RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 SPINK1P00995 79 aa0.76□□□□□ -2.29
SSB-212ENST00000494051 DEFB131AP59861 70 aa0.76□□□□□ -2.29
SSB-212ENST00000494051 NOP10Q9NPE3 64 aaKnown RBP0.76□□□□□ -2.29
SSB-212ENST00000494051 DUOX1Q9NRD9 1551 aa0.75□□□□□ -2.29
SSB-212ENST00000494051 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
SSB-212ENST00000494051 GCC2Q8IWJ2 1684 aa0.74□□□□□ -2.29
SSB-212ENST00000494051 NAV3Q8IVL0 2385 aa0.73□□□□□ -2.29
SSB-212ENST00000494051 IGLV5-48A0A075B6I7 105 aa0.73□□□□□ -2.29
SSB-212ENST00000494051 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
SSB-212ENST00000494051 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.73□□□□□ -2.29
SSB-212ENST00000494051 AHCTF1Q8WYP5 2266 aa0.73□□□□□ -2.29
SSB-212ENST00000494051 ANKRD17O75179 2603 aaKnown RBP0.72□□□□□ -2.29
SSB-212ENST00000494051 PTPRQQ9UMZ3 2332 aa0.71□□□□□ -2.3
SSB-212ENST00000494051 M0R2T5 61 aa0.71□□□□□ -2.3
SSB-212ENST00000494051 RPL39P62891 51 aaKnown RBP0.71□□□□□ -2.3
SSB-212ENST00000494051 M0QY20 66 aa0.7□□□□□ -2.3
SSB-212ENST00000494051 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
SSB-212ENST00000494051 U3KQA8 63 aa0.69□□□□□ -2.3
SSB-212ENST00000494051 ASH1LQ9NR48 2969 aaKnown RBP0.68□□□□□ -2.3
SSB-212ENST00000494051 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
SSB-212ENST00000494051 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
SSB-212ENST00000494051 BPTFQ12830 3046 aa0.67□□□□□ -2.3
SSB-212ENST00000494051 DOPEY2Q9Y3R5 2298 aa0.67□□□□□ -2.3
SSB-212ENST00000494051 CNOT1A5YKK6 2376 aaKnown RBP0.67□□□□□ -2.3
SSB-212ENST00000494051 ARHGAP5-AS1Q96IT6 56 aa0.67□□□□□ -2.3
SSB-212ENST00000494051 PIEZO2Q9H5I5 2752 aa0.67□□□□□ -2.3
SSB-212ENST00000494051 LEAP2Q969E1 77 aa0.66□□□□□ -2.3
SSB-212ENST00000494051 TOMM7Q9P0U1 55 aa0.66□□□□□ -2.3
SSB-212ENST00000494051 PTPRZ1P23471 2315 aaPredicted RBP0.66□□□□□ -2.3
SSB-212ENST00000494051 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
SSB-212ENST00000494051 SMR3AQ99954 134 aa0.65□□□□□ -2.31
SSB-212ENST00000494051 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.31
SSB-212ENST00000494051 ALMS1Q8TCU4 4167 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 A8MTW9 85 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 TTTY10Q9BZA0 68 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 WNK2Q9Y3S1 2297 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 TTC28Q96AY4 2481 aa0.64□□□□□ -2.31
SSB-212ENST00000494051 H3BNG1 76 aa0.63□□□□□ -2.31
SSB-212ENST00000494051 CLPSL2Q6UWE3 100 aa0.62□□□□□ -2.31
SSB-212ENST00000494051 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
SSB-212ENST00000494051 M0QZ58 72 aa0.61□□□□□ -2.31
SSB-212ENST00000494051 C2CD3Q4AC94 2353 aa0.61□□□□□ -2.31
SSB-212ENST00000494051 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
SSB-212ENST00000494051 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
SSB-212ENST00000494051 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
SSB-212ENST00000494051 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
SSB-212ENST00000494051 SPTBN2O15020 2390 aa0.59□□□□□ -2.31
SSB-212ENST00000494051 H3BSH0 61 aa0.59□□□□□ -2.31
SSB-212ENST00000494051 PRM1P04553 51 aa0.59□□□□□ -2.31
SSB-212ENST00000494051 CACNA1HO95180 2353 aa0.59□□□□□ -2.32
SSB-212ENST00000494051 TNP1P09430 55 aa0.58□□□□□ -2.32
SSB-212ENST00000494051 DEFB110Q30KQ9 67 aa0.58□□□□□ -2.32
SSB-212ENST00000494051 DEFB104AQ8WTQ1 72 aa0.57□□□□□ -2.32
SSB-212ENST00000494051 SPART-AS1P0CW21 52 aa0.56□□□□□ -2.32
SSB-212ENST00000494051 PRCDQ00LT1 54 aa0.56□□□□□ -2.32
SSB-212ENST00000494051 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
SSB-212ENST00000494051 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
SSB-212ENST00000494051 PCNX1Q96RV3 2341 aa0.55□□□□□ -2.32
SSB-212ENST00000494051 SPTBN1Q01082 2364 aaKnown RBP0.55□□□□□ -2.32
SSB-212ENST00000494051 CELSR2Q9HCU4 2923 aa0.54□□□□□ -2.32
SSB-212ENST00000494051 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
SSB-212ENST00000494051 TPRP12270 2363 aaKnown RBP0.53□□□□□ -2.32
SSB-212ENST00000494051 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
SSB-212ENST00000494051 LINC01590Q5TEZ4 76 aa0.53□□□□□ -2.32
SSB-212ENST00000494051 ZNF292O60281 2723 aa0.53□□□□□ -2.32
SSB-212ENST00000494051 TENM4Q6N022 2769 aa0.53□□□□□ -2.32
SSB-212ENST00000494051 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.33
SSB-212ENST00000494051 POLQO75417 2590 aa0.52□□□□□ -2.33
SSB-212ENST00000494051 KNL1Q8NG31 2342 aa0.52□□□□□ -2.33
SSB-212ENST00000494051 ABCA12Q86UK0 2595 aa0.52□□□□□ -2.33
SSB-212ENST00000494051 PDE4DIPQ5VU43 2346 aa0.52□□□□□ -2.33
SSB-212ENST00000494051 REV3LO60673 3130 aa0.51□□□□□ -2.33
SSB-212ENST00000494051 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
SSB-212ENST00000494051 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
SSB-212ENST00000494051 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
SSB-212ENST00000494051 GPR98Q8WXG9 6306 aa0.5□□□□□ -2.33
SSB-212ENST00000494051 CELSR1Q9NYQ6 3014 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 F8P00451 2351 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 K7EIM0 57 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 SPRR2DP22532 72 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 TRANK1O15050 2925 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
SSB-212ENST00000494051 DSPP15924 2871 aaKnown RBP0.47□□□□□ -2.33
SSB-212ENST00000494051 CSMD3Q7Z407 3707 aa0.47□□□□□ -2.33
SSB-212ENST00000494051 IGF2RP11717 2491 aa0.47□□□□□ -2.33
SSB-212ENST00000494051 FRAS1Q86XX4 4008 aa0.47□□□□□ -2.33
SSB-212ENST00000494051 GVINP1Q7Z2Y8 2422 aa0.46□□□□□ -2.34
SSB-212ENST00000494051 VWFP04275 2813 aa0.46□□□□□ -2.34
SSB-212ENST00000494051 CSPG4Q6UVK1 2322 aa0.46□□□□□ -2.34
SSB-212ENST00000494051 TMEM167AQ8TBQ9 72 aa0.45□□□□□ -2.34
SSB-212ENST00000494051 EP300Q09472 2414 aaPredicted RBP0.45□□□□□ -2.34
SSB-212ENST00000494051 TNXBP22105 4242 aa0.45□□□□□ -2.34
SSB-212ENST00000494051 SPRR2BP35325 72 aa0.44□□□□□ -2.34
SSB-212ENST00000494051 RHPN1-AS1Q9BWJ2 59 aa0.44□□□□□ -2.34
SSB-212ENST00000494051 AKAP13Q12802 2813 aa0.44□□□□□ -2.34
SSB-212ENST00000494051 BDP1A6H8Y1 2624 aa0.43□□□□□ -2.34
SSB-212ENST00000494051 PRRC2CQ9Y520 2896 aaKnown RBP0.43□□□□□ -2.34
SSB-212ENST00000494051 PIEZO1Q92508 2521 aa0.42□□□□□ -2.34
SSB-212ENST00000494051 USP24Q9UPU5 2620 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms