RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 DEFB131AP59861 70 aa1.39□□□□□ -2.19
R3HDM1-216ENST00000483065 NOP10Q9NPE3 64 aaKnown RBP1.39□□□□□ -2.19
R3HDM1-216ENST00000483065 ZNF462Q96JM2 2506 aa1.39□□□□□ -2.19
R3HDM1-216ENST00000483065 MUC6Q6W4X9 2439 aa1.39□□□□□ -2.19
R3HDM1-216ENST00000483065 CACNA1HO95180 2353 aa1.39□□□□□ -2.19
R3HDM1-216ENST00000483065 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
R3HDM1-216ENST00000483065 S4R3F8 94 aa1.38□□□□□ -2.19
R3HDM1-216ENST00000483065 WNK2Q9Y3S1 2297 aa1.38□□□□□ -2.19
R3HDM1-216ENST00000483065 PRLHP81277 87 aa1.36□□□□□ -2.19
R3HDM1-216ENST00000483065 DEFB106AQ8N104 65 aa1.36□□□□□ -2.19
R3HDM1-216ENST00000483065 KAAG1Q9UBP8 84 aa1.36□□□□□ -2.19
R3HDM1-216ENST00000483065 U3KQA8 63 aa1.34□□□□□ -2.19
R3HDM1-216ENST00000483065 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
R3HDM1-216ENST00000483065 POLQO75417 2590 aa1.33□□□□□ -2.2
R3HDM1-216ENST00000483065 DEFB135Q30KP9 77 aa1.32□□□□□ -2.2
R3HDM1-216ENST00000483065 SMR3AQ99954 134 aa1.32□□□□□ -2.2
R3HDM1-216ENST00000483065 CLTCL1P53675 1640 aa1.32□□□□□ -2.2
R3HDM1-216ENST00000483065 ZNF292O60281 2723 aa1.31□□□□□ -2.2
R3HDM1-216ENST00000483065 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
R3HDM1-216ENST00000483065 GCC2Q8IWJ2 1684 aa1.31□□□□□ -2.2
R3HDM1-216ENST00000483065 CHD9Q3L8U1 2897 aa1.3□□□□□ -2.2
R3HDM1-216ENST00000483065 M0R2T5 61 aa1.3□□□□□ -2.2
R3HDM1-216ENST00000483065 SPTBN1Q01082 2364 aaKnown RBP1.29□□□□□ -2.2
R3HDM1-216ENST00000483065 ABCA12Q86UK0 2595 aa1.28□□□□□ -2.2
R3HDM1-216ENST00000483065 DUOX1Q9NRD9 1551 aa1.28□□□□□ -2.2
R3HDM1-216ENST00000483065 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
R3HDM1-216ENST00000483065 TENM4Q6N022 2769 aa1.25□□□□□ -2.21
R3HDM1-216ENST00000483065 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
R3HDM1-216ENST00000483065 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
R3HDM1-216ENST00000483065 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
R3HDM1-216ENST00000483065 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
R3HDM1-216ENST00000483065 A8MTW9 85 aa1.22□□□□□ -2.21
R3HDM1-216ENST00000483065 M0QY20 66 aa1.21□□□□□ -2.22
R3HDM1-216ENST00000483065 ALMS1Q8TCU4 4167 aa1.21□□□□□ -2.22
R3HDM1-216ENST00000483065 BDP1A6H8Y1 2624 aa1.2□□□□□ -2.22
R3HDM1-216ENST00000483065 TRANK1O15050 2925 aa1.2□□□□□ -2.22
R3HDM1-216ENST00000483065 REV3LO60673 3130 aa1.19□□□□□ -2.22
R3HDM1-216ENST00000483065 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
R3HDM1-216ENST00000483065 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
R3HDM1-216ENST00000483065 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
R3HDM1-216ENST00000483065 ABCA2Q9BZC7 2435 aa1.18□□□□□ -2.22
R3HDM1-216ENST00000483065 TPRP12270 2363 aaKnown RBP1.18□□□□□ -2.22
R3HDM1-216ENST00000483065 GVINP1Q7Z2Y8 2422 aa1.17□□□□□ -2.22
R3HDM1-216ENST00000483065 C9orf92A6NGG3 77 aa1.17□□□□□ -2.22
R3HDM1-216ENST00000483065 PIEZO1Q92508 2521 aa1.17□□□□□ -2.22
R3HDM1-216ENST00000483065 F8P00451 2351 aa1.16□□□□□ -2.22
R3HDM1-216ENST00000483065 AKAP6Q13023 2319 aa1.14□□□□□ -2.23
R3HDM1-216ENST00000483065 DSPP15924 2871 aaKnown RBP1.13□□□□□ -2.23
R3HDM1-216ENST00000483065 POLR2KP53803 58 aaKnown RBP1.13□□□□□ -2.23
R3HDM1-216ENST00000483065 PDE4DIPQ5VU43 2346 aa1.13□□□□□ -2.23
R3HDM1-216ENST00000483065 KNL1Q8NG31 2342 aa1.12□□□□□ -2.23
R3HDM1-216ENST00000483065 M0QZ58 72 aa1.12□□□□□ -2.23
R3HDM1-216ENST00000483065 PCNX1Q96RV3 2341 aa1.1□□□□□ -2.23
R3HDM1-216ENST00000483065 VWFP04275 2813 aa1.1□□□□□ -2.23
R3HDM1-216ENST00000483065 APCP25054 2843 aa1.08□□□□□ -2.24
R3HDM1-216ENST00000483065 Q9Y3F1 56 aa1.08□□□□□ -2.24
R3HDM1-216ENST00000483065 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
R3HDM1-216ENST00000483065 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
R3HDM1-216ENST00000483065 RPL39P62891 51 aaKnown RBP1.05□□□□□ -2.24
R3HDM1-216ENST00000483065 ATRQ13535 2644 aa1.05□□□□□ -2.24
R3HDM1-216ENST00000483065 AKAP13Q12802 2813 aa1.04□□□□□ -2.24
R3HDM1-216ENST00000483065 PRM1P04553 51 aa1.04□□□□□ -2.24
R3HDM1-216ENST00000483065 TNP1P09430 55 aa1.04□□□□□ -2.24
R3HDM1-216ENST00000483065 CD52P31358 61 aa1.04□□□□□ -2.24
R3HDM1-216ENST00000483065 CHD6Q8TD26 2715 aa1.03□□□□□ -2.24
R3HDM1-216ENST00000483065 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
R3HDM1-216ENST00000483065 IGF2RP11717 2491 aa1.03□□□□□ -2.25
R3HDM1-216ENST00000483065 OTOGQ6ZRI0 2925 aa1.02□□□□□ -2.25
R3HDM1-216ENST00000483065 CLPSL2Q6UWE3 100 aa1.02□□□□□ -2.25
R3HDM1-216ENST00000483065 FBN2P35556 2912 aa1.02□□□□□ -2.25
R3HDM1-216ENST00000483065 SPTA1P02549 2419 aa1.01□□□□□ -2.25
R3HDM1-216ENST00000483065 EP300Q09472 2414 aaPredicted RBP1.01□□□□□ -2.25
R3HDM1-216ENST00000483065 H3BNG1 76 aa1.01□□□□□ -2.25
R3HDM1-216ENST00000483065 CSPG4Q6UVK1 2322 aa1□□□□□ -2.25
R3HDM1-216ENST00000483065 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
R3HDM1-216ENST00000483065 HECTD1Q9ULT8 2610 aa1□□□□□ -2.25
R3HDM1-216ENST00000483065 PTPN13Q12923 2485 aa0.99□□□□□ -2.25
R3HDM1-216ENST00000483065 ZNF469Q96JG9 3925 aaPredicted RBP0.99□□□□□ -2.25
R3HDM1-216ENST00000483065 ANK2Q01484 3957 aa0.99□□□□□ -2.25
R3HDM1-216ENST00000483065 TENM1Q9UKZ4 2725 aa0.98□□□□□ -2.25
R3HDM1-216ENST00000483065 COX14Q96I36 57 aa0.98□□□□□ -2.25
R3HDM1-216ENST00000483065 NOTCH1P46531 2555 aa0.98□□□□□ -2.25
R3HDM1-216ENST00000483065 STATHP02808 62 aa0.97□□□□□ -2.25
R3HDM1-216ENST00000483065 RPL39LQ96EH5 51 aaKnown RBP0.97□□□□□ -2.25
R3HDM1-216ENST00000483065 UNC79Q9P2D8 2635 aa0.97□□□□□ -2.25
R3HDM1-216ENST00000483065 FBN3Q75N90 2809 aa0.96□□□□□ -2.26
R3HDM1-216ENST00000483065 SPRR2DP22532 72 aa0.96□□□□□ -2.26
R3HDM1-216ENST00000483065 TOMM7Q9P0U1 55 aa0.96□□□□□ -2.26
R3HDM1-216ENST00000483065 LINC01590Q5TEZ4 76 aa0.95□□□□□ -2.26
R3HDM1-216ENST00000483065 TNXBP22105 4242 aa0.95□□□□□ -2.26
R3HDM1-216ENST00000483065 CREBBPQ92793 2442 aa0.95□□□□□ -2.26
R3HDM1-216ENST00000483065 DEFB133Q30KQ1 61 aa0.94□□□□□ -2.26
R3HDM1-216ENST00000483065 CHD8Q9HCK8 2581 aa0.94□□□□□ -2.26
R3HDM1-216ENST00000483065 H3BSH0 61 aa0.93□□□□□ -2.26
R3HDM1-216ENST00000483065 DEFB110Q30KQ9 67 aa0.93□□□□□ -2.26
R3HDM1-216ENST00000483065 ARHGAP5-AS1Q96IT6 56 aa0.93□□□□□ -2.26
R3HDM1-216ENST00000483065 TTTY10Q9BZA0 68 aa0.93□□□□□ -2.26
R3HDM1-216ENST00000483065 PKD1L2Q7Z442 2459 aa0.93□□□□□ -2.26
R3HDM1-216ENST00000483065 CEP290O15078 2479 aa0.92□□□□□ -2.26
R3HDM1-216ENST00000483065 SPRR2BP35325 72 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms