RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TRACP01848 142 aa5.57□□□□□ -1.52
CTNNA1-221ENST00000520339 Q5XG85 94 aa5.57□□□□□ -1.52
CTNNA1-221ENST00000520339 HIST1H4GQ99525 98 aa5.57□□□□□ -1.52
CTNNA1-221ENST00000520339 LPAP08519 4548 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 IGLV1-50A0A075B6I6 118 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 ATOX1O00244 68 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 UBE2BP63146 152 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
CTNNA1-221ENST00000520339 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
CTNNA1-221ENST00000520339 NDUFC2O95298 119 aa5.55□□□□□ -1.52
CTNNA1-221ENST00000520339 C1orf195Q5TG92 126 aa5.55□□□□□ -1.52
CTNNA1-221ENST00000520339 SFTA2Q6UW10 78 aa5.55□□□□□ -1.52
CTNNA1-221ENST00000520339 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
CTNNA1-221ENST00000520339 TIMM17BO60830 172 aa5.54□□□□□ -1.52
CTNNA1-221ENST00000520339 Q8IZM0 81 aa5.54□□□□□ -1.52
CTNNA1-221ENST00000520339 ZNF625Q96I27 306 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-221ENST00000520339 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
CTNNA1-221ENST00000520339 C22orf24Q9Y442 160 aa5.54□□□□□ -1.52
CTNNA1-221ENST00000520339 A0A0U1RRA0 63 aa5.53□□□□□ -1.52
CTNNA1-221ENST00000520339 K7ERJ3 54 aa5.53□□□□□ -1.52
CTNNA1-221ENST00000520339 ZNF861PO60384 105 aa5.53□□□□□ -1.52
CTNNA1-221ENST00000520339 XAGE1AQ9HD64 81 aa5.53□□□□□ -1.52
CTNNA1-221ENST00000520339 SLC25A20O43772 301 aa5.52□□□□□ -1.53
CTNNA1-221ENST00000520339 HRCT1Q6UXD1 115 aa5.52□□□□□ -1.53
CTNNA1-221ENST00000520339 LITAFQ99732 161 aa5.52□□□□□ -1.53
CTNNA1-221ENST00000520339 H3BT86 120 aa5.51□□□□□ -1.53
CTNNA1-221ENST00000520339 PSMB2P49721 201 aa5.51□□□□□ -1.53
CTNNA1-221ENST00000520339 C4orf26Q17RF5 130 aa5.51□□□□□ -1.53
CTNNA1-221ENST00000520339 LINC00643Q86TS7 51 aa5.51□□□□□ -1.53
CTNNA1-221ENST00000520339 PFN2P35080 140 aa5.5□□□□□ -1.53
CTNNA1-221ENST00000520339 HIST1H4AP62805 103 aaKnown RBP5.5□□□□□ -1.53
CTNNA1-221ENST00000520339 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
CTNNA1-221ENST00000520339 FAM236AA0A1B0GUQ0 79 aa5.49□□□□□ -1.53
CTNNA1-221ENST00000520339 FAM236BA0A1B0GV22 79 aa5.49□□□□□ -1.53
CTNNA1-221ENST00000520339 CD164Q04900 197 aa5.49□□□□□ -1.53
CTNNA1-221ENST00000520339 MRPL55Q7Z7F7 128 aaKnown RBP5.49□□□□□ -1.53
CTNNA1-221ENST00000520339 TRBV10-2A0A0K0K1G8 114 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 BCE1O60756 84 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 ADAMTSL4-AS1Q5T5F5 129 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 LINC00167Q96N53 147 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
CTNNA1-221ENST00000520339 TCL1BO95988 128 aa5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 LINC00158P58513 81 aa5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 ATXN8Q156A1 80 aa5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 PRR4Q16378 134 aa5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 DAND5Q8N907 189 aa5.47□□□□□ -1.53
CTNNA1-221ENST00000520339 A0A087X002 238 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 SMIM26A0A096LP01 95 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 A0A0B4J2C4 111 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 LOC107984156A0A0G2JMH3 177 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 RPL37AP8A6NKH3 93 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 LINC01547P58512 204 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 NPC2P61916 151 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 COX17Q14061 63 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 ARL17AQ8IVW1 177 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 MIR7-3HGQ8N6C7 128 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 LINC00308Q8TCZ7 52 aa5.46□□□□□ -1.54
CTNNA1-221ENST00000520339 FAM19A1Q7Z5A9 133 aa5.45□□□□□ -1.54
CTNNA1-221ENST00000520339 KRTAP13-1Q8IUC0 172 aa5.45□□□□□ -1.54
CTNNA1-221ENST00000520339 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
CTNNA1-221ENST00000520339 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
CTNNA1-221ENST00000520339 CFC1P0CG37 223 aa5.44□□□□□ -1.54
CTNNA1-221ENST00000520339 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
CTNNA1-221ENST00000520339 MUC2Q02817 5179 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 FAM236DA0A1B0GTK5 79 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 FAM236CP0DP71 79 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 PRO1854Q9UHT4 67 aa5.43□□□□□ -1.54
CTNNA1-221ENST00000520339 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
CTNNA1-221ENST00000520339 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
CTNNA1-221ENST00000520339 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
CTNNA1-221ENST00000520339 UBE2AP49459 152 aa5.41□□□□□ -1.54
CTNNA1-221ENST00000520339 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
CTNNA1-221ENST00000520339 Q1RN00 199 aa5.41□□□□□ -1.54
CTNNA1-221ENST00000520339 hADV29S1A0JD25 119 aa5.4□□□□□ -1.54
CTNNA1-221ENST00000520339 H7C2G1 150 aa5.4□□□□□ -1.54
CTNNA1-221ENST00000520339 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.54
CTNNA1-221ENST00000520339 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
CTNNA1-221ENST00000520339 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
CTNNA1-221ENST00000520339 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
CTNNA1-221ENST00000520339 Q8NDZ9 215 aa5.39□□□□□ -1.55
CTNNA1-221ENST00000520339 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
CTNNA1-221ENST00000520339 A0A0U1RQV1 116 aa5.38□□□□□ -1.55
CTNNA1-221ENST00000520339 PRR15Q8IV56 129 aa5.38□□□□□ -1.55
CTNNA1-221ENST00000520339 TRBV7-6A0A0J9YX20 115 aa5.37□□□□□ -1.55
CTNNA1-221ENST00000520339 M0R378 163 aa5.37□□□□□ -1.55
CTNNA1-221ENST00000520339 COX6CP09669 75 aa5.37□□□□□ -1.55
CTNNA1-221ENST00000520339 PRLHP81277 87 aa5.37□□□□□ -1.55
CTNNA1-221ENST00000520339 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
CTNNA1-221ENST00000520339 TEX49A0A1B0GTD5 131 aa5.36□□□□□ -1.55
CTNNA1-221ENST00000520339 LINC00337Q8N6G1 96 aa5.36□□□□□ -1.55
CTNNA1-221ENST00000520339 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
CTNNA1-221ENST00000520339 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms