RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-209ENST00000512055 UTP20O75691 2785 aaKnown RBP7.23□□□□□ -1.25
CPNE4-209ENST00000512055 ZFHX4Q86UP3 3567 aa7.22□□□□□ -1.25
CPNE4-209ENST00000512055 RELNP78509 3460 aa7.22□□□□□ -1.25
CPNE4-209ENST00000512055 ZANQ9Y493 2812 aa7.22□□□□□ -1.25
CPNE4-209ENST00000512055 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
CPNE4-209ENST00000512055 KRTAP10-11P60412 298 aa7.2□□□□□ -1.26
CPNE4-209ENST00000512055 FAM104AQ969W3 186 aa7.19□□□□□ -1.26
CPNE4-209ENST00000512055 HRNRQ86YZ3 2850 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-209ENST00000512055 H3BNG1 76 aa7.18□□□□□ -1.26
CPNE4-209ENST00000512055 NOTCH1P46531 2555 aa7.18□□□□□ -1.26
CPNE4-209ENST00000512055 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
CPNE4-209ENST00000512055 C9orf163Q8N9P6 203 aa7.17□□□□□ -1.26
CPNE4-209ENST00000512055 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
CPNE4-209ENST00000512055 COL6A5A8TX70 2615 aa7.17□□□□□ -1.26
CPNE4-209ENST00000512055 ITPR2Q14571 2701 aa7.17□□□□□ -1.26
CPNE4-209ENST00000512055 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
CPNE4-209ENST00000512055 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
CPNE4-209ENST00000512055 LINC00588Q9Y4M8 146 aa7.16□□□□□ -1.26
CPNE4-209ENST00000512055 CRYBG3Q68DQ2 2970 aa7.15□□□□□ -1.26
CPNE4-209ENST00000512055 DSCR10P59022 87 aa7.15□□□□□ -1.27
CPNE4-209ENST00000512055 LINC00483Q53H64 154 aa7.14□□□□□ -1.27
CPNE4-209ENST00000512055 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
CPNE4-209ENST00000512055 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
CPNE4-209ENST00000512055 CHTF8P0CG12 524 aa7.14□□□□□ -1.27
CPNE4-209ENST00000512055 KRTAP16-1A8MUX0 517 aa7.14□□□□□ -1.27
CPNE4-209ENST00000512055 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
CPNE4-209ENST00000512055 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
CPNE4-209ENST00000512055 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
CPNE4-209ENST00000512055 Q6ZRP5 223 aa7.12□□□□□ -1.27
CPNE4-209ENST00000512055 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
CPNE4-209ENST00000512055 PRR34Q9NV39 138 aa7.11□□□□□ -1.27
CPNE4-209ENST00000512055 Q5XG85 94 aa7.1□□□□□ -1.27
CPNE4-209ENST00000512055 DCHS2Q6V1P9 2916 aa7.1□□□□□ -1.27
CPNE4-209ENST00000512055 Q8N1X5 172 aa7.1□□□□□ -1.27
CPNE4-209ENST00000512055 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
CPNE4-209ENST00000512055 RTL8CO15255 209 aa7.09□□□□□ -1.27
CPNE4-209ENST00000512055 SPINK7P58062 85 aa7.09□□□□□ -1.27
CPNE4-209ENST00000512055 Q75L30 129 aa7.09□□□□□ -1.27
CPNE4-209ENST00000512055 APCP25054 2843 aa7.09□□□□□ -1.27
CPNE4-209ENST00000512055 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.28
CPNE4-209ENST00000512055 K7EIL1 84 aa7.09□□□□□ -1.28
CPNE4-209ENST00000512055 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
CPNE4-209ENST00000512055 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
CPNE4-209ENST00000512055 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
CPNE4-209ENST00000512055 A0A1B0GVX0 72 aa7.07□□□□□ -1.28
CPNE4-209ENST00000512055 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
CPNE4-209ENST00000512055 A0A1W2PNN7 141 aa7.07□□□□□ -1.28
CPNE4-209ENST00000512055 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
CPNE4-209ENST00000512055 OBSCN-AS1Q96MR7 158 aa7.06□□□□□ -1.28
CPNE4-209ENST00000512055 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
CPNE4-209ENST00000512055 A0A1B0GU33 70 aa7.04□□□□□ -1.28
CPNE4-209ENST00000512055 NF1P21359 2839 aa7.04□□□□□ -1.28
CPNE4-209ENST00000512055 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
CPNE4-209ENST00000512055 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
CPNE4-209ENST00000512055 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.28
CPNE4-209ENST00000512055 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-209ENST00000512055 FBN2P35556 2912 aa7.02□□□□□ -1.29
CPNE4-209ENST00000512055 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
CPNE4-209ENST00000512055 SMG1Q96Q15 3661 aaKnown RBP7.01□□□□□ -1.29
CPNE4-209ENST00000512055 C9orf92A6NGG3 77 aa7.01□□□□□ -1.29
CPNE4-209ENST00000512055 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
CPNE4-209ENST00000512055 NBEAL1Q6ZS30 2694 aa7□□□□□ -1.29
CPNE4-209ENST00000512055 NBDYA0A0U1RRE5 68 aa7□□□□□ -1.29
CPNE4-209ENST00000512055 CASC10Q5T4H9 136 aa7□□□□□ -1.29
CPNE4-209ENST00000512055 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-209ENST00000512055 Q8N377 158 aa6.98□□□□□ -1.29
CPNE4-209ENST00000512055 HIVEP1P15822 2718 aa6.96□□□□□ -1.29
CPNE4-209ENST00000512055 Q5VV11 94 aa6.96□□□□□ -1.3
CPNE4-209ENST00000512055 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.3
CPNE4-209ENST00000512055 LINC01558Q9Y6Z2 57 aa6.96□□□□□ -1.3
CPNE4-209ENST00000512055 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
CPNE4-209ENST00000512055 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
CPNE4-209ENST00000512055 BAHCC1Q9P281 2608 aa6.95□□□□□ -1.3
CPNE4-209ENST00000512055 NSD1Q96L73 2696 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-209ENST00000512055 M0R2T5 61 aa6.94□□□□□ -1.3
CPNE4-209ENST00000512055 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
CPNE4-209ENST00000512055 IGLV7-46A0A075B6I9 117 aa6.92□□□□□ -1.3
CPNE4-209ENST00000512055 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
CPNE4-209ENST00000512055 Q8NDZ9 215 aa6.9□□□□□ -1.31
CPNE4-209ENST00000512055 CSMD1Q96PZ7 3565 aa6.9□□□□□ -1.31
CPNE4-209ENST00000512055 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.31
CPNE4-209ENST00000512055 SPENQ96T58 3664 aaKnown RBP6.88□□□□□ -1.31
CPNE4-209ENST00000512055 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
CPNE4-209ENST00000512055 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
CPNE4-209ENST00000512055 HRES1P13985 223 aa6.86□□□□□ -1.31
CPNE4-209ENST00000512055 NIPBLQ6KC79 2804 aaeCLIP6.86□□□□□ -1.31
CPNE4-209ENST00000512055 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
CPNE4-209ENST00000512055 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
CPNE4-209ENST00000512055 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
CPNE4-209ENST00000512055 ROMO1P60602 79 aa6.82□□□□□ -1.32
CPNE4-209ENST00000512055 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
CPNE4-209ENST00000512055 OXTP01178 125 aa6.8□□□□□ -1.32
CPNE4-209ENST00000512055 A0A087WTM6 91 aa6.8□□□□□ -1.32
CPNE4-209ENST00000512055 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
CPNE4-209ENST00000512055 ZNF861PO60384 105 aa6.79□□□□□ -1.32
CPNE4-209ENST00000512055 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
CPNE4-209ENST00000512055 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
CPNE4-209ENST00000512055 KMT2BQ9UMN6 2715 aaPredicted RBP6.75□□□□□ -1.33
CPNE4-209ENST00000512055 KRTAP26-1Q6PEX3 210 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms