RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SNAPINO95295 136 aa10.06□□□□□ -0.8
PDLIM1-202ENST00000477757 APOC3P02656 99 aa10.06□□□□□ -0.8
PDLIM1-202ENST00000477757 A6NDN8 102 aa10.03□□□□□ -0.8
PDLIM1-202ENST00000477757 SVBPQ8N300 66 aa10.03□□□□□ -0.8
PDLIM1-202ENST00000477757 LST1O00453 97 aa10.02□□□□□ -0.81
PDLIM1-202ENST00000477757 NEBP20929 6669 aa10.02□□□□□ -0.81
PDLIM1-202ENST00000477757 TTTY13Q9BZ97 58 aa10.01□□□□□ -0.81
PDLIM1-202ENST00000477757 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
PDLIM1-202ENST00000477757 TRGC2P03986 189 aa9.99□□□□□ -0.81
PDLIM1-202ENST00000477757 MPLKIPQ8TAP9 179 aa9.99□□□□□ -0.81
PDLIM1-202ENST00000477757 NDUFA5Q16718 116 aa9.98□□□□□ -0.81
PDLIM1-202ENST00000477757 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
PDLIM1-202ENST00000477757 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
PDLIM1-202ENST00000477757 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.82
PDLIM1-202ENST00000477757 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
PDLIM1-202ENST00000477757 RBM12B-AS1Q9P1G2 102 aa9.96□□□□□ -0.82
PDLIM1-202ENST00000477757 Q6ZQY7 126 aa9.95□□□□□ -0.82
PDLIM1-202ENST00000477757 A6NJY4 79 aa9.94□□□□□ -0.82
PDLIM1-202ENST00000477757 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
PDLIM1-202ENST00000477757 IFITM1P13164 125 aa9.94□□□□□ -0.82
PDLIM1-202ENST00000477757 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
PDLIM1-202ENST00000477757 HRES1P13985 223 aa9.93□□□□□ -0.82
PDLIM1-202ENST00000477757 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
PDLIM1-202ENST00000477757 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
PDLIM1-202ENST00000477757 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
PDLIM1-202ENST00000477757 SS18L2Q9UHA2 77 aa9.91□□□□□ -0.82
PDLIM1-202ENST00000477757 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-202ENST00000477757 Q6ZVH6 145 aa9.89□□□□□ -0.83
PDLIM1-202ENST00000477757 VAMP3Q15836 100 aa9.88□□□□□ -0.83
PDLIM1-202ENST00000477757 hADV29S1A0JD25 119 aa9.87□□□□□ -0.83
PDLIM1-202ENST00000477757 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
PDLIM1-202ENST00000477757 DSCR10P59022 87 aa9.86□□□□□ -0.83
PDLIM1-202ENST00000477757 H3BUT2 72 aa9.84□□□□□ -0.83
PDLIM1-202ENST00000477757 SCGB1D1O95968 90 aa9.83□□□□□ -0.84
PDLIM1-202ENST00000477757 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
PDLIM1-202ENST00000477757 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
PDLIM1-202ENST00000477757 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
PDLIM1-202ENST00000477757 NOTCH2NLQ7Z3S9 236 aa9.81□□□□□ -0.84
PDLIM1-202ENST00000477757 MUC12Q9UKN1 5478 aa9.79□□□□□ -0.84
PDLIM1-202ENST00000477757 ANKRD39Q53RE8 183 aa9.79□□□□□ -0.84
PDLIM1-202ENST00000477757 SNHG12Q9BXW3 62 aa9.79□□□□□ -0.84
PDLIM1-202ENST00000477757 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
PDLIM1-202ENST00000477757 A0A087WSZ3 146 aa9.75□□□□□ -0.85
PDLIM1-202ENST00000477757 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
PDLIM1-202ENST00000477757 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
PDLIM1-202ENST00000477757 A8MWP4 228 aa9.72□□□□□ -0.85
PDLIM1-202ENST00000477757 LINC00313P59037 77 aa9.72□□□□□ -0.85
PDLIM1-202ENST00000477757 COLCA2A8K830 154 aa9.71□□□□□ -0.86
PDLIM1-202ENST00000477757 C3orf79P0CE67 100 aa9.71□□□□□ -0.86
PDLIM1-202ENST00000477757 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
PDLIM1-202ENST00000477757 KRTAP20-1Q3LI63 56 aa9.69□□□□□ -0.86
PDLIM1-202ENST00000477757 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
PDLIM1-202ENST00000477757 KRTDAPP60985 99 aa9.62□□□□□ -0.87
PDLIM1-202ENST00000477757 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
PDLIM1-202ENST00000477757 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
PDLIM1-202ENST00000477757 ATOH7Q8N100 152 aa9.6□□□□□ -0.87
PDLIM1-202ENST00000477757 C12orf57Q99622 126 aa9.6□□□□□ -0.87
PDLIM1-202ENST00000477757 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
PDLIM1-202ENST00000477757 SPINK7P58062 85 aa9.54□□□□□ -0.88
PDLIM1-202ENST00000477757 H3BMG7 143 aa9.53□□□□□ -0.88
PDLIM1-202ENST00000477757 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
PDLIM1-202ENST00000477757 ZCCHC13Q8WW36 166 aaKnown RBP9.5□□□□□ -0.89
PDLIM1-202ENST00000477757 SNCGO76070 127 aa9.48□□□□□ -0.89
PDLIM1-202ENST00000477757 MDN1Q9NU22 5596 aa9.48□□□□□ -0.89
PDLIM1-202ENST00000477757 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-202ENST00000477757 WFDC13Q8IUB5 93 aa9.47□□□□□ -0.89
PDLIM1-202ENST00000477757 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.9
PDLIM1-202ENST00000477757 LINC00472Q9H8W2 130 aa9.46□□□□□ -0.9
PDLIM1-202ENST00000477757 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
PDLIM1-202ENST00000477757 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
PDLIM1-202ENST00000477757 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
PDLIM1-202ENST00000477757 KMT2DO14686 5537 aa9.42□□□□□ -0.9
PDLIM1-202ENST00000477757 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
PDLIM1-202ENST00000477757 A6NN06 94 aa9.41□□□□□ -0.9
PDLIM1-202ENST00000477757 H0YGX0 51 aa9.41□□□□□ -0.9
PDLIM1-202ENST00000477757 FABP2P12104 132 aa9.41□□□□□ -0.9
PDLIM1-202ENST00000477757 RAB37Q96AX2 223 aa9.41□□□□□ -0.9
PDLIM1-202ENST00000477757 GHRHP01286 108 aa9.4□□□□□ -0.9
PDLIM1-202ENST00000477757 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
PDLIM1-202ENST00000477757 KRTAP5-9P26371 169 aa9.38□□□□□ -0.91
PDLIM1-202ENST00000477757 ANKRD29Q8N6D5 301 aa9.37□□□□□ -0.91
PDLIM1-202ENST00000477757 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
PDLIM1-202ENST00000477757 A0A1B0GX51 115 aa9.34□□□□□ -0.91
PDLIM1-202ENST00000477757 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
PDLIM1-202ENST00000477757 TRACP01848 142 aa9.3□□□□□ -0.92
PDLIM1-202ENST00000477757 A0A1B0GV72 72 aa9.29□□□□□ -0.92
PDLIM1-202ENST00000477757 CCKP06307 115 aa9.29□□□□□ -0.92
PDLIM1-202ENST00000477757 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
PDLIM1-202ENST00000477757 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms