RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
ITGB1-217ENST00000494395 LPAP08519 4548 aa5.03□□□□□ -1.6
ITGB1-217ENST00000494395 LINC01547P58512 204 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-217ENST00000494395 MOBPQ13875 183 aa5.02□□□□□ -1.61
ITGB1-217ENST00000494395 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
ITGB1-217ENST00000494395 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
ITGB1-217ENST00000494395 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
ITGB1-217ENST00000494395 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
ITGB1-217ENST00000494395 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
ITGB1-217ENST00000494395 PRR4Q16378 134 aa5.01□□□□□ -1.61
ITGB1-217ENST00000494395 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
ITGB1-217ENST00000494395 C12orf57Q99622 126 aa5□□□□□ -1.61
ITGB1-217ENST00000494395 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
ITGB1-217ENST00000494395 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
ITGB1-217ENST00000494395 CFC1BP0CG36 223 aa4.99□□□□□ -1.61
ITGB1-217ENST00000494395 CFC1P0CG37 223 aa4.99□□□□□ -1.61
ITGB1-217ENST00000494395 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
ITGB1-217ENST00000494395 Q75L30 129 aa4.99□□□□□ -1.61
ITGB1-217ENST00000494395 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
ITGB1-217ENST00000494395 SPINK1P00995 79 aa4.98□□□□□ -1.61
ITGB1-217ENST00000494395 TAL2Q16559 108 aa4.98□□□□□ -1.61
ITGB1-217ENST00000494395 A0A0B4J2C4 111 aa4.97□□□□□ -1.61
ITGB1-217ENST00000494395 TEX49A0A1B0GTD5 131 aa4.97□□□□□ -1.61
ITGB1-217ENST00000494395 LINC00575Q6W349 94 aa4.97□□□□□ -1.61
ITGB1-217ENST00000494395 CEND1Q8N111 149 aa4.97□□□□□ -1.61
ITGB1-217ENST00000494395 FXYD2P54710 66 aa4.96□□□□□ -1.62
ITGB1-217ENST00000494395 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
ITGB1-217ENST00000494395 Q8N377 158 aa4.96□□□□□ -1.62
ITGB1-217ENST00000494395 NHP2Q9NX24 153 aaKnown RBP4.96□□□□□ -1.62
ITGB1-217ENST00000494395 VAMP3Q15836 100 aa4.95□□□□□ -1.62
ITGB1-217ENST00000494395 TPRXLQ17RH7 258 aa4.95□□□□□ -1.62
ITGB1-217ENST00000494395 Q1RN00 199 aa4.95□□□□□ -1.62
ITGB1-217ENST00000494395 DEFB105AQ8NG35 78 aa4.95□□□□□ -1.62
ITGB1-217ENST00000494395 LAMTOR3Q9UHA4 124 aa4.95□□□□□ -1.62
ITGB1-217ENST00000494395 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
ITGB1-217ENST00000494395 hADV29S1A0JD25 119 aa4.94□□□□□ -1.62
ITGB1-217ENST00000494395 BVES-AS1Q5T3Y7 98 aa4.94□□□□□ -1.62
ITGB1-217ENST00000494395 Q6ZQY7 126 aa4.94□□□□□ -1.62
ITGB1-217ENST00000494395 FP248Q71RG6 208 aaPredicted RBP4.94□□□□□ -1.62
ITGB1-217ENST00000494395 SLC25A20O43772 301 aa4.93□□□□□ -1.62
ITGB1-217ENST00000494395 HSD52Q0P140 79 aa4.93□□□□□ -1.62
ITGB1-217ENST00000494395 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
ITGB1-217ENST00000494395 RAB37Q96AX2 223 aa4.92□□□□□ -1.62
ITGB1-217ENST00000494395 H7C2G1 150 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 CD164Q04900 197 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-217ENST00000494395 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 PRO1933Q9H354 126 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 UQCR10Q9UDW1 63 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
ITGB1-217ENST00000494395 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
ITGB1-217ENST00000494395 A0A0G2JQZ4 141 aa4.9□□□□□ -1.63
ITGB1-217ENST00000494395 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
ITGB1-217ENST00000494395 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
ITGB1-217ENST00000494395 H0YGX0 51 aa4.89□□□□□ -1.63
ITGB1-217ENST00000494395 Q5XG85 94 aa4.89□□□□□ -1.63
ITGB1-217ENST00000494395 HRCT1Q6UXD1 115 aa4.89□□□□□ -1.63
ITGB1-217ENST00000494395 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-217ENST00000494395 PPDPFLQ8WWR9 84 aa4.89□□□□□ -1.63
ITGB1-217ENST00000494395 LIMD2Q9BT23 127 aa4.88□□□□□ -1.63
ITGB1-217ENST00000494395 A0A1B0GX51 115 aa4.87□□□□□ -1.63
ITGB1-217ENST00000494395 K7ERJ3 54 aa4.87□□□□□ -1.63
ITGB1-217ENST00000494395 SMIM6P0DI80 62 aa4.87□□□□□ -1.63
ITGB1-217ENST00000494395 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 LOC105371267A0A1B0GV96 52 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 F8WEM9 126 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 OCIAD2Q56VL3 154 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 Q6JHZ5 121 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
ITGB1-217ENST00000494395 CLEC2BQ92478 149 aa4.84□□□□□ -1.63
ITGB1-217ENST00000494395 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
ITGB1-217ENST00000494395 H3BUT2 72 aa4.82□□□□□ -1.64
ITGB1-217ENST00000494395 SNCGO76070 127 aa4.82□□□□□ -1.64
ITGB1-217ENST00000494395 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
ITGB1-217ENST00000494395 SNHG12Q9BXW3 62 aa4.82□□□□□ -1.64
ITGB1-217ENST00000494395 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
ITGB1-217ENST00000494395 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
ITGB1-217ENST00000494395 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
ITGB1-217ENST00000494395 PSMB2P49721 201 aa4.8□□□□□ -1.64
ITGB1-217ENST00000494395 Q6Q795 121 aa4.8□□□□□ -1.64
ITGB1-217ENST00000494395 MUC2Q02817 5179 aa4.8□□□□□ -1.64
ITGB1-217ENST00000494395 COX6CP09669 75 aa4.79□□□□□ -1.64
ITGB1-217ENST00000494395 M0R143 59 aa4.78□□□□□ -1.64
ITGB1-217ENST00000494395 LST1O00453 97 aa4.78□□□□□ -1.64
ITGB1-217ENST00000494395 TCL1BO95988 128 aa4.78□□□□□ -1.64
ITGB1-217ENST00000494395 ORMDL1Q9P0S3 153 aa4.78□□□□□ -1.64
ITGB1-217ENST00000494395 H3BMG7 143 aa4.77□□□□□ -1.65
ITGB1-217ENST00000494395 DNAL4O96015 105 aa4.77□□□□□ -1.65
ITGB1-217ENST00000494395 TRACP01848 142 aa4.77□□□□□ -1.65
ITGB1-217ENST00000494395 FABP2P12104 132 aa4.77□□□□□ -1.65
ITGB1-217ENST00000494395 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
ITGB1-217ENST00000494395 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
ITGB1-217ENST00000494395 TSTD3H0UI37 97 aa4.76□□□□□ -1.65
ITGB1-217ENST00000494395 H3BQ85 93 aa4.76□□□□□ -1.65
ITGB1-217ENST00000494395 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
ITGB1-217ENST00000494395 C9orf92A6NGG3 77 aa4.75□□□□□ -1.65
ITGB1-217ENST00000494395 TMEM256-PLSCR3K7ERE1 68 aa4.75□□□□□ -1.65
ITGB1-217ENST00000494395 NAA38Q9BRA0 125 aaKnown RBP4.74□□□□□ -1.65
ITGB1-217ENST00000494395 A0A087WSZ3 146 aa4.73□□□□□ -1.65
ITGB1-217ENST00000494395 SCGB1C2P0DMR2 95 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms