RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
PTPRF-214ENST00000496043 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
PTPRF-214ENST00000496043 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
PTPRF-214ENST00000496043 F8WEM9 126 aa6.93□□□□□ -1.3
PTPRF-214ENST00000496043 TCL1BO95988 128 aa6.93□□□□□ -1.3
PTPRF-214ENST00000496043 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
PTPRF-214ENST00000496043 DLEU1O43261 78 aa6.92□□□□□ -1.3
PTPRF-214ENST00000496043 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
PTPRF-214ENST00000496043 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
PTPRF-214ENST00000496043 Q6ZQY7 126 aa6.9□□□□□ -1.3
PTPRF-214ENST00000496043 HIST1H4GQ99525 98 aa6.9□□□□□ -1.3
PTPRF-214ENST00000496043 C12orf57Q99622 126 aa6.9□□□□□ -1.3
PTPRF-214ENST00000496043 Q6JHZ5 121 aa6.89□□□□□ -1.31
PTPRF-214ENST00000496043 OCIAD2Q56VL3 154 aa6.88□□□□□ -1.31
PTPRF-214ENST00000496043 BVES-AS1Q5T3Y7 98 aa6.88□□□□□ -1.31
PTPRF-214ENST00000496043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
PTPRF-214ENST00000496043 SNHG12Q9BXW3 62 aa6.86□□□□□ -1.31
PTPRF-214ENST00000496043 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
PTPRF-214ENST00000496043 UQCR10Q9UDW1 63 aa6.86□□□□□ -1.31
PTPRF-214ENST00000496043 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
PTPRF-214ENST00000496043 PPDPFLQ8WWR9 84 aa6.85□□□□□ -1.31
PTPRF-214ENST00000496043 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
PTPRF-214ENST00000496043 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
PTPRF-214ENST00000496043 TRBV7-7A0A0K0K1E9 115 aa6.83□□□□□ -1.32
PTPRF-214ENST00000496043 SNCGO76070 127 aa6.83□□□□□ -1.32
PTPRF-214ENST00000496043 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
PTPRF-214ENST00000496043 CFC1BP0CG36 223 aa6.82□□□□□ -1.32
PTPRF-214ENST00000496043 CFC1P0CG37 223 aa6.82□□□□□ -1.32
PTPRF-214ENST00000496043 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
PTPRF-214ENST00000496043 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
PTPRF-214ENST00000496043 H0YGX0 51 aa6.8□□□□□ -1.32
PTPRF-214ENST00000496043 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
PTPRF-214ENST00000496043 FXYD2P54710 66 aa6.79□□□□□ -1.32
PTPRF-214ENST00000496043 HSD52Q0P140 79 aa6.79□□□□□ -1.32
PTPRF-214ENST00000496043 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
PTPRF-214ENST00000496043 CEND1Q8N111 149 aa6.79□□□□□ -1.32
PTPRF-214ENST00000496043 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
PTPRF-214ENST00000496043 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
PTPRF-214ENST00000496043 H3BUT2 72 aa6.77□□□□□ -1.33
PTPRF-214ENST00000496043 LST1O00453 97 aa6.77□□□□□ -1.33
PTPRF-214ENST00000496043 MT1HP80294 61 aa6.77□□□□□ -1.33
PTPRF-214ENST00000496043 GHRHP01286 108 aa6.75□□□□□ -1.33
PTPRF-214ENST00000496043 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
PTPRF-214ENST00000496043 Q6Q795 121 aa6.74□□□□□ -1.33
PTPRF-214ENST00000496043 OBSCN-AS1Q96MR7 158 aa6.74□□□□□ -1.33
PTPRF-214ENST00000496043 A0A1B0GX51 115 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 K7ERJ3 54 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 ATP11AUNQ6ZP68 121 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 TEN1Q86WV5 123 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 SS18L2Q9UHA2 77 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
PTPRF-214ENST00000496043 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
PTPRF-214ENST00000496043 A6NJY4 79 aa6.72□□□□□ -1.33
PTPRF-214ENST00000496043 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
PTPRF-214ENST00000496043 Q75L30 129 aa6.71□□□□□ -1.34
PTPRF-214ENST00000496043 H3BMG7 143 aa6.7□□□□□ -1.34
PTPRF-214ENST00000496043 M0R2T5 61 aa6.7□□□□□ -1.34
PTPRF-214ENST00000496043 FABP2P12104 132 aa6.7□□□□□ -1.34
PTPRF-214ENST00000496043 Q96NJ1 140 aa6.7□□□□□ -1.34
PTPRF-214ENST00000496043 A0A087WSZ3 146 aa6.67□□□□□ -1.34
PTPRF-214ENST00000496043 M0R143 59 aa6.67□□□□□ -1.34
PTPRF-214ENST00000496043 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
PTPRF-214ENST00000496043 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
PTPRF-214ENST00000496043 H3BQ85 93 aa6.65□□□□□ -1.34
PTPRF-214ENST00000496043 TRIAP1O43715 76 aa6.65□□□□□ -1.34
PTPRF-214ENST00000496043 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
PTPRF-214ENST00000496043 BATFQ16520 125 aa6.65□□□□□ -1.34
PTPRF-214ENST00000496043 DNAL4O96015 105 aa6.63□□□□□ -1.35
PTPRF-214ENST00000496043 PSMB2P49721 201 aa6.63□□□□□ -1.35
PTPRF-214ENST00000496043 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
PTPRF-214ENST00000496043 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
PTPRF-214ENST00000496043 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
PTPRF-214ENST00000496043 A8MUU9 505 aa6.62□□□□□ -1.35
PTPRF-214ENST00000496043 COX6CP09669 75 aa6.62□□□□□ -1.35
PTPRF-214ENST00000496043 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
PTPRF-214ENST00000496043 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
PTPRF-214ENST00000496043 TMEM256-PLSCR3K7ERE1 68 aa6.61□□□□□ -1.35
PTPRF-214ENST00000496043 NAA38Q9BRA0 125 aaKnown RBP6.6□□□□□ -1.35
PTPRF-214ENST00000496043 TRBV7-4A0A0J9YYF1 115 aa6.59□□□□□ -1.35
PTPRF-214ENST00000496043 DSCR10P59022 87 aa6.59□□□□□ -1.35
PTPRF-214ENST00000496043 LINC00313P59037 77 aa6.58□□□□□ -1.36
PTPRF-214ENST00000496043 SIGMAR1Q99720 223 aa6.58□□□□□ -1.36
PTPRF-214ENST00000496043 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
PTPRF-214ENST00000496043 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
PTPRF-214ENST00000496043 TRBV20-1A0A075B6N2 111 aa6.56□□□□□ -1.36
PTPRF-214ENST00000496043 A0A1B0GV72 72 aa6.56□□□□□ -1.36
PTPRF-214ENST00000496043 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
PTPRF-214ENST00000496043 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
PTPRF-214ENST00000496043 CCKP06307 115 aa6.54□□□□□ -1.36
PTPRF-214ENST00000496043 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
PTPRF-214ENST00000496043 TRACP01848 142 aa6.53□□□□□ -1.36
PTPRF-214ENST00000496043 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
PTPRF-214ENST00000496043 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
PTPRF-214ENST00000496043 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
PTPRF-214ENST00000496043 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
PTPRF-214ENST00000496043 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
PTPRF-214ENST00000496043 RBM3P98179 157 aaKnown RBP6.5□□□□□ -1.37
PTPRF-214ENST00000496043 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
PTPRF-214ENST00000496043 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms