RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ARL11Q969Q4 196 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 PIK3C2BO00750 1634 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 UBR3Q6ZT12 1888 aa-1.37□□□□□ -2.63
CCDC93-209ENST00000488908 CUL7Q14999 1698 aa-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 EEA1Q15075 1411 aa-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 TMEM218A2RU14 115 aa-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 C7orf77A4D0Y5 90 aa-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 C8orf59Q8N0T1 100 aaPredicted RBP-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 ANP32BQ92688 251 aaKnown RBP-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 PARP4Q9UKK3 1724 aaKnown RBP-1.38□□□□□ -2.63
CCDC93-209ENST00000488908 A0A1B0GUL6 1792 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 RGPD3A6NKT7 1758 aaPredicted RBP-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 RGPD4Q7Z3J3 1758 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 ARPC4P59998 168 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 CCDC58Q4VC31 144 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 Q56UQ5 140 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 C12orf57Q99622 126 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 NCOA2Q15596 1464 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 UTRNP46939 3433 aa-1.39□□□□□ -2.63
CCDC93-209ENST00000488908 LRRC7Q96NW7 1537 aa-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 KIF20BQ96Q89 1820 aa-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 COX6CP09669 75 aa-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 ACBD7Q8N6N7 88 aa-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 WIZO95785 1651 aa-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 SUPT6HQ7KZ85 1726 aaKnown RBP-1.4□□□□□ -2.63
CCDC93-209ENST00000488908 ADGRL2O95490 1459 aa-1.41□□□□□ -2.63
CCDC93-209ENST00000488908 S100A8P05109 93 aa-1.41□□□□□ -2.64
CCDC93-209ENST00000488908 EHBP1L1Q8N3D4 1523 aa-1.41□□□□□ -2.64
CCDC93-209ENST00000488908 PLCH1Q4KWH8 1693 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 XIRP2A4UGR9 3374 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 THOC2Q8NI27 1593 aaKnown RBP-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 MRC2Q9UBG0 1479 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 CEP152O94986 1710 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 MIF4GDA9UHW6 222 aaKnown RBP-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 APOC2P02655 101 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 DR1Q01658 176 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 GAFA1Q96PS6 74 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 MANBALQ9NQG1 85 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 PAIP2BQ9ULR5 123 aaKnown RBP-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 FAM135AQ9P2D6 1515 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 KIF1AQ12756 1690 aa-1.42□□□□□ -2.64
CCDC93-209ENST00000488908 NUP188Q5SRE5 1749 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 KIF21BO75037 1637 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 ANKRD36BQ8N2N9 1353 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 CRYM-AS1A6NIL9 109 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 F6UZH7 168 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 IGLC2P0DOY2 106 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 IGLC3P0DOY3 106 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 FCER1GP30273 86 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 HSD52Q0P140 79 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 MEIG1Q5JSS6 88 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 MINOS1Q5TGZ0 78 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 C1orf54Q8WWF1 131 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 LINC00474Q9P2X8 69 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 SCAPERQ9BY12 1400 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 SAMD9Q5K651 1589 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 PHLPP1O60346 1717 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 CD163L1Q9NR16 1453 aa-1.43□□□□□ -2.64
CCDC93-209ENST00000488908 CROCC2H7BZ55 1655 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 TRAV21A0A0B4J279 112 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 NAP1L6A6NFF2 107 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 MRPL33O75394 65 aaKnown RBP-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 SFTA3P0C7M3 94 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 RPS27P42677 84 aaKnown RBP-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 CATR1Q13166 79 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 RPS27LQ71UM5 84 aaKnown RBP-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 ABRACLQ9P1F3 81 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 PRO1854Q9UHT4 67 aa-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 TARBP1Q13395 1621 aaKnown RBP-1.44□□□□□ -2.64
CCDC93-209ENST00000488908 KIAA0586Q9BVV6 1533 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 CCNB3Q8WWL7 1395 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 QSER1Q2KHR3 1735 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 UBR1Q8IWV7 1749 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 IQCF6A8MYZ5 107 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 FAM25AB3EWG3 89 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 FAM25CB3EWG5 89 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 FAM25GB3EWG6 89 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 TMEM262E9PQX1 116 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 HMGA1P17096 107 aaKnown RBP-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 CD52P31358 61 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 SELENOWP63302 87 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 ALKAL2Q6UX46 152 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 FAM107BQ9H098 131 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 ZFYVE16Q7Z3T8 1539 aa-1.45□□□□□ -2.64
CCDC93-209ENST00000488908 EIF4G3O43432 1585 aaKnown RBP-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 NAIPQ13075 1403 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 GNG11P61952 73 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 KRTAP19-2Q3LHN2 52 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 MUSTN1Q8IVN3 82 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 C20orf78Q9BR46 151 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 DPH3P1Q9H4G8 78 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 C6orf48Q9UBA6 75 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 MED14O60244 1454 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 TOPAZ1Q8N9V7 1692 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 ROBO1Q9Y6N7 1651 aa-1.46□□□□□ -2.64
CCDC93-209ENST00000488908 NESP48681 1621 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 UACAQ9BZF9 1416 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 C5P01031 1676 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 SCN7AQ01118 1682 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 D6R8Y8 96 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms