RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 MT2AP02795 61 aa4.69□□□□□ -1.66
PTPN20-216ENST00000506080 Q75L30 129 aa4.69□□□□□ -1.66
PTPN20-216ENST00000506080 FABP4P15090 132 aa4.68□□□□□ -1.66
PTPN20-216ENST00000506080 LITAFQ99732 161 aa4.68□□□□□ -1.66
PTPN20-216ENST00000506080 IGLV5-48A0A075B6I7 105 aa4.67□□□□□ -1.66
PTPN20-216ENST00000506080 E9PLD3 99 aa4.66□□□□□ -1.66
PTPN20-216ENST00000506080 MT1FP04733 61 aa4.66□□□□□ -1.66
PTPN20-216ENST00000506080 A0A1B0GWB2 263 aa4.65□□□□□ -1.66
PTPN20-216ENST00000506080 APOC3P02656 99 aa4.65□□□□□ -1.66
PTPN20-216ENST00000506080 LINC00518Q8N0U6 118 aa4.65□□□□□ -1.66
PTPN20-216ENST00000506080 HSPB8Q9UJY1 196 aa4.65□□□□□ -1.66
PTPN20-216ENST00000506080 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
PTPN20-216ENST00000506080 TRBV7-6A0A0J9YX20 115 aa4.64□□□□□ -1.67
PTPN20-216ENST00000506080 TIMM17BO60830 172 aa4.64□□□□□ -1.67
PTPN20-216ENST00000506080 SERF1AO75920 110 aa4.64□□□□□ -1.67
PTPN20-216ENST00000506080 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 Q96NJ1 140 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 YPEL4Q96NS1 127 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 F8WEM9 126 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 TTTY13Q9BZ97 58 aa4.63□□□□□ -1.67
PTPN20-216ENST00000506080 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
PTPN20-216ENST00000506080 ZNF815PA8K554 130 aa4.62□□□□□ -1.67
PTPN20-216ENST00000506080 SNAPINO95295 136 aa4.62□□□□□ -1.67
PTPN20-216ENST00000506080 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
PTPN20-216ENST00000506080 A6NDN8 102 aa4.61□□□□□ -1.67
PTPN20-216ENST00000506080 TRGC2P03986 189 aa4.61□□□□□ -1.67
PTPN20-216ENST00000506080 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
PTPN20-216ENST00000506080 SVBPQ8N300 66 aa4.61□□□□□ -1.67
PTPN20-216ENST00000506080 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
PTPN20-216ENST00000506080 IGFL1Q6UW32 110 aa4.6□□□□□ -1.67
PTPN20-216ENST00000506080 NDUFA5Q16718 116 aa4.59□□□□□ -1.67
PTPN20-216ENST00000506080 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
PTPN20-216ENST00000506080 LINC00846Q9NV44 126 aa4.59□□□□□ -1.67
PTPN20-216ENST00000506080 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
PTPN20-216ENST00000506080 A4D1N5 150 aa4.58□□□□□ -1.68
PTPN20-216ENST00000506080 LST1O00453 97 aa4.58□□□□□ -1.68
PTPN20-216ENST00000506080 Q6JHZ5 121 aa4.58□□□□□ -1.68
PTPN20-216ENST00000506080 SLC7A5P1Q8MH63 180 aa4.58□□□□□ -1.68
PTPN20-216ENST00000506080 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
PTPN20-216ENST00000506080 A8MUU9 505 aa4.57□□□□□ -1.68
PTPN20-216ENST00000506080 SMIM11BQ8TCY0 68 aa4.57□□□□□ -1.68
PTPN20-216ENST00000506080 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
PTPN20-216ENST00000506080 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 OCIAD2Q56VL3 154 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 Q6ZQY7 126 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 MUSTN1Q8IVN3 82 aa4.55□□□□□ -1.68
PTPN20-216ENST00000506080 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 IFITM1P13164 125 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 LINC00575Q6W349 94 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 COPS9Q8WXC6 57 aa4.54□□□□□ -1.68
PTPN20-216ENST00000506080 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
PTPN20-216ENST00000506080 LINC01545Q5VT33 79 aa4.53□□□□□ -1.68
PTPN20-216ENST00000506080 RBM12B-AS1Q9P1G2 102 aa4.53□□□□□ -1.68
PTPN20-216ENST00000506080 H3BUT2 72 aa4.52□□□□□ -1.69
PTPN20-216ENST00000506080 DSCR10P59022 87 aa4.52□□□□□ -1.69
PTPN20-216ENST00000506080 VAMP3Q15836 100 aa4.52□□□□□ -1.69
PTPN20-216ENST00000506080 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
PTPN20-216ENST00000506080 HRES1P13985 223 aa4.51□□□□□ -1.69
PTPN20-216ENST00000506080 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
PTPN20-216ENST00000506080 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
PTPN20-216ENST00000506080 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
PTPN20-216ENST00000506080 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
PTPN20-216ENST00000506080 Q6ZVH6 145 aa4.49□□□□□ -1.69
PTPN20-216ENST00000506080 NEBP20929 6669 aa4.49□□□□□ -1.69
PTPN20-216ENST00000506080 SNHG12Q9BXW3 62 aa4.48□□□□□ -1.69
PTPN20-216ENST00000506080 C3orf79P0CE67 100 aa4.47□□□□□ -1.69
PTPN20-216ENST00000506080 A0A087WSZ3 146 aa4.46□□□□□ -1.69
PTPN20-216ENST00000506080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.46□□□□□ -1.69
PTPN20-216ENST00000506080 SCGB1D1O95968 90 aa4.46□□□□□ -1.7
PTPN20-216ENST00000506080 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.7
PTPN20-216ENST00000506080 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
PTPN20-216ENST00000506080 COLCA2A8K830 154 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 LINC00313P59037 77 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 KRTDAPP60985 99 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 TEN1Q86WV5 123 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 ATOH7Q8N100 152 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BKO60814 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BJP06899 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BOP23527 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BBP33778 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BDP58876 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BCP62807 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST2H2BEQ16778 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BHQ93079 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BNQ99877 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 HIST1H2BMQ99879 126 aa4.42□□□□□ -1.7
PTPN20-216ENST00000506080 MTURNQ8N3F0 131 aa4.41□□□□□ -1.7
PTPN20-216ENST00000506080 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.7
PTPN20-216ENST00000506080 IGKV4-1P06312 121 aa4.4□□□□□ -1.7
PTPN20-216ENST00000506080 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.7
PTPN20-216ENST00000506080 C12orf57Q99622 126 aa4.4□□□□□ -1.7
PTPN20-216ENST00000506080 A8MWP4 228 aa4.39□□□□□ -1.71
PTPN20-216ENST00000506080 NDUFV3P56181 108 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms