RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
DDX56-210ENST00000479440 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
DDX56-210ENST00000479440 LST1O00453 97 aa8.07□□□□□ -1.12
DDX56-210ENST00000479440 TRGC2P03986 189 aa8.07□□□□□ -1.12
DDX56-210ENST00000479440 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
DDX56-210ENST00000479440 A8MUU9 505 aa8.06□□□□□ -1.12
DDX56-210ENST00000479440 IFITM1P13164 125 aa8.04□□□□□ -1.12
DDX56-210ENST00000479440 SCGB1D4Q6XE38 83 aa8.04□□□□□ -1.12
DDX56-210ENST00000479440 TTTY13Q9BZ97 58 aa8.04□□□□□ -1.12
DDX56-210ENST00000479440 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
DDX56-210ENST00000479440 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
DDX56-210ENST00000479440 SMIM11BQ8TCY0 68 aa8.02□□□□□ -1.13
DDX56-210ENST00000479440 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
DDX56-210ENST00000479440 Q6ZQY7 126 aa8.01□□□□□ -1.13
DDX56-210ENST00000479440 VAMP3Q15836 100 aa8□□□□□ -1.13
DDX56-210ENST00000479440 OCIAD2Q56VL3 154 aa8□□□□□ -1.13
DDX56-210ENST00000479440 Q6ZVH6 145 aa8□□□□□ -1.13
DDX56-210ENST00000479440 SS18L2Q9UHA2 77 aa8□□□□□ -1.13
DDX56-210ENST00000479440 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
DDX56-210ENST00000479440 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
DDX56-210ENST00000479440 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
DDX56-210ENST00000479440 hADV29S1A0JD25 119 aa7.97□□□□□ -1.13
DDX56-210ENST00000479440 MUSTN1Q8IVN3 82 aa7.96□□□□□ -1.14
DDX56-210ENST00000479440 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
DDX56-210ENST00000479440 PET117Q6UWS5 81 aa7.95□□□□□ -1.14
DDX56-210ENST00000479440 PPDPFLQ8WWR9 84 aa7.94□□□□□ -1.14
DDX56-210ENST00000479440 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
DDX56-210ENST00000479440 HRES1P13985 223 aa7.91□□□□□ -1.14
DDX56-210ENST00000479440 DSCR10P59022 87 aa7.91□□□□□ -1.14
DDX56-210ENST00000479440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.91□□□□□ -1.14
DDX56-210ENST00000479440 H3BUT2 72 aa7.9□□□□□ -1.14
DDX56-210ENST00000479440 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
DDX56-210ENST00000479440 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
DDX56-210ENST00000479440 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
DDX56-210ENST00000479440 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
DDX56-210ENST00000479440 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
DDX56-210ENST00000479440 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
DDX56-210ENST00000479440 A0A087WSZ3 146 aa7.85□□□□□ -1.15
DDX56-210ENST00000479440 NEBP20929 6669 aa7.84□□□□□ -1.15
DDX56-210ENST00000479440 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
DDX56-210ENST00000479440 LINC00313P59037 77 aa7.83□□□□□ -1.16
DDX56-210ENST00000479440 BVES-AS1Q5T3Y7 98 aa7.82□□□□□ -1.16
DDX56-210ENST00000479440 KRTDAPP60985 99 aa7.81□□□□□ -1.16
DDX56-210ENST00000479440 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
DDX56-210ENST00000479440 A8MWP4 228 aa7.8□□□□□ -1.16
DDX56-210ENST00000479440 COLCA2A8K830 154 aa7.79□□□□□ -1.16
DDX56-210ENST00000479440 C12orf57Q99622 126 aa7.79□□□□□ -1.16
DDX56-210ENST00000479440 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
DDX56-210ENST00000479440 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
DDX56-210ENST00000479440 SNCGO76070 127 aa7.73□□□□□ -1.17
DDX56-210ENST00000479440 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
DDX56-210ENST00000479440 NDUFV3P56181 108 aaKnown RBP7.73□□□□□ -1.17
DDX56-210ENST00000479440 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
DDX56-210ENST00000479440 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
DDX56-210ENST00000479440 H3BMG7 143 aa7.69□□□□□ -1.18
DDX56-210ENST00000479440 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
DDX56-210ENST00000479440 GHRHP01286 108 aa7.67□□□□□ -1.18
DDX56-210ENST00000479440 KRTAP20-1Q3LI63 56 aa7.66□□□□□ -1.18
DDX56-210ENST00000479440 IGHV6-1A0A0B4J1U7 121 aa7.65□□□□□ -1.18
DDX56-210ENST00000479440 A0A1W2PNM2 257 aa7.65□□□□□ -1.18
DDX56-210ENST00000479440 SPINK7P58062 85 aa7.64□□□□□ -1.19
DDX56-210ENST00000479440 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
DDX56-210ENST00000479440 TRBV7-4A0A0J9YYF1 115 aa7.62□□□□□ -1.19
DDX56-210ENST00000479440 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
DDX56-210ENST00000479440 H0YGX0 51 aa7.62□□□□□ -1.19
DDX56-210ENST00000479440 FABP2P12104 132 aa7.62□□□□□ -1.19
DDX56-210ENST00000479440 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
DDX56-210ENST00000479440 DEFB116Q30KQ4 102 aa7.6□□□□□ -1.19
DDX56-210ENST00000479440 FAM218AQ96MZ4 157 aa7.6□□□□□ -1.19
DDX56-210ENST00000479440 HSBP1L1C9JCN9 74 aa7.59□□□□□ -1.19
DDX56-210ENST00000479440 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
DDX56-210ENST00000479440 HIST1H4GQ99525 98 aa7.59□□□□□ -1.19
DDX56-210ENST00000479440 RAB37Q96AX2 223 aa7.58□□□□□ -1.2
DDX56-210ENST00000479440 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
DDX56-210ENST00000479440 A0A1B0GX51 115 aa7.57□□□□□ -1.2
DDX56-210ENST00000479440 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
DDX56-210ENST00000479440 A0A1B0GVX0 72 aa7.55□□□□□ -1.2
DDX56-210ENST00000479440 TRACP01848 142 aa7.53□□□□□ -1.2
DDX56-210ENST00000479440 A6NN06 94 aa7.51□□□□□ -1.21
DDX56-210ENST00000479440 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
DDX56-210ENST00000479440 A0A1B0GV72 72 aa7.5□□□□□ -1.21
DDX56-210ENST00000479440 CCKP06307 115 aa7.49□□□□□ -1.21
DDX56-210ENST00000479440 H3BQ85 93 aa7.46□□□□□ -1.22
DDX56-210ENST00000479440 DNAL4O96015 105 aa7.46□□□□□ -1.22
DDX56-210ENST00000479440 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.22
DDX56-210ENST00000479440 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
DDX56-210ENST00000479440 ORMDL1Q9P0S3 153 aa7.45□□□□□ -1.22
DDX56-210ENST00000479440 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
DDX56-210ENST00000479440 J3KT08 172 aa7.43□□□□□ -1.22
DDX56-210ENST00000479440 COX8AP10176 69 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms