RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
IKBKB-228ENST00000523517 UBE2AP49459 152 aa11.17□□□□□ -0.62
IKBKB-228ENST00000523517 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
IKBKB-228ENST00000523517 A0A087WSZ3 146 aa11.17□□□□□ -0.62
IKBKB-228ENST00000523517 DNAH10Q8IVF4 4471 aa11.16□□□□□ -0.62
IKBKB-228ENST00000523517 DEFB116Q30KQ4 102 aa11.16□□□□□ -0.62
IKBKB-228ENST00000523517 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
IKBKB-228ENST00000523517 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
IKBKB-228ENST00000523517 H0Y9J4 135 aa11.13□□□□□ -0.63
IKBKB-228ENST00000523517 ZCCHC13Q8WW36 166 aaKnown RBP11.13□□□□□ -0.63
IKBKB-228ENST00000523517 SPRR1BP22528 89 aa11.12□□□□□ -0.63
IKBKB-228ENST00000523517 FAM229BQ4G0N7 80 aa11.1□□□□□ -0.63
IKBKB-228ENST00000523517 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
IKBKB-228ENST00000523517 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
IKBKB-228ENST00000523517 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
IKBKB-228ENST00000523517 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
IKBKB-228ENST00000523517 LYSTQ99698 3801 aa11.07□□□□□ -0.64
IKBKB-228ENST00000523517 RPL37AP61513 92 aaKnown RBP11.06□□□□□ -0.64
IKBKB-228ENST00000523517 PKIGQ9Y2B9 76 aa11.05□□□□□ -0.64
IKBKB-228ENST00000523517 B9D2Q9BPU9 175 aa11.04□□□□□ -0.64
IKBKB-228ENST00000523517 NBDYA0A0U1RRE5 68 aa11.03□□□□□ -0.64
IKBKB-228ENST00000523517 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
IKBKB-228ENST00000523517 LINC00336Q6ZUF6 198 aa11.03□□□□□ -0.64
IKBKB-228ENST00000523517 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
IKBKB-228ENST00000523517 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.64
IKBKB-228ENST00000523517 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.65
IKBKB-228ENST00000523517 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
IKBKB-228ENST00000523517 PANO1I0J062 215 aa11.01□□□□□ -0.65
IKBKB-228ENST00000523517 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
IKBKB-228ENST00000523517 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
IKBKB-228ENST00000523517 Q6ZRN7 208 aaPredicted RBP10.99□□□□□ -0.65
IKBKB-228ENST00000523517 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
IKBKB-228ENST00000523517 KRTAP13-1Q8IUC0 172 aa10.99□□□□□ -0.65
IKBKB-228ENST00000523517 A8MWP4 228 aa10.98□□□□□ -0.65
IKBKB-228ENST00000523517 MP68P56378 58 aa10.98□□□□□ -0.65
IKBKB-228ENST00000523517 CASC2Q6XLA1 102 aa10.98□□□□□ -0.65
IKBKB-228ENST00000523517 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
IKBKB-228ENST00000523517 MDFIQ99750 246 aa10.97□□□□□ -0.65
IKBKB-228ENST00000523517 COL7A1Q02388 2944 aa10.97□□□□□ -0.65
IKBKB-228ENST00000523517 NDUFB1O75438 58 aa10.95□□□□□ -0.66
IKBKB-228ENST00000523517 PRO0628Q9UI54 55 aa10.95□□□□□ -0.66
IKBKB-228ENST00000523517 NUPR2A6NF83 97 aa10.94□□□□□ -0.66
IKBKB-228ENST00000523517 CYP4F30PQ9H0H9 118 aa10.94□□□□□ -0.66
IKBKB-228ENST00000523517 LINC00208Q96KT6 92 aa10.92□□□□□ -0.66
IKBKB-228ENST00000523517 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
IKBKB-228ENST00000523517 SPACA4Q8TDM5 124 aa10.92□□□□□ -0.66
IKBKB-228ENST00000523517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
IKBKB-228ENST00000523517 SRRM2Q9UQ35 2752 aaKnown RBP10.91□□□□□ -0.66
IKBKB-228ENST00000523517 PRR4Q16378 134 aa10.91□□□□□ -0.66
IKBKB-228ENST00000523517 H0Y9P7 68 aa10.9□□□□□ -0.66
IKBKB-228ENST00000523517 DNAH7Q8WXX0 4024 aa10.9□□□□□ -0.66
IKBKB-228ENST00000523517 H3BPC8 53 aa10.88□□□□□ -0.67
IKBKB-228ENST00000523517 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
IKBKB-228ENST00000523517 IGLV9-49A0A0B4J1Y8 123 aa10.87□□□□□ -0.67
IKBKB-228ENST00000523517 MMP24-AS1A0A0U1RRL7 71 aa10.85□□□□□ -0.67
IKBKB-228ENST00000523517 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
IKBKB-228ENST00000523517 A0A087WTM6 91 aa10.84□□□□□ -0.67
IKBKB-228ENST00000523517 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
IKBKB-228ENST00000523517 Q1T7F1 81 aa10.83□□□□□ -0.68
IKBKB-228ENST00000523517 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
IKBKB-228ENST00000523517 BRK1Q8WUW1 75 aa10.83□□□□□ -0.68
IKBKB-228ENST00000523517 Q96NJ1 140 aa10.83□□□□□ -0.68
IKBKB-228ENST00000523517 SPANXA2-OT1Q8N9U9 137 aa10.81□□□□□ -0.68
IKBKB-228ENST00000523517 ZNF706Q9Y5V0 76 aaPredicted RBP10.79□□□□□ -0.68
IKBKB-228ENST00000523517 RTL8CO15255 209 aa10.77□□□□□ -0.69
IKBKB-228ENST00000523517 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
IKBKB-228ENST00000523517 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.69
IKBKB-228ENST00000523517 MOBPQ13875 183 aa10.76□□□□□ -0.69
IKBKB-228ENST00000523517 ASB16-AS1Q495Z4 193 aa10.76□□□□□ -0.69
IKBKB-228ENST00000523517 IGLV5-52A0A0A0MRZ9 124 aa10.76□□□□□ -0.69
IKBKB-228ENST00000523517 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
IKBKB-228ENST00000523517 C8orf17Q9NRJ1 99 aa10.73□□□□□ -0.69
IKBKB-228ENST00000523517 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
IKBKB-228ENST00000523517 TP53AIP1Q9HCN2 124 aa10.72□□□□□ -0.69
IKBKB-228ENST00000523517 ZNF861PO60384 105 aa10.71□□□□□ -0.69
IKBKB-228ENST00000523517 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
IKBKB-228ENST00000523517 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
IKBKB-228ENST00000523517 Q6ZR54 194 aa10.69□□□□□ -0.7
IKBKB-228ENST00000523517 STARD9Q9P2P6 4700 aa10.69□□□□□ -0.7
IKBKB-228ENST00000523517 PSPHP1O15172 72 aa10.69□□□□□ -0.7
IKBKB-228ENST00000523517 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
IKBKB-228ENST00000523517 V9GYY9 64 aa10.67□□□□□ -0.7
IKBKB-228ENST00000523517 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
IKBKB-228ENST00000523517 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
IKBKB-228ENST00000523517 PRKDCP78527 4128 aaKnown RBP10.63□□□□□ -0.71
IKBKB-228ENST00000523517 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
IKBKB-228ENST00000523517 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
IKBKB-228ENST00000523517 NDUFS5O43920 106 aa10.62□□□□□ -0.71
IKBKB-228ENST00000523517 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
IKBKB-228ENST00000523517 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
IKBKB-228ENST00000523517 A8MUN3 132 aa10.61□□□□□ -0.71
IKBKB-228ENST00000523517 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
IKBKB-228ENST00000523517 CD164Q04900 197 aa10.6□□□□□ -0.71
IKBKB-228ENST00000523517 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
IKBKB-228ENST00000523517 A0A087X002 238 aa10.59□□□□□ -0.71
IKBKB-228ENST00000523517 NOTCH2NLQ7Z3S9 236 aa10.59□□□□□ -0.71
IKBKB-228ENST00000523517 Q8N9P0 234 aaPredicted RBP10.59□□□□□ -0.71
IKBKB-228ENST00000523517 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
IKBKB-228ENST00000523517 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
IKBKB-228ENST00000523517 COA5Q86WW8 74 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms