RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 K7EQZ3 153 aa7.98□□□□□ -1.13
CLIC4-202ENST00000488683 PANO1I0J062 215 aa7.97□□□□□ -1.13
CLIC4-202ENST00000488683 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.13
CLIC4-202ENST00000488683 C16orf90A8MZG2 172 aa7.96□□□□□ -1.14
CLIC4-202ENST00000488683 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
CLIC4-202ENST00000488683 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
CLIC4-202ENST00000488683 MDFIQ99750 246 aa7.95□□□□□ -1.14
CLIC4-202ENST00000488683 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
CLIC4-202ENST00000488683 DSCR10P59022 87 aa7.95□□□□□ -1.14
CLIC4-202ENST00000488683 CNBPP62633 177 aaKnown RBP7.94□□□□□ -1.14
CLIC4-202ENST00000488683 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
CLIC4-202ENST00000488683 APLNQ9ULZ1 77 aa7.94□□□□□ -1.14
CLIC4-202ENST00000488683 HECTD4Q9Y4D8 3996 aa7.93□□□□□ -1.14
CLIC4-202ENST00000488683 A0A087WSZ3 146 aa7.92□□□□□ -1.14
CLIC4-202ENST00000488683 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
CLIC4-202ENST00000488683 A0A1B0GW54 56 aa7.91□□□□□ -1.14
CLIC4-202ENST00000488683 WFDC13Q8IUB5 93 aa7.91□□□□□ -1.14
CLIC4-202ENST00000488683 DNAH2Q9P225 4427 aa7.9□□□□□ -1.14
CLIC4-202ENST00000488683 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
CLIC4-202ENST00000488683 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.15
CLIC4-202ENST00000488683 MEGF8Q7Z7M0 2845 aa7.9□□□□□ -1.15
CLIC4-202ENST00000488683 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
CLIC4-202ENST00000488683 PRR4Q16378 134 aa7.89□□□□□ -1.15
CLIC4-202ENST00000488683 FBN3Q75N90 2809 aa7.89□□□□□ -1.15
CLIC4-202ENST00000488683 LRCOL1A6NCL2 159 aa7.88□□□□□ -1.15
CLIC4-202ENST00000488683 UBE2AP49459 152 aa7.88□□□□□ -1.15
CLIC4-202ENST00000488683 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
CLIC4-202ENST00000488683 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
CLIC4-202ENST00000488683 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
CLIC4-202ENST00000488683 VPS13DQ5THJ4 4388 aa7.85□□□□□ -1.15
CLIC4-202ENST00000488683 NDUFC1O43677 76 aa7.84□□□□□ -1.15
CLIC4-202ENST00000488683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
CLIC4-202ENST00000488683 LINC00336Q6ZUF6 198 aa7.83□□□□□ -1.16
CLIC4-202ENST00000488683 C9orf163Q8N9P6 203 aa7.83□□□□□ -1.16
CLIC4-202ENST00000488683 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
CLIC4-202ENST00000488683 MPLKIPQ8TAP9 179 aa7.83□□□□□ -1.16
CLIC4-202ENST00000488683 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
CLIC4-202ENST00000488683 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
CLIC4-202ENST00000488683 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
CLIC4-202ENST00000488683 C14orf177Q52M58 125 aa7.82□□□□□ -1.16
CLIC4-202ENST00000488683 Q6ZRN7 208 aaPredicted RBP7.82□□□□□ -1.16
CLIC4-202ENST00000488683 B9D2Q9BPU9 175 aa7.82□□□□□ -1.16
CLIC4-202ENST00000488683 DNAH17Q9UFH2 4485 aa7.82□□□□□ -1.16
CLIC4-202ENST00000488683 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
CLIC4-202ENST00000488683 IGLV9-49A0A0B4J1Y8 123 aa7.81□□□□□ -1.16
CLIC4-202ENST00000488683 HCG22E2RYF7 251 aa7.8□□□□□ -1.16
CLIC4-202ENST00000488683 LCE6AA0A183 80 aa7.8□□□□□ -1.16
CLIC4-202ENST00000488683 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
CLIC4-202ENST00000488683 H0Y9J4 135 aa7.77□□□□□ -1.17
CLIC4-202ENST00000488683 SPRR1BP22528 89 aa7.77□□□□□ -1.17
CLIC4-202ENST00000488683 ATP5EP56381 51 aaPredicted RBP7.75□□□□□ -1.17
CLIC4-202ENST00000488683 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
CLIC4-202ENST00000488683 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
CLIC4-202ENST00000488683 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
CLIC4-202ENST00000488683 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
CLIC4-202ENST00000488683 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
CLIC4-202ENST00000488683 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.18
CLIC4-202ENST00000488683 HYDINQ4G0P3 5121 aa7.71□□□□□ -1.18
CLIC4-202ENST00000488683 KRTAP29-1A8MX34 341 aaPredicted RBP7.71□□□□□ -1.18
CLIC4-202ENST00000488683 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
CLIC4-202ENST00000488683 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
CLIC4-202ENST00000488683 C1orf64Q8NEQ6 169 aa7.69□□□□□ -1.18
CLIC4-202ENST00000488683 BRK1Q8WUW1 75 aa7.69□□□□□ -1.18
CLIC4-202ENST00000488683 A0A087WTM6 91 aa7.68□□□□□ -1.18
CLIC4-202ENST00000488683 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
CLIC4-202ENST00000488683 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
CLIC4-202ENST00000488683 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
CLIC4-202ENST00000488683 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
CLIC4-202ENST00000488683 PKIGQ9Y2B9 76 aa7.67□□□□□ -1.18
CLIC4-202ENST00000488683 A8MWP4 228 aa7.66□□□□□ -1.18
CLIC4-202ENST00000488683 RTL8CO15255 209 aa7.66□□□□□ -1.18
CLIC4-202ENST00000488683 MOBPQ13875 183 aa7.66□□□□□ -1.18
CLIC4-202ENST00000488683 DNAH5Q8TE73 4624 aa7.65□□□□□ -1.18
CLIC4-202ENST00000488683 H0Y9P7 68 aa7.64□□□□□ -1.19
CLIC4-202ENST00000488683 hDV103S1A0JD37 113 aa7.63□□□□□ -1.19
CLIC4-202ENST00000488683 Q96NJ1 140 aa7.63□□□□□ -1.19
CLIC4-202ENST00000488683 A0A087X002 238 aa7.62□□□□□ -1.19
CLIC4-202ENST00000488683 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
CLIC4-202ENST00000488683 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
CLIC4-202ENST00000488683 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
CLIC4-202ENST00000488683 PSPHP1O15172 72 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 MP68P56378 58 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 LINC00483Q53H64 154 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 Q6ZR54 194 aa7.6□□□□□ -1.19
CLIC4-202ENST00000488683 IGLV5-52A0A0A0MRZ9 124 aa7.59□□□□□ -1.19
CLIC4-202ENST00000488683 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
CLIC4-202ENST00000488683 LY6G6CO95867 125 aa7.58□□□□□ -1.2
CLIC4-202ENST00000488683 NDUFS5O43920 106 aa7.58□□□□□ -1.2
CLIC4-202ENST00000488683 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
CLIC4-202ENST00000488683 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
CLIC4-202ENST00000488683 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
CLIC4-202ENST00000488683 FAT2Q9NYQ8 4349 aa7.55□□□□□ -1.2
CLIC4-202ENST00000488683 ZNF861PO60384 105 aa7.54□□□□□ -1.2
CLIC4-202ENST00000488683 NDUFB1O75438 58 aa7.54□□□□□ -1.2
CLIC4-202ENST00000488683 CIRBP-AS1Q8TBR5 109 aa7.54□□□□□ -1.2
CLIC4-202ENST00000488683 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
CLIC4-202ENST00000488683 A8MU10 97 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms