RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 S100PP25815 95 aa6.39□□□□□ -1.39
EXOSC3-207ENST00000490516 Q6JHZ5 121 aa6.39□□□□□ -1.39
EXOSC3-207ENST00000490516 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
EXOSC3-207ENST00000490516 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
EXOSC3-207ENST00000490516 LITAFQ99732 161 aa6.35□□□□□ -1.39
EXOSC3-207ENST00000490516 SPRR2EP22531 72 aa6.34□□□□□ -1.39
EXOSC3-207ENST00000490516 SPRR2BP35325 72 aa6.34□□□□□ -1.39
EXOSC3-207ENST00000490516 SPRR2AP35326 72 aa6.34□□□□□ -1.39
EXOSC3-207ENST00000490516 HERVK_113P61574 105 aa6.34□□□□□ -1.39
EXOSC3-207ENST00000490516 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
EXOSC3-207ENST00000490516 PLNP26678 52 aa6.31□□□□□ -1.4
EXOSC3-207ENST00000490516 OCIAD2Q56VL3 154 aa6.31□□□□□ -1.4
EXOSC3-207ENST00000490516 PMCHL2Q9BQD1 86 aa6.31□□□□□ -1.4
EXOSC3-207ENST00000490516 TRAV13-2A0A0B4J235 113 aa6.3□□□□□ -1.4
EXOSC3-207ENST00000490516 MT1BP07438 61 aa6.3□□□□□ -1.4
EXOSC3-207ENST00000490516 SLC7A5P1Q8MH63 180 aa6.3□□□□□ -1.4
EXOSC3-207ENST00000490516 NHP2Q9NX24 153 aaKnown RBP6.3□□□□□ -1.4
EXOSC3-207ENST00000490516 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
EXOSC3-207ENST00000490516 CHCHD1Q96BP2 118 aaKnown RBP6.29□□□□□ -1.4
EXOSC3-207ENST00000490516 A4D1N5 150 aa6.28□□□□□ -1.4
EXOSC3-207ENST00000490516 SERF1AO75920 110 aa6.28□□□□□ -1.4
EXOSC3-207ENST00000490516 DPM2O94777 84 aa6.28□□□□□ -1.4
EXOSC3-207ENST00000490516 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
EXOSC3-207ENST00000490516 LINC00313P59037 77 aa6.27□□□□□ -1.41
EXOSC3-207ENST00000490516 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
EXOSC3-207ENST00000490516 SS18L2Q9UHA2 77 aa6.27□□□□□ -1.41
EXOSC3-207ENST00000490516 COLCA2A8K830 154 aa6.26□□□□□ -1.41
EXOSC3-207ENST00000490516 S100A1P23297 94 aa6.26□□□□□ -1.41
EXOSC3-207ENST00000490516 A6NDN8 102 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 H3BUT2 72 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 TIMM17BO60830 172 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 IGKCP01834 107 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 Q6ZQY7 126 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
EXOSC3-207ENST00000490516 E9PLD3 99 aa6.23□□□□□ -1.41
EXOSC3-207ENST00000490516 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
EXOSC3-207ENST00000490516 SPINK7P58062 85 aa6.22□□□□□ -1.41
EXOSC3-207ENST00000490516 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
EXOSC3-207ENST00000490516 HSBP1O75506 76 aa6.21□□□□□ -1.42
EXOSC3-207ENST00000490516 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
EXOSC3-207ENST00000490516 Q5VV11 94 aa6.21□□□□□ -1.42
EXOSC3-207ENST00000490516 SMIM11BQ8TCY0 68 aa6.21□□□□□ -1.42
EXOSC3-207ENST00000490516 A0A087WSZ3 146 aa6.19□□□□□ -1.42
EXOSC3-207ENST00000490516 TMEM218A2RU14 115 aa6.19□□□□□ -1.42
EXOSC3-207ENST00000490516 LEPROTL1O95214 131 aa6.19□□□□□ -1.42
EXOSC3-207ENST00000490516 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
EXOSC3-207ENST00000490516 hADV29S1A0JD25 119 aa6.17□□□□□ -1.42
EXOSC3-207ENST00000490516 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
EXOSC3-207ENST00000490516 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
EXOSC3-207ENST00000490516 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
EXOSC3-207ENST00000490516 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
EXOSC3-207ENST00000490516 TEN1Q86WV5 123 aa6.15□□□□□ -1.42
EXOSC3-207ENST00000490516 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.42
EXOSC3-207ENST00000490516 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.42
EXOSC3-207ENST00000490516 S100A6P06703 90 aa6.14□□□□□ -1.43
EXOSC3-207ENST00000490516 FABP4P15090 132 aa6.14□□□□□ -1.43
EXOSC3-207ENST00000490516 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
EXOSC3-207ENST00000490516 SPRR2DP22532 72 aa6.13□□□□□ -1.43
EXOSC3-207ENST00000490516 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
EXOSC3-207ENST00000490516 IGKV4-1P06312 121 aa6.12□□□□□ -1.43
EXOSC3-207ENST00000490516 VAMP3Q15836 100 aa6.12□□□□□ -1.43
EXOSC3-207ENST00000490516 ZCCHC13Q8WW36 166 aaKnown RBP6.12□□□□□ -1.43
EXOSC3-207ENST00000490516 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
EXOSC3-207ENST00000490516 LINC00310P59036 64 aa6.1□□□□□ -1.43
EXOSC3-207ENST00000490516 UQCC3Q6UW78 93 aa6.1□□□□□ -1.43
EXOSC3-207ENST00000490516 TMA7Q9Y2S6 64 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-207ENST00000490516 H3BS24 57 aa6.09□□□□□ -1.43
EXOSC3-207ENST00000490516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-207ENST00000490516 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
EXOSC3-207ENST00000490516 MUSTN1Q8IVN3 82 aa6.08□□□□□ -1.44
EXOSC3-207ENST00000490516 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
EXOSC3-207ENST00000490516 IFITM1P13164 125 aa6.06□□□□□ -1.44
EXOSC3-207ENST00000490516 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
EXOSC3-207ENST00000490516 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
EXOSC3-207ENST00000490516 COPS9Q8WXC6 57 aa6.06□□□□□ -1.44
EXOSC3-207ENST00000490516 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
EXOSC3-207ENST00000490516 CLLU1Q5K131 121 aa6.04□□□□□ -1.44
EXOSC3-207ENST00000490516 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
EXOSC3-207ENST00000490516 FAM236AA0A1B0GUQ0 79 aa6.02□□□□□ -1.45
EXOSC3-207ENST00000490516 FAM236BA0A1B0GV22 79 aa6.02□□□□□ -1.45
EXOSC3-207ENST00000490516 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
EXOSC3-207ENST00000490516 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
EXOSC3-207ENST00000490516 NDUFV3P56181 108 aaKnown RBP5.99□□□□□ -1.45
EXOSC3-207ENST00000490516 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
EXOSC3-207ENST00000490516 YPEL4Q96NS1 127 aa5.98□□□□□ -1.45
EXOSC3-207ENST00000490516 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
EXOSC3-207ENST00000490516 SYS1-DBNDD2H3BUS1 97 aa5.96□□□□□ -1.46
EXOSC3-207ENST00000490516 C3orf79P0CE67 100 aa5.96□□□□□ -1.46
EXOSC3-207ENST00000490516 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
EXOSC3-207ENST00000490516 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
EXOSC3-207ENST00000490516 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
EXOSC3-207ENST00000490516 H3BMG7 143 aa5.94□□□□□ -1.46
EXOSC3-207ENST00000490516 C12orf57Q99622 126 aa5.94□□□□□ -1.46
EXOSC3-207ENST00000490516 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
EXOSC3-207ENST00000490516 TRGC2P03986 189 aa5.93□□□□□ -1.46
EXOSC3-207ENST00000490516 LINC01545Q5VT33 79 aa5.93□□□□□ -1.46
EXOSC3-207ENST00000490516 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
EXOSC3-207ENST00000490516 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
EXOSC3-207ENST00000490516 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
EXOSC3-207ENST00000490516 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms