RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF815PA8K554 130 aa7.65□□□□□ -1.18
HDAC6-236ENST00000498808 LST1O00453 97 aa7.65□□□□□ -1.18
HDAC6-236ENST00000498808 HRES1P13985 223 aa7.65□□□□□ -1.18
HDAC6-236ENST00000498808 TTTY13Q9BZ97 58 aa7.65□□□□□ -1.18
HDAC6-236ENST00000498808 A6NDN8 102 aa7.64□□□□□ -1.19
HDAC6-236ENST00000498808 APOC3P02656 99 aa7.62□□□□□ -1.19
HDAC6-236ENST00000498808 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
HDAC6-236ENST00000498808 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
HDAC6-236ENST00000498808 OCIAD2Q56VL3 154 aa7.61□□□□□ -1.19
HDAC6-236ENST00000498808 SMIM11BQ8TCY0 68 aa7.6□□□□□ -1.19
HDAC6-236ENST00000498808 SNAPINO95295 136 aa7.59□□□□□ -1.19
HDAC6-236ENST00000498808 TRGC2P03986 189 aa7.59□□□□□ -1.19
HDAC6-236ENST00000498808 Q6ZQY7 126 aa7.59□□□□□ -1.19
HDAC6-236ENST00000498808 SLC7A5P1Q8MH63 180 aa7.59□□□□□ -1.19
HDAC6-236ENST00000498808 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
HDAC6-236ENST00000498808 DSCR10P59022 87 aa7.57□□□□□ -1.2
HDAC6-236ENST00000498808 SVBPQ8N300 66 aa7.57□□□□□ -1.2
HDAC6-236ENST00000498808 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
HDAC6-236ENST00000498808 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
HDAC6-236ENST00000498808 SYS1-DBNDD2H3BUS1 97 aa7.54□□□□□ -1.2
HDAC6-236ENST00000498808 IFITM1P13164 125 aa7.54□□□□□ -1.2
HDAC6-236ENST00000498808 KRTAP20-1Q3LI63 56 aa7.54□□□□□ -1.2
HDAC6-236ENST00000498808 H3BUT2 72 aa7.53□□□□□ -1.2
HDAC6-236ENST00000498808 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
HDAC6-236ENST00000498808 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
HDAC6-236ENST00000498808 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
HDAC6-236ENST00000498808 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
HDAC6-236ENST00000498808 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.21
HDAC6-236ENST00000498808 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
HDAC6-236ENST00000498808 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
HDAC6-236ENST00000498808 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-236ENST00000498808 VAMP3Q15836 100 aa7.49□□□□□ -1.21
HDAC6-236ENST00000498808 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
HDAC6-236ENST00000498808 Q6ZVH6 145 aa7.48□□□□□ -1.21
HDAC6-236ENST00000498808 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-236ENST00000498808 SNHG12Q9BXW3 62 aa7.46□□□□□ -1.22
HDAC6-236ENST00000498808 A0A087WSZ3 146 aa7.45□□□□□ -1.22
HDAC6-236ENST00000498808 A8MWP4 228 aa7.45□□□□□ -1.22
HDAC6-236ENST00000498808 SCGB1D1O95968 90 aa7.45□□□□□ -1.22
HDAC6-236ENST00000498808 PPDPFLQ8WWR9 84 aa7.45□□□□□ -1.22
HDAC6-236ENST00000498808 LINC00313P59037 77 aa7.44□□□□□ -1.22
HDAC6-236ENST00000498808 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
HDAC6-236ENST00000498808 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
HDAC6-236ENST00000498808 COLCA2A8K830 154 aa7.43□□□□□ -1.22
HDAC6-236ENST00000498808 MTURNQ8N3F0 131 aa7.43□□□□□ -1.22
HDAC6-236ENST00000498808 SIGMAR1Q99720 223 aa7.43□□□□□ -1.22
HDAC6-236ENST00000498808 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
HDAC6-236ENST00000498808 IGKV4-1P06312 121 aa7.34□□□□□ -1.23
HDAC6-236ENST00000498808 NDUFV3P56181 108 aaKnown RBP7.32□□□□□ -1.24
HDAC6-236ENST00000498808 SPINK7P58062 85 aa7.31□□□□□ -1.24
HDAC6-236ENST00000498808 BVES-AS1Q5T3Y7 98 aa7.31□□□□□ -1.24
HDAC6-236ENST00000498808 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
HDAC6-236ENST00000498808 A0A1W2PNM2 257 aa7.3□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 KRTDAPP60985 99 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
HDAC6-236ENST00000498808 C12orf57Q99622 126 aa7.28□□□□□ -1.24
HDAC6-236ENST00000498808 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
HDAC6-236ENST00000498808 IGHV6-1A0A0B4J1U7 121 aa7.26□□□□□ -1.25
HDAC6-236ENST00000498808 A6NN06 94 aa7.26□□□□□ -1.25
HDAC6-236ENST00000498808 H3BMG7 143 aa7.26□□□□□ -1.25
HDAC6-236ENST00000498808 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
HDAC6-236ENST00000498808 DEFB116Q30KQ4 102 aa7.26□□□□□ -1.25
HDAC6-236ENST00000498808 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
HDAC6-236ENST00000498808 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
HDAC6-236ENST00000498808 KMT2DO14686 5537 aa7.25□□□□□ -1.25
HDAC6-236ENST00000498808 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
HDAC6-236ENST00000498808 S100A1P23297 94 aa7.22□□□□□ -1.25
HDAC6-236ENST00000498808 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
HDAC6-236ENST00000498808 TRBV7-4A0A0J9YYF1 115 aa7.18□□□□□ -1.26
HDAC6-236ENST00000498808 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
HDAC6-236ENST00000498808 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
HDAC6-236ENST00000498808 C8orf87E5RJ46 101 aa7.17□□□□□ -1.26
HDAC6-236ENST00000498808 GHRHP01286 108 aa7.17□□□□□ -1.26
HDAC6-236ENST00000498808 FABP2P12104 132 aa7.17□□□□□ -1.26
HDAC6-236ENST00000498808 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
HDAC6-236ENST00000498808 MT1BP07438 61 aa7.16□□□□□ -1.26
HDAC6-236ENST00000498808 RAB37Q96AX2 223 aa7.16□□□□□ -1.26
HDAC6-236ENST00000498808 SNCGO76070 127 aa7.15□□□□□ -1.26
HDAC6-236ENST00000498808 H0YGX0 51 aa7.14□□□□□ -1.27
HDAC6-236ENST00000498808 SNRPEP62304 92 aaKnown RBP7.14□□□□□ -1.27
HDAC6-236ENST00000498808 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
HDAC6-236ENST00000498808 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
HDAC6-236ENST00000498808 A0A1B0GV72 72 aa7.11□□□□□ -1.27
HDAC6-236ENST00000498808 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
HDAC6-236ENST00000498808 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
HDAC6-236ENST00000498808 HIST1H4GQ99525 98 aa7.09□□□□□ -1.27
HDAC6-236ENST00000498808 A0A1B0GX51 115 aa7.07□□□□□ -1.28
HDAC6-236ENST00000498808 TRACP01848 142 aa7.07□□□□□ -1.28
HDAC6-236ENST00000498808 CCKP06307 115 aa7.06□□□□□ -1.28
HDAC6-236ENST00000498808 Q5VV11 94 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms