RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	KIAA1109	Q2LD37	5005 aa		7.4	□□□□□ -1.23
MATR3-231	ENST00000502394	SLC25A20	O43772	301 aa		7.39	□□□□□ -1.23
MATR3-231	ENST00000502394	UBE2V1	Q13404	147 aa		7.39	□□□□□ -1.23
MATR3-231	ENST00000502394	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.39	□□□□□ -1.23
MATR3-231	ENST00000502394	SMR3B	P02814	79 aa	Predicted RBP	7.38	□□□□□ -1.23
MATR3-231	ENST00000502394	LINC01547	P58512	204 aa	Predicted RBP	7.38	□□□□□ -1.23
MATR3-231	ENST00000502394		Q6ZQY7	126 aa		7.38	□□□□□ -1.23
MATR3-231	ENST00000502394	LINC01600	Q96MT4	127 aa		7.38	□□□□□ -1.23
MATR3-231	ENST00000502394	PKHD1L1	Q86WI1	4243 aa		7.38	□□□□□ -1.23
MATR3-231	ENST00000502394		C9JAW5	83 aa		7.37	□□□□□ -1.23
MATR3-231	ENST00000502394	RPL37A	P61513	92 aa	Known RBP	7.37	□□□□□ -1.23
MATR3-231	ENST00000502394	HIGD2A	Q9BW72	106 aa		7.37	□□□□□ -1.23
MATR3-231	ENST00000502394	IGLV5-48	A0A075B6I7	105 aa		7.36	□□□□□ -1.23
MATR3-231	ENST00000502394	SNCG	O76070	127 aa		7.36	□□□□□ -1.23
MATR3-231	ENST00000502394	DNAL4	O96015	105 aa		7.36	□□□□□ -1.23
MATR3-231	ENST00000502394		H3BT86	120 aa		7.35	□□□□□ -1.23
MATR3-231	ENST00000502394	OCIAD2	Q56VL3	154 aa		7.35	□□□□□ -1.23
MATR3-231	ENST00000502394	MTURN	Q8N3F0	131 aa		7.35	□□□□□ -1.23
MATR3-231	ENST00000502394	ST20-AS1	Q8NBB2	130 aa		7.35	□□□□□ -1.23
MATR3-231	ENST00000502394	KRTAP17-1	Q9BYP8	105 aa		7.35	□□□□□ -1.23
MATR3-231	ENST00000502394	ORMDL1	Q9P0S3	153 aa		7.34	□□□□□ -1.23
MATR3-231	ENST00000502394	BAALC-AS2	P0C853	105 aa		7.33	□□□□□ -1.24
MATR3-231	ENST00000502394	SPRR1B	P22528	89 aa		7.33	□□□□□ -1.24
MATR3-231	ENST00000502394		Q8N377	158 aa		7.33	□□□□□ -1.24
MATR3-231	ENST00000502394		F8W1H4	67 aa		7.32	□□□□□ -1.24
MATR3-231	ENST00000502394		H3BQ85	93 aa		7.32	□□□□□ -1.24
MATR3-231	ENST00000502394	PPDPFL	Q8WWR9	84 aa		7.32	□□□□□ -1.24
MATR3-231	ENST00000502394	SPRR4	Q96PI1	79 aa		7.32	□□□□□ -1.24
MATR3-231	ENST00000502394	LINC00483	Q53H64	154 aa		7.31	□□□□□ -1.24
MATR3-231	ENST00000502394	ANKRD29	Q8N6D5	301 aa		7.31	□□□□□ -1.24
MATR3-231	ENST00000502394	TMEM256-PLSCR3	K7ERE1	68 aa		7.3	□□□□□ -1.24
MATR3-231	ENST00000502394	SMIM29	Q86T20	159 aa		7.3	□□□□□ -1.24
MATR3-231	ENST00000502394	SRRM2	Q9UQ35	2752 aa	Known RBP	7.29	□□□□□ -1.24
MATR3-231	ENST00000502394	TEX49	A0A1B0GTD5	131 aa		7.29	□□□□□ -1.24
MATR3-231	ENST00000502394		Q5VSD8	79 aa		7.28	□□□□□ -1.24
MATR3-231	ENST00000502394	SPINK6	Q6UWN8	80 aa		7.28	□□□□□ -1.24
MATR3-231	ENST00000502394	DEFB105A	Q8NG35	78 aa		7.28	□□□□□ -1.24
MATR3-231	ENST00000502394	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.28	□□□□□ -1.24
MATR3-231	ENST00000502394	HERC2	O95714	4834 aa		7.27	□□□□□ -1.25
MATR3-231	ENST00000502394	KRTAP1-4	P0C5Y4	121 aa		7.27	□□□□□ -1.25
MATR3-231	ENST00000502394	GAGE2A	Q6NT46	116 aa		7.27	□□□□□ -1.25
MATR3-231	ENST00000502394		Q8N1X5	172 aa		7.27	□□□□□ -1.25
MATR3-231	ENST00000502394	KRTAP3-1	Q9BYR8	98 aa		7.27	□□□□□ -1.25
MATR3-231	ENST00000502394	OBSCN-AS1	Q96MR7	158 aa		7.26	□□□□□ -1.25
MATR3-231	ENST00000502394	NDUFV3	P56181	108 aa	Known RBP	7.25	□□□□□ -1.25
MATR3-231	ENST00000502394	C3orf22	Q8N5N4	141 aa		7.25	□□□□□ -1.25
MATR3-231	ENST00000502394	KRTAP4-5	Q9BYR2	181 aa		7.25	□□□□□ -1.25
MATR3-231	ENST00000502394	TEN1	Q86WV5	123 aa		7.24	□□□□□ -1.25
MATR3-231	ENST00000502394	IGLV8-61	A0A075B6I0	122 aa		7.23	□□□□□ -1.25
MATR3-231	ENST00000502394	ETDB	Q3ZM63	59 aa		7.23	□□□□□ -1.25
MATR3-231	ENST00000502394	ANAPC11	Q9NYG5	84 aa		7.23	□□□□□ -1.25
MATR3-231	ENST00000502394	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.21	□□□□□ -1.26
MATR3-231	ENST00000502394	FAM229B	Q4G0N7	80 aa		7.21	□□□□□ -1.26
MATR3-231	ENST00000502394	LAMTOR3	Q9UHA4	124 aa		7.21	□□□□□ -1.26
MATR3-231	ENST00000502394	FAT3	Q8TDW7	4589 aa		7.21	□□□□□ -1.26
MATR3-231	ENST00000502394	TRBV7-4	A0A0J9YYF1	115 aa		7.19	□□□□□ -1.26
MATR3-231	ENST00000502394		A0A087X002	238 aa		7.18	□□□□□ -1.26
MATR3-231	ENST00000502394	RBM3	P98179	157 aa	Known RBP	7.18	□□□□□ -1.26
MATR3-231	ENST00000502394	KRTAP13-2	Q52LG2	175 aa		7.18	□□□□□ -1.26
MATR3-231	ENST00000502394	LOC110117498	A0A087WWA1	95 aa		7.16	□□□□□ -1.26
MATR3-231	ENST00000502394		A0A1B0GV72	72 aa		7.16	□□□□□ -1.26
MATR3-231	ENST00000502394		F8WEM9	126 aa		7.16	□□□□□ -1.26
MATR3-231	ENST00000502394	C14orf132	Q9NPU4	83 aa		7.16	□□□□□ -1.26
MATR3-231	ENST00000502394	LRP1	Q07954	4544 aa	Known RBP	7.16	□□□□□ -1.26
MATR3-231	ENST00000502394	IGLV9-49	A0A0B4J1Y8	123 aa		7.15	□□□□□ -1.26
MATR3-231	ENST00000502394	IGFL1	Q6UW32	110 aa		7.15	□□□□□ -1.26
MATR3-231	ENST00000502394		Q6ZQT0	140 aa		7.15	□□□□□ -1.26
MATR3-231	ENST00000502394		Q8NBF4	154 aa		7.15	□□□□□ -1.26
MATR3-231	ENST00000502394	TNXB	P22105	4242 aa		7.14	□□□□□ -1.27
MATR3-231	ENST00000502394	CRYGA	P11844	174 aa		7.14	□□□□□ -1.27
MATR3-231	ENST00000502394	MOBP	Q13875	183 aa		7.14	□□□□□ -1.27
MATR3-231	ENST00000502394		Q6JHZ5	121 aa		7.14	□□□□□ -1.27
MATR3-231	ENST00000502394	PDE6G	P18545	87 aa		7.13	□□□□□ -1.27
MATR3-231	ENST00000502394	SSBP3-AS1	Q7Z2R9	100 aa		7.13	□□□□□ -1.27
MATR3-231	ENST00000502394	DSCR8	Q96T75	97 aa		7.13	□□□□□ -1.27
MATR3-231	ENST00000502394		A0A0G2JQZ4	141 aa		7.12	□□□□□ -1.27
MATR3-231	ENST00000502394		A0A1W2PNM2	257 aa		7.12	□□□□□ -1.27
MATR3-231	ENST00000502394	C9orf153	Q5TBE3	101 aa		7.12	□□□□□ -1.27
MATR3-231	ENST00000502394	CCK	P06307	115 aa		7.11	□□□□□ -1.27
MATR3-231	ENST00000502394	PRR26	Q8N8Z3	221 aa		7.11	□□□□□ -1.27
MATR3-231	ENST00000502394	ABCA13	Q86UQ4	5058 aa		7.1	□□□□□ -1.27
MATR3-231	ENST00000502394	C21orf62-AS1	Q17RA5	79 aa		7.1	□□□□□ -1.27
MATR3-231	ENST00000502394		Q6Q795	121 aa		7.1	□□□□□ -1.27
MATR3-231	ENST00000502394	MYCBP2	O75592	4640 aa		7.09	□□□□□ -1.27
MATR3-231	ENST00000502394	FLG2	Q5D862	2391 aa	Predicted RBP	7.08	□□□□□ -1.28
MATR3-231	ENST00000502394	KRTAP10-8	P60410	259 aa		7.07	□□□□□ -1.28
MATR3-231	ENST00000502394	TYMSOS	Q8TAI1	123 aa		7.07	□□□□□ -1.28
MATR3-231	ENST00000502394	CD164	Q04900	197 aa		7.06	□□□□□ -1.28
MATR3-231	ENST00000502394	FAM240A	A0A1B0GVK7	77 aa		7.05	□□□□□ -1.28
MATR3-231	ENST00000502394		A0A1B0GW54	56 aa		7.05	□□□□□ -1.28
MATR3-231	ENST00000502394	TRBV7-7	A0A0K0K1E9	115 aa		7.04	□□□□□ -1.28
MATR3-231	ENST00000502394	MT1HL1	P0DM35	61 aa		7.04	□□□□□ -1.28
MATR3-231	ENST00000502394	VPS25	Q9BRG1	176 aa		7.03	□□□□□ -1.28
MATR3-231	ENST00000502394		J3QR89	54 aa		7.02	□□□□□ -1.29
MATR3-231	ENST00000502394	OXT	P01178	125 aa		7.02	□□□□□ -1.29
MATR3-231	ENST00000502394		K7ERU9	68 aa		7.01	□□□□□ -1.29
MATR3-231	ENST00000502394	ACYP1	P07311	99 aa		7.01	□□□□□ -1.29
MATR3-231	ENST00000502394	LINC00304	Q8N9R0	145 aa		7.01	□□□□□ -1.29
MATR3-231	ENST00000502394	LINC00846	Q9NV44	126 aa		7.01	□□□□□ -1.29
MATR3-231	ENST00000502394		A0A087WSZ3	146 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms