RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 FXYD2P54710 66 aa8.12□□□□□ -1.11
TRAPPC9-213ENST00000522504 LAMTOR3Q9UHA4 124 aa8.12□□□□□ -1.11
TRAPPC9-213ENST00000522504 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
TRAPPC9-213ENST00000522504 A6NJY4 79 aa8.11□□□□□ -1.11
TRAPPC9-213ENST00000522504 HINT1P49773 126 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC9-213ENST00000522504 Q1RN00 199 aa8.11□□□□□ -1.11
TRAPPC9-213ENST00000522504 OR13C6PQ8NH95 151 aa8.11□□□□□ -1.11
TRAPPC9-213ENST00000522504 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 CD164Q04900 197 aa8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
TRAPPC9-213ENST00000522504 M0R143 59 aa8.09□□□□□ -1.11
TRAPPC9-213ENST00000522504 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 A6NDN8 102 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 PCP4L1A6NKN8 68 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 DEFB105AQ8NG35 78 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
TRAPPC9-213ENST00000522504 USH2AO75445 5202 aa8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 CFC1P0CG37 223 aa8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 Q5XG85 94 aa8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 SMIM29Q86T20 159 aa8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 NHP2Q9NX24 153 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-213ENST00000522504 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
TRAPPC9-213ENST00000522504 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
TRAPPC9-213ENST00000522504 COX7BP24311 80 aa8.05□□□□□ -1.12
TRAPPC9-213ENST00000522504 BATFQ16520 125 aa8.05□□□□□ -1.12
TRAPPC9-213ENST00000522504 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
TRAPPC9-213ENST00000522504 K7ERJ3 54 aa8.04□□□□□ -1.12
TRAPPC9-213ENST00000522504 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
TRAPPC9-213ENST00000522504 PRO1854Q9UHT4 67 aa8.02□□□□□ -1.13
TRAPPC9-213ENST00000522504 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
TRAPPC9-213ENST00000522504 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
TRAPPC9-213ENST00000522504 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
TRAPPC9-213ENST00000522504 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
TRAPPC9-213ENST00000522504 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
TRAPPC9-213ENST00000522504 SNHG12Q9BXW3 62 aa7.97□□□□□ -1.13
TRAPPC9-213ENST00000522504 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
TRAPPC9-213ENST00000522504 PSMB2P49721 201 aa7.94□□□□□ -1.14
TRAPPC9-213ENST00000522504 VAMP3Q15836 100 aa7.93□□□□□ -1.14
TRAPPC9-213ENST00000522504 Q6Q795 121 aa7.93□□□□□ -1.14
TRAPPC9-213ENST00000522504 TRIAP1O43715 76 aa7.92□□□□□ -1.14
TRAPPC9-213ENST00000522504 FCGBPQ9Y6R7 5405 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC9-213ENST00000522504 NAA38Q9BRA0 125 aaKnown RBP7.91□□□□□ -1.14
TRAPPC9-213ENST00000522504 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
TRAPPC9-213ENST00000522504 TCL1BO95988 128 aa7.9□□□□□ -1.14
TRAPPC9-213ENST00000522504 TAX1BP3O14907 124 aa7.89□□□□□ -1.15
TRAPPC9-213ENST00000522504 COX6CP09669 75 aa7.89□□□□□ -1.15
TRAPPC9-213ENST00000522504 COL5A1-AS1Q5SY13 56 aa7.89□□□□□ -1.15
TRAPPC9-213ENST00000522504 H0YGX0 51 aa7.88□□□□□ -1.15
TRAPPC9-213ENST00000522504 H3BUT2 72 aa7.87□□□□□ -1.15
TRAPPC9-213ENST00000522504 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
TRAPPC9-213ENST00000522504 OBSCN-AS1Q96MR7 158 aa7.87□□□□□ -1.15
TRAPPC9-213ENST00000522504 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
TRAPPC9-213ENST00000522504 LINC00575Q6W349 94 aa7.86□□□□□ -1.15
TRAPPC9-213ENST00000522504 CLEC2BQ92478 149 aa7.86□□□□□ -1.15
TRAPPC9-213ENST00000522504 Q75L30 129 aa7.85□□□□□ -1.15
TRAPPC9-213ENST00000522504 FAM218AQ96MZ4 157 aa7.85□□□□□ -1.15
TRAPPC9-213ENST00000522504 hADV29S1A0JD25 119 aa7.84□□□□□ -1.15
TRAPPC9-213ENST00000522504 ATP11AUNQ6ZP68 121 aa7.84□□□□□ -1.15
TRAPPC9-213ENST00000522504 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
TRAPPC9-213ENST00000522504 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
TRAPPC9-213ENST00000522504 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
TRAPPC9-213ENST00000522504 SNCGO76070 127 aa7.81□□□□□ -1.16
TRAPPC9-213ENST00000522504 IGFL1Q6UW32 110 aa7.81□□□□□ -1.16
TRAPPC9-213ENST00000522504 A0A1B0GX51 115 aa7.8□□□□□ -1.16
TRAPPC9-213ENST00000522504 Q6ZQY7 126 aa7.8□□□□□ -1.16
TRAPPC9-213ENST00000522504 F8WEM9 126 aa7.79□□□□□ -1.16
TRAPPC9-213ENST00000522504 LST1O00453 97 aa7.79□□□□□ -1.16
TRAPPC9-213ENST00000522504 DNAL4O96015 105 aa7.79□□□□□ -1.16
TRAPPC9-213ENST00000522504 FABP2P12104 132 aa7.79□□□□□ -1.16
TRAPPC9-213ENST00000522504 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
TRAPPC9-213ENST00000522504 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC9-213ENST00000522504 Q6JHZ5 121 aa7.77□□□□□ -1.17
TRAPPC9-213ENST00000522504 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
TRAPPC9-213ENST00000522504 TRACP01848 142 aa7.76□□□□□ -1.17
TRAPPC9-213ENST00000522504 Q96NJ1 140 aa7.76□□□□□ -1.17
TRAPPC9-213ENST00000522504 MT2AP02795 61 aa7.75□□□□□ -1.17
TRAPPC9-213ENST00000522504 OCIAD2Q56VL3 154 aa7.75□□□□□ -1.17
TRAPPC9-213ENST00000522504 SPCS1Q9Y6A9 102 aa7.75□□□□□ -1.17
TRAPPC9-213ENST00000522504 ORMDL1Q9P0S3 153 aa7.74□□□□□ -1.17
TRAPPC9-213ENST00000522504 LCE2BO14633 110 aa7.73□□□□□ -1.17
TRAPPC9-213ENST00000522504 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
TRAPPC9-213ENST00000522504 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
TRAPPC9-213ENST00000522504 A8MUU9 505 aa7.71□□□□□ -1.18
TRAPPC9-213ENST00000522504 GHRHP01286 108 aa7.71□□□□□ -1.18
TRAPPC9-213ENST00000522504 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
TRAPPC9-213ENST00000522504 MACF1Q9UPN3 7388 aaKnown RBP7.7□□□□□ -1.18
TRAPPC9-213ENST00000522504 H3BMG7 143 aa7.7□□□□□ -1.18
TRAPPC9-213ENST00000522504 K7EP34 96 aa7.7□□□□□ -1.18
TRAPPC9-213ENST00000522504 MT1FP04733 61 aa7.7□□□□□ -1.18
TRAPPC9-213ENST00000522504 C9JAW5 83 aa7.69□□□□□ -1.18
TRAPPC9-213ENST00000522504 H3BQ85 93 aa7.68□□□□□ -1.18
TRAPPC9-213ENST00000522504 SYNE2Q8WXH0 6885 aaKnown RBP7.68□□□□□ -1.18
TRAPPC9-213ENST00000522504 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
TRAPPC9-213ENST00000522504 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 335 ms