RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 LINC01545Q5VT33 79 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 SNHG12Q9BXW3 62 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 ST20Q9HBF5 79 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 NXT2Q9NPJ8 142 aaKnown RBP1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 UQCR10Q9UDW1 63 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 TIMM8BQ9Y5J9 83 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 TACC2O95359 2948 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 HIVEP1P15822 2718 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 LRBAP50851 2863 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 TEP1Q99973 2627 aaKnown RBP1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 CCDC179H3BU77 68 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 K7ERU9 68 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 M0R143 59 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 PPP1R17O96001 155 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 MGPP08493 103 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 IGLC3P0DOY3 106 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 IFI27P40305 119 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 DEFB131AP59861 70 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 DEFB136Q30KP8 78 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 COL5A1-AS1Q5SY13 56 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 Q8N8P6 123 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 IFI27L1Q96BM0 104 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 PMCHL2Q9BQD1 86 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 DPH3P1Q9H4G8 78 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 WNK1Q9H4A3 2382 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 SVEP1Q4LDE5 3571 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 ITPR2Q14571 2701 aa1.29□□□□□ -2.2
HMGB1P47-201ENST00000511281 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 JMJD1CQ15652 2540 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 ANKRD17O75179 2603 aaKnown RBP1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 TRAV12-2A0A075B6T6 113 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 TRAV12-3A0A0B4J271 114 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 A0A1B0GV90 55 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 A8MTW9 85 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 K7EMI3 77 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 COX8AP10176 69 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 PLNP26678 52 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 FCER1GP30273 86 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 SPINK13Q1W4C9 94 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 DEFB114Q30KQ6 69 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 RPL39LQ96EH5 51 aaKnown RBP1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 SMIM2Q9BVW6 85 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 ACANP16112 2415 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 SETD2Q9BYW2 2564 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 NF1P21359 2839 aa1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 HRNRQ86YZ3 2850 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P47-201ENST00000511281 ANK3Q12955 4377 aaKnown RBP1.28□□□□□ -2.21
HMGB1P47-201ENST00000511281 TEX49A0A1B0GTD5 131 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 LINC01549A6NIU2 74 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 M0QY20 66 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 DLEU1O43261 78 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 SEC11AP67812 179 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 HSD52Q0P140 79 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 BVES-AS1Q5T3Y7 98 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 FAM74A4Q5TZK3 123 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 TMEM141Q96I45 108 aa1.27□□□□□ -2.21
HMGB1P47-201ENST00000511281 ZANQ9Y493 2812 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 CENPEQ02224 2701 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 MYMXA0A1B0GTQ4 84 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 F8VRH5 84 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 POLR2KP53803 58 aaKnown RBP1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 ZNF56Q15929 161 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 HIGD1BQ9P298 99 aa1.26□□□□□ -2.21
HMGB1P47-201ENST00000511281 ATRQ13535 2644 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 TRBV25-1A0A075B6N4 114 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 TRGV1A0A0A0MS02 117 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 ZNF815PA8K554 130 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 I3L3M4 83 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 HTN1P15515 57 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 RPL39P62891 51 aaKnown RBP1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 KLKP1Q107X0 134 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 CFAP126Q5VTH2 177 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 DEFB104AQ8WTQ1 72 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 TMEM263Q8WUH6 116 aaKnown RBP1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 ITPR3Q14573 2671 aa1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 MAP1AP78559 2803 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P47-201ENST00000511281 FLNAP21333 2647 aaKnown RBP1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 STAB1Q9NY15 2570 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 DOCK11Q5JSL3 2073 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 TRBV7-3A0A075B6L6 115 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 K7EP13 123 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 UBE2D3P61077 147 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 UBE2D2P62837 147 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 TMEM170BQ5T4T1 132 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 Q6ZUT4 128 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 AMELXQ99217 191 aa1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 NOP10Q9NPE3 64 aaKnown RBP1.24□□□□□ -2.21
HMGB1P47-201ENST00000511281 H3BUT2 72 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 K7EP34 96 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 SMIM13P0DJ93 91 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 UBE2D1P51668 147 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 GTF2H5Q6ZYL4 71 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 NDUFA12Q9UI09 145 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms