA1-205ENST00000527920 FLGP20930 4061 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-205ENST00000527920 KRTAP9-6A0A140TA67 174 aa17.02■□□□□ 0.32
SSSCA1-205ENST00000527920 NOTCH2NLQ7Z3S9 236 aa17.01■□□□□ 0.31
SSSCA1-205ENST00000527920 NAA38Q9BRA0 125 aaKnown RBP17■□□□□ 0.31
SSSCA1-205ENST00000527920 IGHV6-1A0A0B4J1U7 121 aa16.98■□□□□ 0.31
SSSCA1-205ENST00000527920 JMJD7-PLA2G4BH0Y9G9 81 aa16.98■□□□□ 0.31
SSSCA1-205ENST00000527920 C8orf87E5RJ46 101 aa16.95■□□□□ 0.3
SSSCA1-205ENST00000527920 TSTD3H0UI37 97 aa16.95■□□□□ 0.3
SSSCA1-205ENST00000527920 LYRM7Q5U5X0 104 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms