RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
SKP1-212ENST00000523966 SPANXDQ9BXN6 97 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 NHP2Q9NX24 153 aaKnown RBP1.5□□□□□ -2.17
SKP1-212ENST00000523966 SPANXCQ9NY87 97 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 PRO1854Q9UHT4 67 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 TRBV20-1A0A075B6N2 111 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
SKP1-212ENST00000523966 TRAV13-2A0A0B4J235 113 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 TRBV30A0A0K0K1B3 111 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 A0A1B0GV72 72 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 TAX1BP3O14907 124 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 IGHV3-33P01772 117 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 FXYD2P54710 66 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 SPAG11BQ08648 103 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 CLPSL2Q6UWE3 100 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 ENHOQ6UWT2 76 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 WFDC10BQ8IUB3 73 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 MUSTN1Q8IVN3 82 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 UBE2DNLQ8IWF7 75 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 SMIM20Q8N5G0 67 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 LINC00308Q8TCZ7 52 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 SIGMAR1Q99720 223 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 ERG28Q9UKR5 140 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 PKIGQ9Y2B9 76 aa1.49□□□□□ -2.17
SKP1-212ENST00000523966 LOC107984156A0A0G2JMH3 177 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 A0A1B0GV90 55 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 A0A1W2PPM0 123 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 H3BUT2 72 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 SNCGO76070 127 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 NDUFC2O95298 119 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 HIST1H4AP62805 103 aaKnown RBP1.48□□□□□ -2.17
SKP1-212ENST00000523966 ARL17AQ8IVW1 177 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 XAGE1AQ9HD64 81 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 APLNQ9ULZ1 77 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 SPCS1Q9Y6A9 102 aa1.48□□□□□ -2.17
SKP1-212ENST00000523966 TRBV10-2A0A0K0K1G8 114 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 FAM236DA0A1B0GTK5 79 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 F8W1H4 67 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 H0YGX0 51 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 K7EP34 96 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 K7ERJ3 54 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 FAM236CP0DP71 79 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 ATXN8Q156A1 80 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 TPRXLQ17RH7 258 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 C2orf82Q6UX34 121 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 UNQ6190/PRO20217Q6UXQ8 127 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 TMEM126AQ9H061 195 aa1.47□□□□□ -2.17
SKP1-212ENST00000523966 NBDYA0A0U1RRE5 68 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 H3BT86 120 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 H7C2G1 150 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 J3QR89 54 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 RPL28P46779 137 aaKnown RBP1.46□□□□□ -2.18
SKP1-212ENST00000523966 S100A7L2Q5SY68 101 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 COA5Q86WW8 74 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 OR13C6PQ8NH95 151 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 CARD19Q96LW7 228 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 LINC00474Q9P2X8 69 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 SS18L2Q9UHA2 77 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 ANK2Q01484 3957 aa1.46□□□□□ -2.18
SKP1-212ENST00000523966 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 TENM2Q9NT68 2774 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 TRBV7-6A0A0J9YX20 115 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 LOC107984640A0A0U1RRK4 108 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 A0A1B0GX51 115 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 H3BMG7 143 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 K7ERU9 68 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 M0R378 163 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 LST1O00453 97 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 DNAL4O96015 105 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 TRACP01848 142 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 NPC2P61916 151 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 CNBPP62633 177 aaKnown RBP1.45□□□□□ -2.18
SKP1-212ENST00000523966 C9orf116Q5BN46 136 aaPredicted RBP1.45□□□□□ -2.18
SKP1-212ENST00000523966 SOSTDC1Q6X4U4 206 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 LINC01600Q96MT4 127 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
SKP1-212ENST00000523966 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 TGP01266 2768 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 COL7A1Q02388 2944 aa1.45□□□□□ -2.18
SKP1-212ENST00000523966 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 TRAV7A0A075B6U4 112 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 C9JAW5 83 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 TCL1BO95988 128 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 SCGB1A1P11684 91 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 OCIAD2Q56VL3 154 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 C1orf134Q5TEV5 83 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 ANKRD29Q8N6D5 301 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 SMIM11BQ8TCY0 68 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 DIRC1Q969H9 104 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 LINC00526Q96FQ7 95 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
SKP1-212ENST00000523966 CMYA5Q8N3K9 4069 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 TRAV23DV6A0A075B6W5 121 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 TRBV10-3A0A0K0K1G6 114 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 hADV29S1A0JD25 119 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 TMEM256-PLSCR3K7ERE1 68 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms