RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ACYP1P07311 99 aa5.4□□□□□ -1.54
SDC2-207ENST00000522911 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
SDC2-207ENST00000522911 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
SDC2-207ENST00000522911 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 M0R378 163 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 TRIAP1O43715 76 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 RETNLBQ9BQ08 111 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SDC2-207ENST00000522911 LST1O00453 97 aa5.38□□□□□ -1.55
SDC2-207ENST00000522911 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
SDC2-207ENST00000522911 SND1-IT1Q9HBX3 110 aa5.38□□□□□ -1.55
SDC2-207ENST00000522911 PRLHP81277 87 aa5.37□□□□□ -1.55
SDC2-207ENST00000522911 FAM19A1Q7Z5A9 133 aa5.37□□□□□ -1.55
SDC2-207ENST00000522911 ANAPC13Q9BS18 74 aa5.37□□□□□ -1.55
SDC2-207ENST00000522911 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
SDC2-207ENST00000522911 TRACP01848 142 aa5.36□□□□□ -1.55
SDC2-207ENST00000522911 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
SDC2-207ENST00000522911 LINC00308Q8TCZ7 52 aa5.36□□□□□ -1.55
SDC2-207ENST00000522911 PFN2P35080 140 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 MEIG1Q5JSS6 88 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 ZNF625Q96I27 306 aaPredicted RBP5.35□□□□□ -1.55
SDC2-207ENST00000522911 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
SDC2-207ENST00000522911 Q8NDZ9 215 aa5.34□□□□□ -1.55
SDC2-207ENST00000522911 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
SDC2-207ENST00000522911 SPINK1P00995 79 aa5.33□□□□□ -1.56
SDC2-207ENST00000522911 SPRR1AP35321 89 aa5.33□□□□□ -1.56
SDC2-207ENST00000522911 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
SDC2-207ENST00000522911 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SDC2-207ENST00000522911 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
SDC2-207ENST00000522911 H0YGX0 51 aa5.32□□□□□ -1.56
SDC2-207ENST00000522911 NDUFV3P56181 108 aaKnown RBP5.32□□□□□ -1.56
SDC2-207ENST00000522911 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
SDC2-207ENST00000522911 KRTAP4-16G5E9R7 235 aaPredicted RBP5.31□□□□□ -1.56
SDC2-207ENST00000522911 PRYO14603 147 aa5.31□□□□□ -1.56
SDC2-207ENST00000522911 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
SDC2-207ENST00000522911 HIGD2AQ9BW72 106 aa5.31□□□□□ -1.56
SDC2-207ENST00000522911 KCNQ1DNQ9H478 68 aa5.31□□□□□ -1.56
SDC2-207ENST00000522911 TRBV7-7A0A0K0K1E9 115 aa5.3□□□□□ -1.56
SDC2-207ENST00000522911 NPC2P61916 151 aa5.3□□□□□ -1.56
SDC2-207ENST00000522911 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
SDC2-207ENST00000522911 DAND5Q8N907 189 aa5.3□□□□□ -1.56
SDC2-207ENST00000522911 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
SDC2-207ENST00000522911 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
SDC2-207ENST00000522911 BAALC-AS2P0C853 105 aa5.29□□□□□ -1.56
SDC2-207ENST00000522911 DNAL4O96015 105 aa5.28□□□□□ -1.56
SDC2-207ENST00000522911 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
SDC2-207ENST00000522911 Q8NBF4 154 aa5.28□□□□□ -1.56
SDC2-207ENST00000522911 A0A1B0GX51 115 aa5.27□□□□□ -1.57
SDC2-207ENST00000522911 LINC01547P58512 204 aaPredicted RBP5.27□□□□□ -1.57
SDC2-207ENST00000522911 LINC00158P58513 81 aa5.27□□□□□ -1.57
SDC2-207ENST00000522911 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
SDC2-207ENST00000522911 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
SDC2-207ENST00000522911 Q8N377 158 aa5.26□□□□□ -1.57
SDC2-207ENST00000522911 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
SDC2-207ENST00000522911 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
SDC2-207ENST00000522911 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
SDC2-207ENST00000522911 A0A0U1RRA0 63 aa5.24□□□□□ -1.57
SDC2-207ENST00000522911 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
SDC2-207ENST00000522911 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
SDC2-207ENST00000522911 TRBV10-3A0A0K0K1G6 114 aa5.23□□□□□ -1.57
SDC2-207ENST00000522911 B5MCH6 92 aa5.23□□□□□ -1.57
SDC2-207ENST00000522911 H3BQ85 93 aa5.23□□□□□ -1.57
SDC2-207ENST00000522911 H3BS24 57 aa5.22□□□□□ -1.57
SDC2-207ENST00000522911 NDUFC2O95298 119 aa5.22□□□□□ -1.57
SDC2-207ENST00000522911 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
SDC2-207ENST00000522911 JMJD7-PLA2G4BH0Y9G9 81 aa5.21□□□□□ -1.58
SDC2-207ENST00000522911 Q6ZRX8 168 aa5.21□□□□□ -1.58
SDC2-207ENST00000522911 Q9BRP9 147 aa5.21□□□□□ -1.58
SDC2-207ENST00000522911 ORMDL1Q9P0S3 153 aa5.21□□□□□ -1.58
SDC2-207ENST00000522911 NCR3O14931 201 aa5.2□□□□□ -1.58
SDC2-207ENST00000522911 MOBPQ13875 183 aa5.2□□□□□ -1.58
SDC2-207ENST00000522911 GAGE2AQ6NT46 116 aa5.2□□□□□ -1.58
SDC2-207ENST00000522911 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
SDC2-207ENST00000522911 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
SDC2-207ENST00000522911 TMEM256-PLSCR3K7ERE1 68 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 ATOX1O00244 68 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 UQCRQO14949 82 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 IGLV6-57P01721 117 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 ATP5EP2Q5VTU8 51 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 Q6JHZ5 121 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 FAM218AQ96MZ4 157 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
SDC2-207ENST00000522911 FAM236AA0A1B0GUQ0 79 aa5.18□□□□□ -1.58
SDC2-207ENST00000522911 FAM236BA0A1B0GV22 79 aa5.18□□□□□ -1.58
SDC2-207ENST00000522911 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
SDC2-207ENST00000522911 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
SDC2-207ENST00000522911 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
SDC2-207ENST00000522911 IGLV9-49A0A0B4J1Y8 123 aa5.17□□□□□ -1.58
SDC2-207ENST00000522911 CCKP06307 115 aa5.16□□□□□ -1.58
SDC2-207ENST00000522911 COX7CP15954 63 aa5.15□□□□□ -1.59
SDC2-207ENST00000522911 PDE6GP18545 87 aa5.15□□□□□ -1.59
SDC2-207ENST00000522911 SPRR1BP22528 89 aa5.15□□□□□ -1.59
SDC2-207ENST00000522911 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms