RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 SPRR1BP22528 89 aa4.18□□□□□ -1.74
CDH12-203ENST00000517378 MDFIQ99750 246 aa4.18□□□□□ -1.74
CDH12-203ENST00000517378 PSCAO43653 123 aa4.17□□□□□ -1.74
CDH12-203ENST00000517378 PRLHP81277 87 aa4.17□□□□□ -1.74
CDH12-203ENST00000517378 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
CDH12-203ENST00000517378 LINC00474Q9P2X8 69 aa4.17□□□□□ -1.74
CDH12-203ENST00000517378 C14orf177Q52M58 125 aa4.16□□□□□ -1.74
CDH12-203ENST00000517378 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
CDH12-203ENST00000517378 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
CDH12-203ENST00000517378 LINC00336Q6ZUF6 198 aa4.16□□□□□ -1.74
CDH12-203ENST00000517378 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.15□□□□□ -1.74
CDH12-203ENST00000517378 PRO0628Q9UI54 55 aa4.15□□□□□ -1.74
CDH12-203ENST00000517378 HUWE1Q7Z6Z7 4374 aaKnown RBP4.15□□□□□ -1.75
CDH12-203ENST00000517378 hDV103S1A0JD37 113 aa4.15□□□□□ -1.75
CDH12-203ENST00000517378 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
CDH12-203ENST00000517378 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
CDH12-203ENST00000517378 A0A087WSZ3 146 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 IGKV2-24A0A0C4DH68 120 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 CYP4F30PQ9H0H9 118 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 UBE2AP49459 152 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 APLNQ9ULZ1 77 aa4.14□□□□□ -1.75
CDH12-203ENST00000517378 NDUFB1O75438 58 aa4.13□□□□□ -1.75
CDH12-203ENST00000517378 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
CDH12-203ENST00000517378 C9orf163Q8N9P6 203 aa4.13□□□□□ -1.75
CDH12-203ENST00000517378 LRCOL1A6NCL2 159 aa4.12□□□□□ -1.75
CDH12-203ENST00000517378 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
CDH12-203ENST00000517378 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
CDH12-203ENST00000517378 H3BPC8 53 aa4.12□□□□□ -1.75
CDH12-203ENST00000517378 PRR15Q8IV56 129 aa4.12□□□□□ -1.75
CDH12-203ENST00000517378 A8MWP4 228 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 C1orf64Q8NEQ6 169 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 UBE2DNLQ8IWF7 75 aa4.11□□□□□ -1.75
CDH12-203ENST00000517378 Q1T7F1 81 aa4.1□□□□□ -1.75
CDH12-203ENST00000517378 MP68P56378 58 aa4.1□□□□□ -1.75
CDH12-203ENST00000517378 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
CDH12-203ENST00000517378 B9D2Q9BPU9 175 aa4.1□□□□□ -1.75
CDH12-203ENST00000517378 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
CDH12-203ENST00000517378 CASC2Q6XLA1 102 aa4.09□□□□□ -1.75
CDH12-203ENST00000517378 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.75
CDH12-203ENST00000517378 SPANXA2-OT1Q8N9U9 137 aa4.09□□□□□ -1.75
CDH12-203ENST00000517378 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
CDH12-203ENST00000517378 COL7A1Q02388 2944 aa4.09□□□□□ -1.76
CDH12-203ENST00000517378 MEGF8Q7Z7M0 2845 aa4.08□□□□□ -1.76
CDH12-203ENST00000517378 TENM2Q9NT68 2774 aa4.08□□□□□ -1.76
CDH12-203ENST00000517378 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
CDH12-203ENST00000517378 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
CDH12-203ENST00000517378 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 SPACA4Q8TDM5 124 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 LYSTQ99698 3801 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 H0Y9P7 68 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 PANO1I0J062 215 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 PRKDCP78527 4128 aaKnown RBP4.07□□□□□ -1.76
CDH12-203ENST00000517378 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
CDH12-203ENST00000517378 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
CDH12-203ENST00000517378 Q96NJ1 140 aa4.06□□□□□ -1.76
CDH12-203ENST00000517378 NUPR2A6NF83 97 aa4.05□□□□□ -1.76
CDH12-203ENST00000517378 MOBPQ13875 183 aa4.04□□□□□ -1.76
CDH12-203ENST00000517378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.03□□□□□ -1.76
CDH12-203ENST00000517378 V9GYY9 64 aa4.03□□□□□ -1.76
CDH12-203ENST00000517378 PRR4Q16378 134 aa4.03□□□□□ -1.76
CDH12-203ENST00000517378 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
CDH12-203ENST00000517378 ZNF706Q9Y5V0 76 aaPredicted RBP4.03□□□□□ -1.76
CDH12-203ENST00000517378 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
CDH12-203ENST00000517378 Q6ZR54 194 aa4.02□□□□□ -1.77
CDH12-203ENST00000517378 WWC2-AS2Q96NR7 200 aa4.02□□□□□ -1.77
CDH12-203ENST00000517378 IGLV7-46A0A075B6I9 117 aa4.01□□□□□ -1.77
CDH12-203ENST00000517378 A0A087WTM6 91 aa4.01□□□□□ -1.77
CDH12-203ENST00000517378 STAB2Q8WWQ8 2551 aa4□□□□□ -1.77
CDH12-203ENST00000517378 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
CDH12-203ENST00000517378 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
CDH12-203ENST00000517378 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
CDH12-203ENST00000517378 C8orf17Q9NRJ1 99 aa4□□□□□ -1.77
CDH12-203ENST00000517378 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
CDH12-203ENST00000517378 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
CDH12-203ENST00000517378 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
CDH12-203ENST00000517378 RTL8CO15255 209 aa3.98□□□□□ -1.77
CDH12-203ENST00000517378 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
CDH12-203ENST00000517378 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
CDH12-203ENST00000517378 PSPHP1O15172 72 aa3.98□□□□□ -1.77
CDH12-203ENST00000517378 ZNF861PO60384 105 aa3.98□□□□□ -1.77
CDH12-203ENST00000517378 Q5VV11 94 aa3.98□□□□□ -1.77
CDH12-203ENST00000517378 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
CDH12-203ENST00000517378 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
CDH12-203ENST00000517378 CD164Q04900 197 aa3.97□□□□□ -1.77
CDH12-203ENST00000517378 COA5Q86WW8 74 aa3.97□□□□□ -1.77
CDH12-203ENST00000517378 A8MUN3 132 aa3.96□□□□□ -1.78
CDH12-203ENST00000517378 MRPL34Q9BQ48 92 aaKnown RBP3.96□□□□□ -1.78
CDH12-203ENST00000517378 PLECQ15149 4684 aaKnown RBP3.95□□□□□ -1.78
CDH12-203ENST00000517378 IGHV6-1A0A0B4J1U7 121 aa3.95□□□□□ -1.78
CDH12-203ENST00000517378 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
CDH12-203ENST00000517378 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms