RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SPATA45Q537H7 98 aa13.44□□□□□ -0.26
SNF8-213ENST00000514929 VAMP8Q9BV40 100 aa13.42□□□□□ -0.26
SNF8-213ENST00000514929 KRTAP4-1Q9BYQ7 146 aa13.42□□□□□ -0.26
SNF8-213ENST00000514929 C1orf195Q5TG92 126 aa13.4□□□□□ -0.26
SNF8-213ENST00000514929 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.4□□□□□ -0.26
SNF8-213ENST00000514929 HIGD1BQ9P298 99 aa13.4□□□□□ -0.26
SNF8-213ENST00000514929 RAB37Q96AX2 223 aa13.39□□□□□ -0.27
SNF8-213ENST00000514929 TCL1BO95988 128 aa13.38□□□□□ -0.27
SNF8-213ENST00000514929 CFC1BP0CG36 223 aa13.38□□□□□ -0.27
SNF8-213ENST00000514929 CFC1P0CG37 223 aa13.38□□□□□ -0.27
SNF8-213ENST00000514929 Q6JHZ5 121 aa13.36□□□□□ -0.27
SNF8-213ENST00000514929 OCIAD2Q56VL3 154 aa13.34□□□□□ -0.27
SNF8-213ENST00000514929 C2orf91Q6ZV80 131 aa13.34□□□□□ -0.27
SNF8-213ENST00000514929 PPDPFLQ8WWR9 84 aa13.34□□□□□ -0.27
SNF8-213ENST00000514929 IGLV8-61A0A075B6I0 122 aa13.33□□□□□ -0.28
SNF8-213ENST00000514929 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
SNF8-213ENST00000514929 CLEC2BQ92478 149 aa13.33□□□□□ -0.28
SNF8-213ENST00000514929 IGFL1Q6UW32 110 aa13.32□□□□□ -0.28
SNF8-213ENST00000514929 SNHG12Q9BXW3 62 aa13.32□□□□□ -0.28
SNF8-213ENST00000514929 SNCGO76070 127 aa13.3□□□□□ -0.28
SNF8-213ENST00000514929 PCOTHQ58A44 107 aa13.3□□□□□ -0.28
SNF8-213ENST00000514929 H0YGX0 51 aa13.28□□□□□ -0.28
SNF8-213ENST00000514929 CEND1Q8N111 149 aa13.28□□□□□ -0.28
SNF8-213ENST00000514929 TRBV7-7A0A0K0K1E9 115 aa13.27□□□□□ -0.29
SNF8-213ENST00000514929 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
SNF8-213ENST00000514929 A6NJY4 79 aa13.26□□□□□ -0.29
SNF8-213ENST00000514929 H3BUT2 72 aa13.23□□□□□ -0.29
SNF8-213ENST00000514929 PRO1854Q9UHT4 67 aa13.23□□□□□ -0.29
SNF8-213ENST00000514929 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
SNF8-213ENST00000514929 FXYD2P54710 66 aa13.19□□□□□ -0.3
SNF8-213ENST00000514929 PYY3Q5JQD4 70 aa13.17□□□□□ -0.3
SNF8-213ENST00000514929 RPL37P61927 97 aaKnown RBP13.16□□□□□ -0.3
SNF8-213ENST00000514929 NDUFV3P56181 108 aaKnown RBP13.15□□□□□ -0.3
SNF8-213ENST00000514929 KRTAP9-2Q9BYQ4 174 aa13.15□□□□□ -0.3
SNF8-213ENST00000514929 A0A1B0GX51 115 aa13.14□□□□□ -0.31
SNF8-213ENST00000514929 GHRHP01286 108 aa13.13□□□□□ -0.31
SNF8-213ENST00000514929 LST1O00453 97 aa13.11□□□□□ -0.31
SNF8-213ENST00000514929 TRIAP1O43715 76 aa13.11□□□□□ -0.31
SNF8-213ENST00000514929 HSD52Q0P140 79 aa13.11□□□□□ -0.31
SNF8-213ENST00000514929 FABP2P12104 132 aa13.1□□□□□ -0.31
SNF8-213ENST00000514929 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
SNF8-213ENST00000514929 SS18L2Q9UHA2 77 aa13.09□□□□□ -0.31
SNF8-213ENST00000514929 H3BMG7 143 aa13.08□□□□□ -0.32
SNF8-213ENST00000514929 Q6Q795 121 aa13.08□□□□□ -0.32
SNF8-213ENST00000514929 TEN1Q86WV5 123 aa13.08□□□□□ -0.32
SNF8-213ENST00000514929 LCE2CQ5TA81 110 aa13.06□□□□□ -0.32
SNF8-213ENST00000514929 PSMB2P49721 201 aa13.05□□□□□ -0.32
SNF8-213ENST00000514929 K7ERJ3 54 aa13.04□□□□□ -0.32
SNF8-213ENST00000514929 OBSCN-AS1Q96MR7 158 aa13.04□□□□□ -0.32
SNF8-213ENST00000514929 DNAL4O96015 105 aa13.03□□□□□ -0.32
SNF8-213ENST00000514929 KRTAP19-2Q3LHN2 52 aa13.03□□□□□ -0.32
SNF8-213ENST00000514929 UQCR10Q9UDW1 63 aa13.02□□□□□ -0.33
SNF8-213ENST00000514929 A0A087WSZ3 146 aa13.01□□□□□ -0.33
SNF8-213ENST00000514929 COX6CP09669 75 aa12.99□□□□□ -0.33
SNF8-213ENST00000514929 ORMDL1Q9P0S3 153 aa12.98□□□□□ -0.33
SNF8-213ENST00000514929 H3BQ85 93 aa12.95□□□□□ -0.34
SNF8-213ENST00000514929 Q75L30 129 aa12.94□□□□□ -0.34
SNF8-213ENST00000514929 A0A1W2PNM2 257 aa12.93□□□□□ -0.34
SNF8-213ENST00000514929 ATP11AUNQ6ZP68 121 aa12.93□□□□□ -0.34
SNF8-213ENST00000514929 Q96NJ1 140 aa12.93□□□□□ -0.34
SNF8-213ENST00000514929 A0A1B0GV72 72 aa12.92□□□□□ -0.34
SNF8-213ENST00000514929 MT1HP80294 61 aa12.92□□□□□ -0.34
SNF8-213ENST00000514929 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
SNF8-213ENST00000514929 TMEM256-PLSCR3K7ERE1 68 aa12.91□□□□□ -0.34
SNF8-213ENST00000514929 COX6B2Q6YFQ2 88 aa12.87□□□□□ -0.35
SNF8-213ENST00000514929 TRBV7-4A0A0J9YYF1 115 aa12.85□□□□□ -0.35
SNF8-213ENST00000514929 SCGB1C2P0DMR2 95 aa12.85□□□□□ -0.35
SNF8-213ENST00000514929 SIGMAR1Q99720 223 aa12.84□□□□□ -0.35
SNF8-213ENST00000514929 TRACP01848 142 aa12.82□□□□□ -0.36
SNF8-213ENST00000514929 UBE2V1Q13404 147 aa12.81□□□□□ -0.36
SNF8-213ENST00000514929 C20orf166-AS1Q96NR2 134 aa12.81□□□□□ -0.36
SNF8-213ENST00000514929 CCKP06307 115 aa12.8□□□□□ -0.36
SNF8-213ENST00000514929 DSCR10P59022 87 aa12.79□□□□□ -0.36
SNF8-213ENST00000514929 A8MUU9 505 aa12.78□□□□□ -0.36
SNF8-213ENST00000514929 IGKV4-1P06312 121 aa12.78□□□□□ -0.36
SNF8-213ENST00000514929 M0R2T5 61 aa12.76□□□□□ -0.37
SNF8-213ENST00000514929 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
SNF8-213ENST00000514929 LINC00313P59037 77 aa12.72□□□□□ -0.37
SNF8-213ENST00000514929 VPS25Q9BRG1 176 aa12.72□□□□□ -0.37
SNF8-213ENST00000514929 RBM3P98179 157 aaKnown RBP12.71□□□□□ -0.37
SNF8-213ENST00000514929 DEFB116Q30KQ4 102 aa12.71□□□□□ -0.37
SNF8-213ENST00000514929 KRTAP9-6A0A140TA67 174 aa12.7□□□□□ -0.38
SNF8-213ENST00000514929 M0R143 59 aa12.69□□□□□ -0.38
SNF8-213ENST00000514929 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
SNF8-213ENST00000514929 LINC00472Q9H8W2 130 aa12.69□□□□□ -0.38
SNF8-213ENST00000514929 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
SNF8-213ENST00000514929 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
SNF8-213ENST00000514929 LORP23490 312 aaPredicted RBP12.65□□□□□ -0.38
SNF8-213ENST00000514929 IGHV6-1A0A0B4J1U7 121 aa12.62□□□□□ -0.39
SNF8-213ENST00000514929 KRTAP16-1A8MUX0 517 aa12.62□□□□□ -0.39
SNF8-213ENST00000514929 NAA38Q9BRA0 125 aaKnown RBP12.62□□□□□ -0.39
SNF8-213ENST00000514929 FLGP20930 4061 aaPredicted RBP12.62□□□□□ -0.39
SNF8-213ENST00000514929 C9JAW5 83 aa12.61□□□□□ -0.39
SNF8-213ENST00000514929 SMIM6P0DI80 62 aa12.61□□□□□ -0.39
SNF8-213ENST00000514929 ATXN8Q156A1 80 aa12.61□□□□□ -0.39
SNF8-213ENST00000514929 NOTCH2NLQ7Z3S9 236 aa12.61□□□□□ -0.39
SNF8-213ENST00000514929 TRBV20-1A0A075B6N2 111 aa12.59□□□□□ -0.39
SNF8-213ENST00000514929 C21orf62-AS1Q17RA5 79 aa12.57□□□□□ -0.4
SNF8-213ENST00000514929 A0A1B0GVX0 72 aa12.53□□□□□ -0.4
SNF8-213ENST00000514929 C8orf87E5RJ46 101 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms