RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	PLN	P26678	52 aa		5.17	□□□□□ -1.58
CLDND1-231	ENST00000515620	LINC00308	Q8TCZ7	52 aa		5.17	□□□□□ -1.58
CLDND1-231	ENST00000515620	CHCHD1	Q96BP2	118 aa	Known RBP	5.17	□□□□□ -1.58
CLDND1-231	ENST00000515620		F8WEM9	126 aa		5.16	□□□□□ -1.58
CLDND1-231	ENST00000515620	KRTAP3-1	Q9BYR8	98 aa		5.16	□□□□□ -1.58
CLDND1-231	ENST00000515620	TRBV7-7	A0A0K0K1E9	115 aa		5.15	□□□□□ -1.59
CLDND1-231	ENST00000515620	TMEM218	A2RU14	115 aa		5.15	□□□□□ -1.59
CLDND1-231	ENST00000515620		A8MUU9	505 aa		5.15	□□□□□ -1.59
CLDND1-231	ENST00000515620	PCP4	P48539	62 aa		5.15	□□□□□ -1.59
CLDND1-231	ENST00000515620	TRBV7-6	A0A0J9YX20	115 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620		A0A1B0GWB2	263 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620	DPM2	O94777	84 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620	LITAF	Q99732	161 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620	PMCHL2	Q9BQD1	86 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620	RBM12B-AS1	Q9P1G2	102 aa		5.14	□□□□□ -1.59
CLDND1-231	ENST00000515620	HSBP1	O75506	76 aa		5.13	□□□□□ -1.59
CLDND1-231	ENST00000515620	LINC00518	Q8N0U6	118 aa		5.12	□□□□□ -1.59
CLDND1-231	ENST00000515620	CLEC2B	Q92478	149 aa		5.12	□□□□□ -1.59
CLDND1-231	ENST00000515620	IGKC	P01834	107 aa		5.11	□□□□□ -1.59
CLDND1-231	ENST00000515620	HRES1	P13985	223 aa		5.11	□□□□□ -1.59
CLDND1-231	ENST00000515620	UQCC3	Q6UW78	93 aa		5.11	□□□□□ -1.59
CLDND1-231	ENST00000515620	MPLKIP	Q8TAP9	179 aa		5.11	□□□□□ -1.59
CLDND1-231	ENST00000515620	KRTAP4-11	Q9BYQ6	195 aa		5.11	□□□□□ -1.59
CLDND1-231	ENST00000515620	LST1	O00453	97 aa		5.1	□□□□□ -1.59
CLDND1-231	ENST00000515620		Q6JHZ5	121 aa		5.1	□□□□□ -1.59
CLDND1-231	ENST00000515620	KRTAP16-1	A8MUX0	517 aa		5.09	□□□□□ -1.59
CLDND1-231	ENST00000515620	LEPROTL1	O95214	131 aa		5.09	□□□□□ -1.59
CLDND1-231	ENST00000515620	NHP2	Q9NX24	153 aa	Known RBP	5.09	□□□□□ -1.59
CLDND1-231	ENST00000515620		E9PLD3	99 aa		5.08	□□□□□ -1.6
CLDND1-231	ENST00000515620	TIMM17B	O60830	172 aa		5.08	□□□□□ -1.6
CLDND1-231	ENST00000515620	CLLU1	Q5K131	121 aa		5.08	□□□□□ -1.6
CLDND1-231	ENST00000515620		Q8N9P0	234 aa	Predicted RBP	5.08	□□□□□ -1.6
CLDND1-231	ENST00000515620	KRTAP4-2	Q9BYR5	136 aa		5.08	□□□□□ -1.6
CLDND1-231	ENST00000515620	SERF1A	O75920	110 aa		5.07	□□□□□ -1.6
CLDND1-231	ENST00000515620	SLC7A5P1	Q8MH63	180 aa		5.07	□□□□□ -1.6
CLDND1-231	ENST00000515620		A6NDN8	102 aa		5.06	□□□□□ -1.6
CLDND1-231	ENST00000515620	DSCR10	P59022	87 aa		5.06	□□□□□ -1.6
CLDND1-231	ENST00000515620		Q6ZVH6	145 aa		5.06	□□□□□ -1.6
CLDND1-231	ENST00000515620	TRAV13-2	A0A0B4J235	113 aa		5.05	□□□□□ -1.6
CLDND1-231	ENST00000515620	FABP4	P15090	132 aa		5.04	□□□□□ -1.6
CLDND1-231	ENST00000515620	OCIAD2	Q56VL3	154 aa		5.04	□□□□□ -1.6
CLDND1-231	ENST00000515620	HSPB8	Q9UJY1	196 aa		5.04	□□□□□ -1.6
CLDND1-231	ENST00000515620	KRTAP23-1	A1A580	65 aa		5.03	□□□□□ -1.6
CLDND1-231	ENST00000515620	ZNF815P	A8K554	130 aa		5.03	□□□□□ -1.6
CLDND1-231	ENST00000515620	NOTCH2NL	Q7Z3S9	236 aa		5.03	□□□□□ -1.6
CLDND1-231	ENST00000515620	MUC12	Q9UKN1	5478 aa		5.03	□□□□□ -1.6
CLDND1-231	ENST00000515620		A8MWP4	228 aa		5.02	□□□□□ -1.61
CLDND1-231	ENST00000515620		Q6ZQY7	126 aa		5.02	□□□□□ -1.61
CLDND1-231	ENST00000515620	TTTY13	Q9BZ97	58 aa		5.02	□□□□□ -1.61
CLDND1-231	ENST00000515620	MTURN	Q8N3F0	131 aa		5.01	□□□□□ -1.61
CLDND1-231	ENST00000515620	SMIM11B	Q8TCY0	68 aa		5.01	□□□□□ -1.61
CLDND1-231	ENST00000515620	SS18L2	Q9UHA2	77 aa		5.01	□□□□□ -1.61
CLDND1-231	ENST00000515620		H3BUT2	72 aa		5	□□□□□ -1.61
CLDND1-231	ENST00000515620	LINC00575	Q6W349	94 aa		4.99	□□□□□ -1.61
CLDND1-231	ENST00000515620	SIGMAR1	Q99720	223 aa		4.98	□□□□□ -1.61
CLDND1-231	ENST00000515620	hADV29S1	A0JD25	119 aa		4.97	□□□□□ -1.61
CLDND1-231	ENST00000515620	COPS9	Q8WXC6	57 aa		4.97	□□□□□ -1.61
CLDND1-231	ENST00000515620	YPEL4	Q96NS1	127 aa		4.97	□□□□□ -1.61
CLDND1-231	ENST00000515620	TRIAP1	O43715	76 aa		4.96	□□□□□ -1.62
CLDND1-231	ENST00000515620	VAMP3	Q15836	100 aa		4.96	□□□□□ -1.62
CLDND1-231	ENST00000515620	SCGB1D4	Q6XE38	83 aa		4.96	□□□□□ -1.62
CLDND1-231	ENST00000515620		A0A087WSZ3	146 aa		4.95	□□□□□ -1.62
CLDND1-231	ENST00000515620	COLCA2	A8K830	154 aa		4.95	□□□□□ -1.62
CLDND1-231	ENST00000515620	IFITM1	P13164	125 aa		4.95	□□□□□ -1.62
CLDND1-231	ENST00000515620	LINC00313	P59037	77 aa		4.95	□□□□□ -1.62
CLDND1-231	ENST00000515620	SNHG12	Q9BXW3	62 aa		4.95	□□□□□ -1.62
CLDND1-231	ENST00000515620		A6NN06	94 aa		4.94	□□□□□ -1.62
CLDND1-231	ENST00000515620	APOC3	P02656	99 aa		4.94	□□□□□ -1.62
CLDND1-231	ENST00000515620	MUSTN1	Q8IVN3	82 aa		4.94	□□□□□ -1.62
CLDND1-231	ENST00000515620	SNAPIN	O95295	136 aa		4.93	□□□□□ -1.62
CLDND1-231	ENST00000515620	TRGC2	P03986	189 aa		4.93	□□□□□ -1.62
CLDND1-231	ENST00000515620	SYS1-DBNDD2	H3BUS1	97 aa		4.92	□□□□□ -1.62
CLDND1-231	ENST00000515620	KRTAP5-9	P26371	169 aa		4.92	□□□□□ -1.62
CLDND1-231	ENST00000515620	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.92	□□□□□ -1.62
CLDND1-231	ENST00000515620	TEN1	Q86WV5	123 aa		4.92	□□□□□ -1.62
CLDND1-231	ENST00000515620	KRTAP2-3	P0C7H8	128 aa		4.91	□□□□□ -1.62
CLDND1-231	ENST00000515620	PPDPFL	Q8WWR9	84 aa		4.91	□□□□□ -1.62
CLDND1-231	ENST00000515620	KRTAP2-4	Q9BYR9	128 aa		4.91	□□□□□ -1.62
CLDND1-231	ENST00000515620	LINC01545	Q5VT33	79 aa		4.9	□□□□□ -1.63
CLDND1-231	ENST00000515620	SVBP	Q8N300	66 aa		4.9	□□□□□ -1.63
CLDND1-231	ENST00000515620	IGKV4-1	P06312	121 aa		4.88	□□□□□ -1.63
CLDND1-231	ENST00000515620	SPINK7	P58062	85 aa		4.88	□□□□□ -1.63
CLDND1-231	ENST00000515620	NDUFA5	Q16718	116 aa		4.88	□□□□□ -1.63
CLDND1-231	ENST00000515620	WFDC13	Q8IUB5	93 aa		4.87	□□□□□ -1.63
CLDND1-231	ENST00000515620	KMT2D	O14686	5537 aa		4.86	□□□□□ -1.63
CLDND1-231	ENST00000515620	IGHV6-1	A0A0B4J1U7	121 aa		4.85	□□□□□ -1.63
CLDND1-231	ENST00000515620		A0A1W2PNM2	257 aa		4.85	□□□□□ -1.63
CLDND1-231	ENST00000515620	ZCCHC13	Q8WW36	166 aa	Known RBP	4.84	□□□□□ -1.63
CLDND1-231	ENST00000515620	MDN1	Q9NU22	5596 aa		4.83	□□□□□ -1.64
CLDND1-231	ENST00000515620		A0A0A0MQY5	61 aa		4.83	□□□□□ -1.64
CLDND1-231	ENST00000515620	NDUFV3	P56181	108 aa	Known RBP	4.83	□□□□□ -1.64
CLDND1-231	ENST00000515620	DEFB116	Q30KQ4	102 aa		4.83	□□□□□ -1.64
CLDND1-231	ENST00000515620	C12orf57	Q99622	126 aa		4.83	□□□□□ -1.64
CLDND1-231	ENST00000515620	MT1B	P07438	61 aa		4.81	□□□□□ -1.64
CLDND1-231	ENST00000515620	BVES-AS1	Q5T3Y7	98 aa		4.81	□□□□□ -1.64
CLDND1-231	ENST00000515620	FAM218A	Q96MZ4	157 aa		4.81	□□□□□ -1.64
CLDND1-231	ENST00000515620		H3BMG7	143 aa		4.8	□□□□□ -1.64
CLDND1-231	ENST00000515620	C3orf79	P0CE67	100 aa		4.79	□□□□□ -1.64
CLDND1-231	ENST00000515620	KRTAP10-5	P60370	271 aa		4.79	□□□□□ -1.64
CLDND1-231	ENST00000515620		Q5VV11	94 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms