RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 TENM4Q6N022 2769 aa9.31□□□□□ -0.92
PABPC4-216ENST00000492468 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
PABPC4-216ENST00000492468 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
PABPC4-216ENST00000492468 DEFB131BA0A096LNP1 70 aa9.29□□□□□ -0.92
PABPC4-216ENST00000492468 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
PABPC4-216ENST00000492468 FASNP49327 2511 aaKnown RBP9.28□□□□□ -0.92
PABPC4-216ENST00000492468 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
PABPC4-216ENST00000492468 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
PABPC4-216ENST00000492468 TRRAPQ9Y4A5 3859 aa9.27□□□□□ -0.92
PABPC4-216ENST00000492468 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.92
PABPC4-216ENST00000492468 F8P00451 2351 aa9.27□□□□□ -0.93
PABPC4-216ENST00000492468 CD164Q04900 197 aa9.27□□□□□ -0.93
PABPC4-216ENST00000492468 PRR15LQ9BU68 103 aa9.27□□□□□ -0.93
PABPC4-216ENST00000492468 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
PABPC4-216ENST00000492468 PRLHP81277 87 aa9.26□□□□□ -0.93
PABPC4-216ENST00000492468 TEP1Q99973 2627 aaKnown RBP9.26□□□□□ -0.93
PABPC4-216ENST00000492468 A8MWP4 228 aa9.25□□□□□ -0.93
PABPC4-216ENST00000492468 Q75L30 129 aa9.25□□□□□ -0.93
PABPC4-216ENST00000492468 ATRQ13535 2644 aa9.24□□□□□ -0.93
PABPC4-216ENST00000492468 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
PABPC4-216ENST00000492468 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
PABPC4-216ENST00000492468 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
PABPC4-216ENST00000492468 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.93
PABPC4-216ENST00000492468 COA5Q86WW8 74 aa9.21□□□□□ -0.93
PABPC4-216ENST00000492468 LCA10Q71F78 164 aa9.21□□□□□ -0.94
PABPC4-216ENST00000492468 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
PABPC4-216ENST00000492468 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
PABPC4-216ENST00000492468 SPRR1BP22528 89 aa9.19□□□□□ -0.94
PABPC4-216ENST00000492468 NSD1Q96L73 2696 aaPredicted RBP9.19□□□□□ -0.94
PABPC4-216ENST00000492468 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
PABPC4-216ENST00000492468 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
PABPC4-216ENST00000492468 INAFM1C9JVW0 142 aa9.18□□□□□ -0.94
PABPC4-216ENST00000492468 A0A096LNI7 61 aa9.17□□□□□ -0.94
PABPC4-216ENST00000492468 BAHCC1Q9P281 2608 aa9.17□□□□□ -0.94
PABPC4-216ENST00000492468 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
PABPC4-216ENST00000492468 A6NED7 52 aa9.15□□□□□ -0.94
PABPC4-216ENST00000492468 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
PABPC4-216ENST00000492468 A6NN06 94 aa9.14□□□□□ -0.95
PABPC4-216ENST00000492468 PLAC8Q9NZF1 115 aa9.13□□□□□ -0.95
PABPC4-216ENST00000492468 IGKV2-24A0A0C4DH68 120 aa9.12□□□□□ -0.95
PABPC4-216ENST00000492468 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
PABPC4-216ENST00000492468 ANK2Q01484 3957 aa9.12□□□□□ -0.95
PABPC4-216ENST00000492468 HECTD1Q9ULT8 2610 aa9.12□□□□□ -0.95
PABPC4-216ENST00000492468 H0Y9J4 135 aa9.12□□□□□ -0.95
PABPC4-216ENST00000492468 KRTAP11-1Q8IUC1 163 aa9.11□□□□□ -0.95
PABPC4-216ENST00000492468 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
PABPC4-216ENST00000492468 LINC01558Q9Y6Z2 57 aa9.11□□□□□ -0.95
PABPC4-216ENST00000492468 NDUFS5O43920 106 aa9.1□□□□□ -0.95
PABPC4-216ENST00000492468 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
PABPC4-216ENST00000492468 RBM12B-AS1Q9P1G2 102 aa9.1□□□□□ -0.95
PABPC4-216ENST00000492468 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
PABPC4-216ENST00000492468 PCOTHQ58A44 107 aa9.08□□□□□ -0.96
PABPC4-216ENST00000492468 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
PABPC4-216ENST00000492468 Q6ZR54 194 aa9.07□□□□□ -0.96
PABPC4-216ENST00000492468 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
PABPC4-216ENST00000492468 MOBPQ13875 183 aa9.05□□□□□ -0.96
PABPC4-216ENST00000492468 Q96NJ1 140 aa9.05□□□□□ -0.96
PABPC4-216ENST00000492468 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
PABPC4-216ENST00000492468 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
PABPC4-216ENST00000492468 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
PABPC4-216ENST00000492468 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
PABPC4-216ENST00000492468 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
PABPC4-216ENST00000492468 DNAH3Q8TD57 4116 aa9.01□□□□□ -0.97
PABPC4-216ENST00000492468 HRES1P13985 223 aa9□□□□□ -0.97
PABPC4-216ENST00000492468 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
PABPC4-216ENST00000492468 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
PABPC4-216ENST00000492468 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
PABPC4-216ENST00000492468 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
PABPC4-216ENST00000492468 SPINK7P58062 85 aa8.98□□□□□ -0.97
PABPC4-216ENST00000492468 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
PABPC4-216ENST00000492468 MAST4O15021 2626 aa8.96□□□□□ -0.97
PABPC4-216ENST00000492468 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
PABPC4-216ENST00000492468 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
PABPC4-216ENST00000492468 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
PABPC4-216ENST00000492468 LYSTQ99698 3801 aa8.91□□□□□ -0.98
PABPC4-216ENST00000492468 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
PABPC4-216ENST00000492468 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
PABPC4-216ENST00000492468 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
PABPC4-216ENST00000492468 DNAH9Q9NYC9 4486 aa8.88□□□□□ -0.99
PABPC4-216ENST00000492468 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
PABPC4-216ENST00000492468 NOTCH1P46531 2555 aa8.85□□□□□ -0.99
PABPC4-216ENST00000492468 PANO1I0J062 215 aa8.85□□□□□ -0.99
PABPC4-216ENST00000492468 A0A087X002 238 aa8.84□□□□□ -0.99
PABPC4-216ENST00000492468 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
PABPC4-216ENST00000492468 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
PABPC4-216ENST00000492468 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
PABPC4-216ENST00000492468 CDK2AP2O75956 126 aa8.83□□□□□ -1
PABPC4-216ENST00000492468 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
PABPC4-216ENST00000492468 ALMS1Q8TCU4 4167 aa8.83□□□□□ -1
PABPC4-216ENST00000492468 STAB1Q9NY15 2570 aa8.82□□□□□ -1
PABPC4-216ENST00000492468 MDFIQ99750 246 aa8.82□□□□□ -1
PABPC4-216ENST00000492468 NBEAL1Q6ZS30 2694 aa8.82□□□□□ -1
PABPC4-216ENST00000492468 K7EIL1 84 aa8.82□□□□□ -1
PABPC4-216ENST00000492468 CSMD3Q7Z407 3707 aa8.81□□□□□ -1
PABPC4-216ENST00000492468 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
PABPC4-216ENST00000492468 Q5W150 140 aa8.79□□□□□ -1
PABPC4-216ENST00000492468 KRTAP24-1Q3LI83 254 aa8.78□□□□□ -1
PABPC4-216ENST00000492468 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
PABPC4-216ENST00000492468 COL6A5A8TX70 2615 aa8.77□□□□□ -1
PABPC4-216ENST00000492468 LINC00313P59037 77 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms