RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
VPS41-212ENST00000482217 RPS27LQ71UM5 84 aaKnown RBP1.6□□□□□ -2.15
VPS41-212ENST00000482217 APLNQ9ULZ1 77 aa1.6□□□□□ -2.15
VPS41-212ENST00000482217 C5orf42Q9H799 3197 aa1.6□□□□□ -2.15
VPS41-212ENST00000482217 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
VPS41-212ENST00000482217 PRUNE2Q8WUY3 3088 aa1.59□□□□□ -2.15
VPS41-212ENST00000482217 DEFB130BP0DP73 79 aa1.59□□□□□ -2.15
VPS41-212ENST00000482217 DEFB130AP0DP74 79 aa1.59□□□□□ -2.15
VPS41-212ENST00000482217 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
VPS41-212ENST00000482217 ROS1P08922 2347 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 VCANP13611 3396 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 ZNF462Q96JM2 2506 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 PKDREJQ9NTG1 2253 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 KRTAP13-1Q8IUC0 172 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 MUC3AQ02505 3323 aa1.58□□□□□ -2.16
VPS41-212ENST00000482217 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
VPS41-212ENST00000482217 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
VPS41-212ENST00000482217 COL6A3P12111 3177 aa1.57□□□□□ -2.16
VPS41-212ENST00000482217 COX14Q96I36 57 aa1.57□□□□□ -2.16
VPS41-212ENST00000482217 MYO15AQ9UKN7 3530 aa1.57□□□□□ -2.16
VPS41-212ENST00000482217 DNAH14Q0VDD8 3507 aa1.56□□□□□ -2.16
VPS41-212ENST00000482217 DMDP11532 3685 aa1.56□□□□□ -2.16
VPS41-212ENST00000482217 WNK2Q9Y3S1 2297 aa1.55□□□□□ -2.16
VPS41-212ENST00000482217 CEP290O15078 2479 aa1.55□□□□□ -2.16
VPS41-212ENST00000482217 WFDC10BQ8IUB3 73 aa1.55□□□□□ -2.16
VPS41-212ENST00000482217 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
VPS41-212ENST00000482217 SPRR1BP22528 89 aa1.54□□□□□ -2.16
VPS41-212ENST00000482217 KLK9Q2XQG4 91 aa1.54□□□□□ -2.16
VPS41-212ENST00000482217 DEFB105AQ8NG35 78 aa1.54□□□□□ -2.16
VPS41-212ENST00000482217 ARHGAP5-AS1Q96IT6 56 aa1.54□□□□□ -2.16
VPS41-212ENST00000482217 PCNX1Q96RV3 2341 aa1.54□□□□□ -2.16
VPS41-212ENST00000482217 RP1L1Q8IWN7 2480 aaPredicted RBP1.54□□□□□ -2.16
VPS41-212ENST00000482217 DEFB133Q30KQ1 61 aa1.53□□□□□ -2.16
VPS41-212ENST00000482217 TTTY10Q9BZA0 68 aa1.53□□□□□ -2.16
VPS41-212ENST00000482217 WDFY3Q8IZQ1 3526 aa1.53□□□□□ -2.17
VPS41-212ENST00000482217 TRIOO75962 3097 aa1.53□□□□□ -2.17
VPS41-212ENST00000482217 ZNF292O60281 2723 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 A0A0D9SG42 100 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 STATHP02808 62 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 DEFB110Q30KQ9 67 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 KAAG1Q9UBP8 84 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 TPRP12270 2363 aaKnown RBP1.52□□□□□ -2.17
VPS41-212ENST00000482217 SPTBN1Q01082 2364 aaKnown RBP1.52□□□□□ -2.17
VPS41-212ENST00000482217 SPEGQ15772 3267 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 WDFY4Q6ZS81 3184 aa1.52□□□□□ -2.17
VPS41-212ENST00000482217 H0YGG7 62 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 RPL39P62891 51 aaKnown RBP1.51□□□□□ -2.17
VPS41-212ENST00000482217 SPINK9Q5DT21 86 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 Q5VSD8 79 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 U3KQA8 63 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 SPTBN2O15020 2390 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 CACNA1HO95180 2353 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 CELSR2Q9HCU4 2923 aa1.51□□□□□ -2.17
VPS41-212ENST00000482217 LAMA1P25391 3075 aa1.5□□□□□ -2.17
VPS41-212ENST00000482217 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
VPS41-212ENST00000482217 VPS13AQ96RL7 3174 aa1.5□□□□□ -2.17
VPS41-212ENST00000482217 GVINP1Q7Z2Y8 2422 aa1.49□□□□□ -2.17
VPS41-212ENST00000482217 DEFB124Q8NES8 71 aa1.49□□□□□ -2.17
VPS41-212ENST00000482217 MUC6Q6W4X9 2439 aa1.49□□□□□ -2.17
VPS41-212ENST00000482217 ASPMQ8IZT6 3477 aa1.49□□□□□ -2.17
VPS41-212ENST00000482217 FRYLO94915 3013 aa1.48□□□□□ -2.17
VPS41-212ENST00000482217 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
VPS41-212ENST00000482217 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
VPS41-212ENST00000482217 RPL39LQ96EH5 51 aaKnown RBP1.48□□□□□ -2.17
VPS41-212ENST00000482217 SPENQ96T58 3664 aaKnown RBP1.48□□□□□ -2.17
VPS41-212ENST00000482217 CSPG4Q6UVK1 2322 aa1.48□□□□□ -2.17
VPS41-212ENST00000482217 BDP1A6H8Y1 2624 aa1.47□□□□□ -2.17
VPS41-212ENST00000482217 MEGF8Q7Z7M0 2845 aa1.47□□□□□ -2.17
VPS41-212ENST00000482217 WT1-ASQ06250 92 aa1.47□□□□□ -2.17
VPS41-212ENST00000482217 FREM2Q5SZK8 3169 aa1.47□□□□□ -2.17
VPS41-212ENST00000482217 ZFHX4Q86UP3 3567 aa1.47□□□□□ -2.17
VPS41-212ENST00000482217 IGLV5-48A0A075B6I7 105 aa1.46□□□□□ -2.18
VPS41-212ENST00000482217 CFAP54Q96N23 3096 aa1.46□□□□□ -2.18
VPS41-212ENST00000482217 ABCA12Q86UK0 2595 aa1.46□□□□□ -2.18
VPS41-212ENST00000482217 DMXL1Q9Y485 3027 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 CELSR3Q9NYQ7 3312 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 DCHS1Q96JQ0 3298 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 MMP24-AS1A0A0U1RRL7 71 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 LAMA5O15230 3695 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 BSNQ9UPA5 3926 aa1.45□□□□□ -2.18
VPS41-212ENST00000482217 TTC28Q96AY4 2481 aa1.44□□□□□ -2.18
VPS41-212ENST00000482217 H3BSH0 61 aa1.44□□□□□ -2.18
VPS41-212ENST00000482217 DEFB109BQ30KR1 87 aa1.44□□□□□ -2.18
VPS41-212ENST00000482217 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
VPS41-212ENST00000482217 CFAP47Q6ZTR5 3102 aa1.44□□□□□ -2.18
VPS41-212ENST00000482217 NCOR1O75376 2440 aa1.43□□□□□ -2.18
VPS41-212ENST00000482217 LEAP2Q969E1 77 aa1.43□□□□□ -2.18
VPS41-212ENST00000482217 F8P00451 2351 aa1.43□□□□□ -2.18
VPS41-212ENST00000482217 LOC400499M0QZD8 3231 aa1.43□□□□□ -2.18
VPS41-212ENST00000482217 POLQO75417 2590 aa1.42□□□□□ -2.18
VPS41-212ENST00000482217 J3QKU1 62 aa1.42□□□□□ -2.18
VPS41-212ENST00000482217 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
VPS41-212ENST00000482217 LINC01590Q5TEZ4 76 aa1.42□□□□□ -2.18
VPS41-212ENST00000482217 S4R3F8 94 aa1.42□□□□□ -2.18
VPS41-212ENST00000482217 FRYQ5TBA9 3013 aa1.41□□□□□ -2.18
VPS41-212ENST00000482217 CELSR1Q9NYQ6 3014 aa1.41□□□□□ -2.18
VPS41-212ENST00000482217 PRLHP81277 87 aa1.41□□□□□ -2.18
VPS41-212ENST00000482217 AKAP13Q12802 2813 aa1.41□□□□□ -2.18
VPS41-212ENST00000482217 ABCA2Q9BZC7 2435 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms