RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 M0R378 163 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 HSD52Q0P140 79 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
VIM-207ENST00000495528 OR13C6PQ8NH95 151 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 LINC00167Q96N53 147 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 PSORS1C2Q9UIG4 136 aa3.82□□□□□ -1.8
VIM-207ENST00000495528 A6NDN8 102 aa3.81□□□□□ -1.8
VIM-207ENST00000495528 NDUFC2O95298 119 aa3.81□□□□□ -1.8
VIM-207ENST00000495528 FXYD2P54710 66 aa3.81□□□□□ -1.8
VIM-207ENST00000495528 PRR4Q16378 134 aa3.81□□□□□ -1.8
VIM-207ENST00000495528 BATFQ16520 125 aa3.81□□□□□ -1.8
VIM-207ENST00000495528 IGKV2-28A0A075B6P5 120 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 M0QXV9 152 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 IGKV2D-28P01615 120 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 C1orf137Q5JT78 98 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 MRPL55Q7Z7F7 128 aaKnown RBP3.8□□□□□ -1.8
VIM-207ENST00000495528 RAB37Q96AX2 223 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 PPDPFQ9H3Y8 114 aa3.8□□□□□ -1.8
VIM-207ENST00000495528 TRBV10-3A0A0K0K1G6 114 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 H7C2G1 150 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 M0R143 59 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 UBE2BP63146 152 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 LINC00337Q8N6G1 96 aa3.79□□□□□ -1.8
VIM-207ENST00000495528 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
VIM-207ENST00000495528 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
VIM-207ENST00000495528 TRAV13-2A0A0B4J235 113 aa3.78□□□□□ -1.8
VIM-207ENST00000495528 IGLV7-43P04211 117 aa3.78□□□□□ -1.8
VIM-207ENST00000495528 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
VIM-207ENST00000495528 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
VIM-207ENST00000495528 K7ERJ3 54 aa3.77□□□□□ -1.81
VIM-207ENST00000495528 IGLV6-57P01721 117 aa3.77□□□□□ -1.81
VIM-207ENST00000495528 RPL13AP40429 203 aaKnown RBP3.77□□□□□ -1.81
VIM-207ENST00000495528 DIRC1Q969H9 104 aa3.77□□□□□ -1.81
VIM-207ENST00000495528 SNHG12Q9BXW3 62 aa3.77□□□□□ -1.81
VIM-207ENST00000495528 A0A0B4J2C4 111 aa3.76□□□□□ -1.81
VIM-207ENST00000495528 A0A1B0GWB2 263 aa3.76□□□□□ -1.81
VIM-207ENST00000495528 SMIM11BQ8TCY0 68 aa3.76□□□□□ -1.81
VIM-207ENST00000495528 KCNQ1DNQ9H478 68 aa3.76□□□□□ -1.81
VIM-207ENST00000495528 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
VIM-207ENST00000495528 TRAV23DV6A0A075B6W5 121 aa3.75□□□□□ -1.81
VIM-207ENST00000495528 PSMB2P49721 201 aa3.75□□□□□ -1.81
VIM-207ENST00000495528 A0A0U1RQV1 116 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 ZNF73O43830 326 aaPredicted RBP3.74□□□□□ -1.81
VIM-207ENST00000495528 VAMP3Q15836 100 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 C6orf99Q4VX62 202 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 FAM19A1Q7Z5A9 133 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 NAA38Q9BRA0 125 aaKnown RBP3.74□□□□□ -1.81
VIM-207ENST00000495528 CBY1Q9Y3M2 126 aa3.74□□□□□ -1.81
VIM-207ENST00000495528 TSPAN13O95857 204 aa3.73□□□□□ -1.81
VIM-207ENST00000495528 SCGB1C2P0DMR2 95 aa3.73□□□□□ -1.81
VIM-207ENST00000495528 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
VIM-207ENST00000495528 COL5A1-AS1Q5SY13 56 aa3.73□□□□□ -1.81
VIM-207ENST00000495528 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
VIM-207ENST00000495528 H3BUT2 72 aa3.72□□□□□ -1.81
VIM-207ENST00000495528 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
VIM-207ENST00000495528 BCE1O60756 84 aa3.72□□□□□ -1.81
VIM-207ENST00000495528 COX7BP24311 80 aa3.72□□□□□ -1.81
VIM-207ENST00000495528 UBE2AP49459 152 aa3.72□□□□□ -1.81
VIM-207ENST00000495528 TRBV7-6A0A0J9YX20 115 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 H0YGX0 51 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 COX6CP09669 75 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 SPRR1AP35321 89 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 PRLHP81277 87 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 SMCR5Q8TEV8 140 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
VIM-207ENST00000495528 MUC17Q685J3 4493 aa3.7□□□□□ -1.82
VIM-207ENST00000495528 ZNF861PO60384 105 aa3.7□□□□□ -1.82
VIM-207ENST00000495528 ELOF1P60002 83 aaKnown RBP3.7□□□□□ -1.82
VIM-207ENST00000495528 LINC00575Q6W349 94 aa3.7□□□□□ -1.82
VIM-207ENST00000495528 CLEC2BQ92478 149 aa3.7□□□□□ -1.82
VIM-207ENST00000495528 HIGD2AQ9BW72 106 aa3.7□□□□□ -1.82
VIM-207ENST00000495528 hADV29S1A0JD25 119 aa3.69□□□□□ -1.82
VIM-207ENST00000495528 SLC25A20O43772 301 aa3.69□□□□□ -1.82
VIM-207ENST00000495528 ERC2-IT1O76042 136 aa3.69□□□□□ -1.82
VIM-207ENST00000495528 Q6ZRX8 168 aa3.69□□□□□ -1.82
VIM-207ENST00000495528 Q9BRP9 147 aa3.69□□□□□ -1.82
VIM-207ENST00000495528 A0A1W2PPM0 123 aa3.68□□□□□ -1.82
VIM-207ENST00000495528 SNCGO76070 127 aa3.68□□□□□ -1.82
VIM-207ENST00000495528 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
VIM-207ENST00000495528 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
VIM-207ENST00000495528 TCL1BO95988 128 aa3.67□□□□□ -1.82
VIM-207ENST00000495528 FABP2P12104 132 aa3.67□□□□□ -1.82
VIM-207ENST00000495528 ST20-AS1Q8NBB2 130 aa3.67□□□□□ -1.82
VIM-207ENST00000495528 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
VIM-207ENST00000495528 LST1O00453 97 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 CRYGAP11844 174 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 ATXN8Q156A1 80 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 LYRM7Q5U5X0 104 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 Q6ZQY7 126 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 SPCS1Q9Y6A9 102 aa3.65□□□□□ -1.83
VIM-207ENST00000495528 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 A0A1B0GX51 115 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 H3BMG7 143 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 DNAL4O96015 105 aa3.64□□□□□ -1.83
VIM-207ENST00000495528 TRACP01848 142 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms