RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PMCHL2Q9BQD1 86 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 SPANXDQ9BXN6 97 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 KRTAP16-1A8MUX0 517 aa3.5□□□□□ -1.85
LRCH3-216ENST00000481048 OR13C6PQ8NH95 151 aa3.5□□□□□ -1.85
LRCH3-216ENST00000481048 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
LRCH3-216ENST00000481048 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
LRCH3-216ENST00000481048 IGLV8-61A0A075B6I0 122 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 AKR1D1P51857 326 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 ELOF1P60002 83 aaKnown RBP3.49□□□□□ -1.85
LRCH3-216ENST00000481048 NPC2P61916 151 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 TAL2Q16559 108 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 PRO1933Q9H354 126 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
LRCH3-216ENST00000481048 SYS1-DBNDD2H3BUS1 97 aa3.48□□□□□ -1.85
LRCH3-216ENST00000481048 H7C2G1 150 aa3.48□□□□□ -1.85
LRCH3-216ENST00000481048 COX7BP24311 80 aa3.48□□□□□ -1.85
LRCH3-216ENST00000481048 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
LRCH3-216ENST00000481048 HRCT1Q6UXD1 115 aa3.48□□□□□ -1.85
LRCH3-216ENST00000481048 A0A1B0GWB2 263 aa3.47□□□□□ -1.85
LRCH3-216ENST00000481048 MT1HP80294 61 aa3.47□□□□□ -1.85
LRCH3-216ENST00000481048 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
LRCH3-216ENST00000481048 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
LRCH3-216ENST00000481048 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
LRCH3-216ENST00000481048 A4D1N5 150 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 COLCA2A8K830 154 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 IFITM1P13164 125 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 Q6ZVH6 145 aa3.46□□□□□ -1.86
LRCH3-216ENST00000481048 IGLV5-48A0A075B6I7 105 aa3.45□□□□□ -1.86
LRCH3-216ENST00000481048 Q1RN00 199 aa3.45□□□□□ -1.86
LRCH3-216ENST00000481048 C1orf195Q5TG92 126 aa3.45□□□□□ -1.86
LRCH3-216ENST00000481048 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
LRCH3-216ENST00000481048 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
LRCH3-216ENST00000481048 TCL1BO95988 128 aa3.44□□□□□ -1.86
LRCH3-216ENST00000481048 TRAV13-2A0A0B4J235 113 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BKO60814 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BJP06899 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BOP23527 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BBP33778 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BDP58876 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 RPL37P61927 97 aaKnown RBP3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BCP62807 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST2H2BEQ16778 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-216ENST00000481048 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BHQ93079 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BNQ99877 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 HIST1H2BMQ99879 126 aa3.43□□□□□ -1.86
LRCH3-216ENST00000481048 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
LRCH3-216ENST00000481048 A6NDN8 102 aa3.42□□□□□ -1.86
LRCH3-216ENST00000481048 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
LRCH3-216ENST00000481048 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
LRCH3-216ENST00000481048 M0R2T5 61 aa3.41□□□□□ -1.86
LRCH3-216ENST00000481048 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
LRCH3-216ENST00000481048 VAMP3Q15836 100 aa3.41□□□□□ -1.86
LRCH3-216ENST00000481048 COA6Q5JTJ3 125 aaKnown RBP3.41□□□□□ -1.86
LRCH3-216ENST00000481048 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
LRCH3-216ENST00000481048 TTTY13Q9BZ97 58 aa3.41□□□□□ -1.86
LRCH3-216ENST00000481048 C20orf202A1L168 122 aa3.4□□□□□ -1.87
LRCH3-216ENST00000481048 F8WEM9 126 aa3.4□□□□□ -1.87
LRCH3-216ENST00000481048 SNRPEP62304 92 aaKnown RBP3.4□□□□□ -1.87
LRCH3-216ENST00000481048 Q6JHZ5 121 aa3.4□□□□□ -1.87
LRCH3-216ENST00000481048 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
LRCH3-216ENST00000481048 SLC7A5P1Q8MH63 180 aa3.4□□□□□ -1.87
LRCH3-216ENST00000481048 SMIM11BQ8TCY0 68 aa3.39□□□□□ -1.87
LRCH3-216ENST00000481048 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-216ENST00000481048 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
LRCH3-216ENST00000481048 KRTDAPP60985 99 aa3.38□□□□□ -1.87
LRCH3-216ENST00000481048 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
LRCH3-216ENST00000481048 PPDPFLQ8WWR9 84 aa3.38□□□□□ -1.87
LRCH3-216ENST00000481048 TRBV7-7A0A0K0K1E9 115 aa3.37□□□□□ -1.87
LRCH3-216ENST00000481048 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
LRCH3-216ENST00000481048 LINC00575Q6W349 94 aa3.37□□□□□ -1.87
LRCH3-216ENST00000481048 Q75L30 129 aa3.37□□□□□ -1.87
LRCH3-216ENST00000481048 CLEC2BQ92478 149 aa3.37□□□□□ -1.87
LRCH3-216ENST00000481048 LOC105371267A0A1B0GV96 52 aa3.36□□□□□ -1.87
LRCH3-216ENST00000481048 SCGB1D1O95968 90 aa3.36□□□□□ -1.87
LRCH3-216ENST00000481048 OCIAD2Q56VL3 154 aa3.36□□□□□ -1.87
LRCH3-216ENST00000481048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.36□□□□□ -1.87
LRCH3-216ENST00000481048 Q6ZQY7 126 aa3.36□□□□□ -1.87
LRCH3-216ENST00000481048 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
LRCH3-216ENST00000481048 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
LRCH3-216ENST00000481048 IGFL1Q6UW32 110 aa3.35□□□□□ -1.87
LRCH3-216ENST00000481048 LST1O00453 97 aa3.34□□□□□ -1.87
LRCH3-216ENST00000481048 ATOH7Q8N100 152 aa3.34□□□□□ -1.87
LRCH3-216ENST00000481048 SNHG12Q9BXW3 62 aa3.34□□□□□ -1.87
LRCH3-216ENST00000481048 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
LRCH3-216ENST00000481048 SNCGO76070 127 aa3.33□□□□□ -1.88
LRCH3-216ENST00000481048 Q6Q795 121 aa3.33□□□□□ -1.88
LRCH3-216ENST00000481048 OBSCN-AS1Q96MR7 158 aa3.33□□□□□ -1.88
LRCH3-216ENST00000481048 SS18L2Q9UHA2 77 aa3.33□□□□□ -1.88
LRCH3-216ENST00000481048 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
LRCH3-216ENST00000481048 TRBV20-1A0A075B6N2 111 aa3.31□□□□□ -1.88
LRCH3-216ENST00000481048 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms