RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
SEMA4D-220ENST00000492386 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
SEMA4D-220ENST00000492386 DNAH9Q9NYC9 4486 aa10.08□□□□□ -0.8
SEMA4D-220ENST00000492386 APLNQ9ULZ1 77 aa10.08□□□□□ -0.8
SEMA4D-220ENST00000492386 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
SEMA4D-220ENST00000492386 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
SEMA4D-220ENST00000492386 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-220ENST00000492386 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
SEMA4D-220ENST00000492386 A0A087WSZ3 146 aa10.04□□□□□ -0.8
SEMA4D-220ENST00000492386 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
SEMA4D-220ENST00000492386 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
SEMA4D-220ENST00000492386 UBE2AP49459 152 aa10.04□□□□□ -0.8
SEMA4D-220ENST00000492386 LINC00474Q9P2X8 69 aa10.03□□□□□ -0.8
SEMA4D-220ENST00000492386 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
SEMA4D-220ENST00000492386 SRRM2Q9UQ35 2752 aaKnown RBP10.02□□□□□ -0.8
SEMA4D-220ENST00000492386 H0Y9J4 135 aa10.02□□□□□ -0.8
SEMA4D-220ENST00000492386 SPRR1BP22528 89 aa10.01□□□□□ -0.81
SEMA4D-220ENST00000492386 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
SEMA4D-220ENST00000492386 TENM2Q9NT68 2774 aa10□□□□□ -0.81
SEMA4D-220ENST00000492386 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SEMA4D-220ENST00000492386 LRCOL1A6NCL2 159 aa9.99□□□□□ -0.81
SEMA4D-220ENST00000492386 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
SEMA4D-220ENST00000492386 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.81
SEMA4D-220ENST00000492386 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.81
SEMA4D-220ENST00000492386 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.82
SEMA4D-220ENST00000492386 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.82
SEMA4D-220ENST00000492386 PANO1I0J062 215 aa9.94□□□□□ -0.82
SEMA4D-220ENST00000492386 NBDYA0A0U1RRE5 68 aa9.94□□□□□ -0.82
SEMA4D-220ENST00000492386 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
SEMA4D-220ENST00000492386 Q6ZRN7 208 aaPredicted RBP9.93□□□□□ -0.82
SEMA4D-220ENST00000492386 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
SEMA4D-220ENST00000492386 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
SEMA4D-220ENST00000492386 B9D2Q9BPU9 175 aa9.92□□□□□ -0.82
SEMA4D-220ENST00000492386 LINC00472Q9H8W2 130 aa9.92□□□□□ -0.82
SEMA4D-220ENST00000492386 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
SEMA4D-220ENST00000492386 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
SEMA4D-220ENST00000492386 PRR15Q8IV56 129 aa9.9□□□□□ -0.82
SEMA4D-220ENST00000492386 A8MWP4 228 aa9.88□□□□□ -0.83
SEMA4D-220ENST00000492386 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
SEMA4D-220ENST00000492386 MDFIQ99750 246 aa9.88□□□□□ -0.83
SEMA4D-220ENST00000492386 CASC2Q6XLA1 102 aa9.87□□□□□ -0.83
SEMA4D-220ENST00000492386 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
SEMA4D-220ENST00000492386 C1orf64Q8NEQ6 169 aa9.86□□□□□ -0.83
SEMA4D-220ENST00000492386 MP68P56378 58 aa9.85□□□□□ -0.83
SEMA4D-220ENST00000492386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-220ENST00000492386 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
SEMA4D-220ENST00000492386 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
SEMA4D-220ENST00000492386 CYP4F30PQ9H0H9 118 aa9.84□□□□□ -0.83
SEMA4D-220ENST00000492386 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
SEMA4D-220ENST00000492386 NDUFB1O75438 58 aa9.83□□□□□ -0.84
SEMA4D-220ENST00000492386 LINC00208Q96KT6 92 aa9.82□□□□□ -0.84
SEMA4D-220ENST00000492386 PRO0628Q9UI54 55 aa9.82□□□□□ -0.84
SEMA4D-220ENST00000492386 PRR4Q16378 134 aa9.81□□□□□ -0.84
SEMA4D-220ENST00000492386 H0Y9P7 68 aa9.8□□□□□ -0.84
SEMA4D-220ENST00000492386 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
SEMA4D-220ENST00000492386 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
SEMA4D-220ENST00000492386 H3BPC8 53 aa9.77□□□□□ -0.85
SEMA4D-220ENST00000492386 Q96NJ1 140 aa9.77□□□□□ -0.85
SEMA4D-220ENST00000492386 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
SEMA4D-220ENST00000492386 A0A087WTM6 91 aa9.76□□□□□ -0.85
SEMA4D-220ENST00000492386 VPS13DQ5THJ4 4388 aa9.74□□□□□ -0.85
SEMA4D-220ENST00000492386 Q1T7F1 81 aa9.74□□□□□ -0.85
SEMA4D-220ENST00000492386 STARD9Q9P2P6 4700 aa9.72□□□□□ -0.85
SEMA4D-220ENST00000492386 SPANXA2-OT1Q8N9U9 137 aa9.72□□□□□ -0.85
SEMA4D-220ENST00000492386 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
SEMA4D-220ENST00000492386 MOBPQ13875 183 aa9.71□□□□□ -0.86
SEMA4D-220ENST00000492386 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.86
SEMA4D-220ENST00000492386 RTL8CO15255 209 aa9.7□□□□□ -0.86
SEMA4D-220ENST00000492386 WWC2-AS2Q96NR7 200 aa9.7□□□□□ -0.86
SEMA4D-220ENST00000492386 PSORS1C2Q9UIG4 136 aa9.7□□□□□ -0.86
SEMA4D-220ENST00000492386 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
SEMA4D-220ENST00000492386 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
SEMA4D-220ENST00000492386 ZNF706Q9Y5V0 76 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-220ENST00000492386 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
SEMA4D-220ENST00000492386 Q6ZR54 194 aa9.65□□□□□ -0.86
SEMA4D-220ENST00000492386 C8orf17Q9NRJ1 99 aa9.65□□□□□ -0.86
SEMA4D-220ENST00000492386 ANAPC11Q9NYG5 84 aa9.65□□□□□ -0.87
SEMA4D-220ENST00000492386 PRKDCP78527 4128 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-220ENST00000492386 ZNF861PO60384 105 aa9.64□□□□□ -0.87
SEMA4D-220ENST00000492386 FBN3Q75N90 2809 aa9.63□□□□□ -0.87
SEMA4D-220ENST00000492386 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
SEMA4D-220ENST00000492386 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
SEMA4D-220ENST00000492386 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
SEMA4D-220ENST00000492386 PSPHP1O15172 72 aa9.61□□□□□ -0.87
SEMA4D-220ENST00000492386 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
SEMA4D-220ENST00000492386 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
SEMA4D-220ENST00000492386 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
SEMA4D-220ENST00000492386 KMT2AQ03164 3969 aa9.58□□□□□ -0.88
SEMA4D-220ENST00000492386 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
SEMA4D-220ENST00000492386 V9GYY9 64 aa9.56□□□□□ -0.88
SEMA4D-220ENST00000492386 FRAS1Q86XX4 4008 aa9.56□□□□□ -0.88
SEMA4D-220ENST00000492386 A0A087X002 238 aa9.56□□□□□ -0.88
SEMA4D-220ENST00000492386 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
SEMA4D-220ENST00000492386 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
SEMA4D-220ENST00000492386 CD164Q04900 197 aa9.55□□□□□ -0.88
SEMA4D-220ENST00000492386 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
SEMA4D-220ENST00000492386 A8MUN3 132 aa9.54□□□□□ -0.88
SEMA4D-220ENST00000492386 MRPL34Q9BQ48 92 aaKnown RBP9.54□□□□□ -0.88
SEMA4D-220ENST00000492386 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
SEMA4D-220ENST00000492386 NDUFS5O43920 106 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms