RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 SPANXDQ9BXN6 97 aa7.24□□□□□ -1.25
VARS-227ENST00000489979 LITAFQ99732 161 aa7.23□□□□□ -1.25
VARS-227ENST00000489979 TCL1BO95988 128 aa7.22□□□□□ -1.25
VARS-227ENST00000489979 Q6ZVH6 145 aa7.22□□□□□ -1.25
VARS-227ENST00000489979 TTTY13Q9BZ97 58 aa7.22□□□□□ -1.25
VARS-227ENST00000489979 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
VARS-227ENST00000489979 IFITM1P13164 125 aa7.2□□□□□ -1.26
VARS-227ENST00000489979 ATP11AUNQ6ZP68 121 aa7.2□□□□□ -1.26
VARS-227ENST00000489979 LINC00518Q8N0U6 118 aa7.2□□□□□ -1.26
VARS-227ENST00000489979 LOC105371267A0A1B0GV96 52 aa7.19□□□□□ -1.26
VARS-227ENST00000489979 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
VARS-227ENST00000489979 PYY3Q5JQD4 70 aa7.18□□□□□ -1.26
VARS-227ENST00000489979 Q75L30 129 aa7.18□□□□□ -1.26
VARS-227ENST00000489979 VAMP8Q9BV40 100 aa7.18□□□□□ -1.26
VARS-227ENST00000489979 TRBV7-6A0A0J9YX20 115 aa7.17□□□□□ -1.26
VARS-227ENST00000489979 A0A1B0GWB2 263 aa7.16□□□□□ -1.26
VARS-227ENST00000489979 OBSCN-AS1Q96MR7 158 aa7.16□□□□□ -1.26
VARS-227ENST00000489979 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
VARS-227ENST00000489979 COX8AP10176 69 aa7.14□□□□□ -1.27
VARS-227ENST00000489979 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
VARS-227ENST00000489979 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
VARS-227ENST00000489979 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
VARS-227ENST00000489979 DLEU1O43261 78 aa7.12□□□□□ -1.27
VARS-227ENST00000489979 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
VARS-227ENST00000489979 TRAV13-2A0A0B4J235 113 aa7.11□□□□□ -1.27
VARS-227ENST00000489979 A6NDN8 102 aa7.11□□□□□ -1.27
VARS-227ENST00000489979 MT2AP02795 61 aa7.11□□□□□ -1.27
VARS-227ENST00000489979 LCE2BO14633 110 aa7.1□□□□□ -1.27
VARS-227ENST00000489979 F8WEM9 126 aa7.09□□□□□ -1.27
VARS-227ENST00000489979 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
VARS-227ENST00000489979 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
VARS-227ENST00000489979 A4D1N5 150 aa7.08□□□□□ -1.28
VARS-227ENST00000489979 Q96NJ1 140 aa7.08□□□□□ -1.28
VARS-227ENST00000489979 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
VARS-227ENST00000489979 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
VARS-227ENST00000489979 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
VARS-227ENST00000489979 MT1FP04733 61 aa7.06□□□□□ -1.28
VARS-227ENST00000489979 HIGD1BQ9P298 99 aa7.06□□□□□ -1.28
VARS-227ENST00000489979 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
VARS-227ENST00000489979 SMIM6P0DI80 62 aa7.05□□□□□ -1.28
VARS-227ENST00000489979 Q6JHZ5 121 aa7.05□□□□□ -1.28
VARS-227ENST00000489979 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
VARS-227ENST00000489979 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
VARS-227ENST00000489979 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
VARS-227ENST00000489979 A6NJY4 79 aa7.04□□□□□ -1.28
VARS-227ENST00000489979 VAMP3Q15836 100 aa7.04□□□□□ -1.28
VARS-227ENST00000489979 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
VARS-227ENST00000489979 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
VARS-227ENST00000489979 C12orf57Q99622 126 aa7.03□□□□□ -1.28
VARS-227ENST00000489979 RAB37Q96AX2 223 aa7.02□□□□□ -1.29
VARS-227ENST00000489979 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
VARS-227ENST00000489979 A8MUU9 505 aa7.01□□□□□ -1.29
VARS-227ENST00000489979 LST1O00453 97 aa7.01□□□□□ -1.29
VARS-227ENST00000489979 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
VARS-227ENST00000489979 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
VARS-227ENST00000489979 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 Q6ZQY7 126 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 CEND1Q8N111 149 aa6.99□□□□□ -1.29
VARS-227ENST00000489979 SNCGO76070 127 aa6.98□□□□□ -1.29
VARS-227ENST00000489979 LINC00575Q6W349 94 aa6.98□□□□□ -1.29
VARS-227ENST00000489979 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
VARS-227ENST00000489979 HSD52Q0P140 79 aa6.97□□□□□ -1.29
VARS-227ENST00000489979 BVES-AS1Q5T3Y7 98 aa6.97□□□□□ -1.29
VARS-227ENST00000489979 hADV29S1A0JD25 119 aa6.96□□□□□ -1.3
VARS-227ENST00000489979 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
VARS-227ENST00000489979 H3BUT2 72 aa6.93□□□□□ -1.3
VARS-227ENST00000489979 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
VARS-227ENST00000489979 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
VARS-227ENST00000489979 KRTAP19-6Q3LI70 58 aa6.91□□□□□ -1.3
VARS-227ENST00000489979 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
VARS-227ENST00000489979 H0YGX0 51 aa6.9□□□□□ -1.3
VARS-227ENST00000489979 FXYD2P54710 66 aa6.9□□□□□ -1.3
VARS-227ENST00000489979 DSCR10P59022 87 aa6.9□□□□□ -1.3
VARS-227ENST00000489979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.9□□□□□ -1.3
VARS-227ENST00000489979 SNHG12Q9BXW3 62 aa6.9□□□□□ -1.3
VARS-227ENST00000489979 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.3
VARS-227ENST00000489979 GHRHP01286 108 aa6.89□□□□□ -1.31
VARS-227ENST00000489979 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
VARS-227ENST00000489979 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
VARS-227ENST00000489979 COX6CP09669 75 aa6.88□□□□□ -1.31
VARS-227ENST00000489979 HRES1P13985 223 aa6.88□□□□□ -1.31
VARS-227ENST00000489979 PSMB2P49721 201 aa6.88□□□□□ -1.31
VARS-227ENST00000489979 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
VARS-227ENST00000489979 M0R143 59 aa6.87□□□□□ -1.31
VARS-227ENST00000489979 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
VARS-227ENST00000489979 A0A087WSZ3 146 aa6.84□□□□□ -1.31
VARS-227ENST00000489979 A0A1B0GX51 115 aa6.84□□□□□ -1.31
VARS-227ENST00000489979 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
VARS-227ENST00000489979 K7ERJ3 54 aa6.83□□□□□ -1.32
VARS-227ENST00000489979 DNAL4O96015 105 aa6.83□□□□□ -1.32
VARS-227ENST00000489979 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
VARS-227ENST00000489979 TRIAP1O43715 76 aa6.82□□□□□ -1.32
VARS-227ENST00000489979 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
VARS-227ENST00000489979 LINC00313P59037 77 aa6.81□□□□□ -1.32
VARS-227ENST00000489979 BATFQ16520 125 aa6.81□□□□□ -1.32
VARS-227ENST00000489979 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
VARS-227ENST00000489979 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms