RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
CSTF3-204ENST00000524556 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
CSTF3-204ENST00000524556 MT1FP04733 61 aa7.42□□□□□ -1.22
CSTF3-204ENST00000524556 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
CSTF3-204ENST00000524556 KRTAP9-3Q9BYQ3 159 aa7.42□□□□□ -1.22
CSTF3-204ENST00000524556 A8MUU9 505 aa7.41□□□□□ -1.22
CSTF3-204ENST00000524556 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
CSTF3-204ENST00000524556 Q6ZVH6 145 aa7.41□□□□□ -1.22
CSTF3-204ENST00000524556 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
CSTF3-204ENST00000524556 SLC7A5P1Q8MH63 180 aa7.41□□□□□ -1.22
CSTF3-204ENST00000524556 TRAV13-2A0A0B4J235 113 aa7.4□□□□□ -1.22
CSTF3-204ENST00000524556 LST1O00453 97 aa7.4□□□□□ -1.22
CSTF3-204ENST00000524556 VAMP3Q15836 100 aa7.39□□□□□ -1.23
CSTF3-204ENST00000524556 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
CSTF3-204ENST00000524556 Q6ZQY7 126 aa7.39□□□□□ -1.23
CSTF3-204ENST00000524556 COLCA2A8K830 154 aa7.37□□□□□ -1.23
CSTF3-204ENST00000524556 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
CSTF3-204ENST00000524556 hADV29S1A0JD25 119 aa7.36□□□□□ -1.23
CSTF3-204ENST00000524556 FAM236DA0A1B0GTK5 79 aa7.34□□□□□ -1.23
CSTF3-204ENST00000524556 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
CSTF3-204ENST00000524556 FAM236CP0DP71 79 aa7.34□□□□□ -1.23
CSTF3-204ENST00000524556 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
CSTF3-204ENST00000524556 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
CSTF3-204ENST00000524556 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 LINC00846Q9NV44 126 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 SS18L2Q9UHA2 77 aa7.31□□□□□ -1.24
CSTF3-204ENST00000524556 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
CSTF3-204ENST00000524556 H3BUT2 72 aa7.3□□□□□ -1.24
CSTF3-204ENST00000524556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
CSTF3-204ENST00000524556 PPDPFLQ8WWR9 84 aa7.3□□□□□ -1.24
CSTF3-204ENST00000524556 SNHG12Q9BXW3 62 aa7.3□□□□□ -1.24
CSTF3-204ENST00000524556 SCGB1D1O95968 90 aa7.28□□□□□ -1.24
CSTF3-204ENST00000524556 KRTDAPP60985 99 aa7.28□□□□□ -1.24
CSTF3-204ENST00000524556 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
CSTF3-204ENST00000524556 MPLKIPQ8TAP9 179 aa7.28□□□□□ -1.24
CSTF3-204ENST00000524556 DSCR10P59022 87 aa7.27□□□□□ -1.25
CSTF3-204ENST00000524556 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
CSTF3-204ENST00000524556 HRES1P13985 223 aa7.26□□□□□ -1.25
CSTF3-204ENST00000524556 ATOH7Q8N100 152 aa7.25□□□□□ -1.25
CSTF3-204ENST00000524556 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
CSTF3-204ENST00000524556 A0A087WSZ3 146 aa7.21□□□□□ -1.26
CSTF3-204ENST00000524556 BVES-AS1Q5T3Y7 98 aa7.2□□□□□ -1.26
CSTF3-204ENST00000524556 LINC00313P59037 77 aa7.19□□□□□ -1.26
CSTF3-204ENST00000524556 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
CSTF3-204ENST00000524556 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
CSTF3-204ENST00000524556 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
CSTF3-204ENST00000524556 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
CSTF3-204ENST00000524556 C12orf57Q99622 126 aa7.17□□□□□ -1.26
CSTF3-204ENST00000524556 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
CSTF3-204ENST00000524556 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
CSTF3-204ENST00000524556 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
CSTF3-204ENST00000524556 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
CSTF3-204ENST00000524556 H3BMG7 143 aa7.11□□□□□ -1.27
CSTF3-204ENST00000524556 SNCGO76070 127 aa7.11□□□□□ -1.27
CSTF3-204ENST00000524556 A0A1W2PNM2 257 aa7.1□□□□□ -1.27
CSTF3-204ENST00000524556 H0YGX0 51 aa7.07□□□□□ -1.28
CSTF3-204ENST00000524556 FAM218AQ96MZ4 157 aa7.07□□□□□ -1.28
CSTF3-204ENST00000524556 A8MWP4 228 aa7.06□□□□□ -1.28
CSTF3-204ENST00000524556 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
CSTF3-204ENST00000524556 NEBP20929 6669 aa7.05□□□□□ -1.28
CSTF3-204ENST00000524556 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
CSTF3-204ENST00000524556 IGHV6-1A0A0B4J1U7 121 aa7.04□□□□□ -1.28
CSTF3-204ENST00000524556 FABP2P12104 132 aa7.04□□□□□ -1.28
CSTF3-204ENST00000524556 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
CSTF3-204ENST00000524556 GHRHP01286 108 aa7.03□□□□□ -1.28
CSTF3-204ENST00000524556 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
CSTF3-204ENST00000524556 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
CSTF3-204ENST00000524556 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
CSTF3-204ENST00000524556 SPINK7P58062 85 aa7.01□□□□□ -1.29
CSTF3-204ENST00000524556 ANKRD29Q8N6D5 301 aa7.01□□□□□ -1.29
CSTF3-204ENST00000524556 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
CSTF3-204ENST00000524556 A0A1B0GX51 115 aa7□□□□□ -1.29
CSTF3-204ENST00000524556 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
CSTF3-204ENST00000524556 RAB37Q96AX2 223 aa7□□□□□ -1.29
CSTF3-204ENST00000524556 C8orf87E5RJ46 101 aa6.97□□□□□ -1.29
CSTF3-204ENST00000524556 A0A0B4J2C4 111 aa6.96□□□□□ -1.3
CSTF3-204ENST00000524556 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
CSTF3-204ENST00000524556 A0A1B0GV72 72 aa6.94□□□□□ -1.3
CSTF3-204ENST00000524556 COX8AP10176 69 aa6.94□□□□□ -1.3
CSTF3-204ENST00000524556 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
CSTF3-204ENST00000524556 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
CSTF3-204ENST00000524556 TRACP01848 142 aa6.92□□□□□ -1.3
CSTF3-204ENST00000524556 CCKP06307 115 aa6.92□□□□□ -1.3
CSTF3-204ENST00000524556 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
CSTF3-204ENST00000524556 DLEU1O43261 78 aa6.91□□□□□ -1.3
CSTF3-204ENST00000524556 S100A2P29034 98 aa6.91□□□□□ -1.3
CSTF3-204ENST00000524556 H3BQ85 93 aa6.89□□□□□ -1.31
CSTF3-204ENST00000524556 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
CSTF3-204ENST00000524556 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms