RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 CRIPTQ9P021 101 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 PDE4DIPQ5VU43 2346 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 BDP1A6H8Y1 2624 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 URB1O60287 2271 aaKnown RBP0.95□□□□□ -2.26
TTC3-213ENST00000469939 POLQO75417 2590 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 M0QY20 66 aa0.94□□□□□ -2.26
TTC3-213ENST00000469939 DEFB123Q8N688 67 aa0.94□□□□□ -2.26
TTC3-213ENST00000469939 TMEM167AQ8TBQ9 72 aa0.94□□□□□ -2.26
TTC3-213ENST00000469939 MRPL34Q9BQ48 92 aaKnown RBP0.94□□□□□ -2.26
TTC3-213ENST00000469939 USF3Q68DE3 2245 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 TRANK1O15050 2925 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 SPTBN2O15020 2390 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 C2CD3Q4AC94 2353 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 PTPRQQ9UMZ3 2332 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
TTC3-213ENST00000469939 MAST4O15021 2626 aa0.92□□□□□ -2.26
TTC3-213ENST00000469939 H0YAA0 97 aa0.92□□□□□ -2.26
TTC3-213ENST00000469939 K7EIM0 57 aa0.92□□□□□ -2.26
TTC3-213ENST00000469939 SETXQ7Z333 2677 aaKnown RBP0.92□□□□□ -2.26
TTC3-213ENST00000469939 PTPN13Q12923 2485 aa0.92□□□□□ -2.26
TTC3-213ENST00000469939 USP9XQ93008 2570 aaPredicted RBP0.91□□□□□ -2.26
TTC3-213ENST00000469939 MMP24-AS1A0A0U1RRL7 71 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 WT1-ASQ06250 92 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 KLK9Q2XQG4 91 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 DEFB109BQ30KR1 87 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 PRO0255Q9UI72 69 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 ABCA12Q86UK0 2595 aa0.91□□□□□ -2.26
TTC3-213ENST00000469939 PCNTO95613 3336 aa0.9□□□□□ -2.26
TTC3-213ENST00000469939 ZFHX4Q86UP3 3567 aa0.9□□□□□ -2.26
TTC3-213ENST00000469939 CNOT1A5YKK6 2376 aaKnown RBP0.9□□□□□ -2.27
TTC3-213ENST00000469939 H3BUA1 57 aa0.9□□□□□ -2.27
TTC3-213ENST00000469939 WFDC10BQ8IUB3 73 aa0.9□□□□□ -2.27
TTC3-213ENST00000469939 TEP1Q99973 2627 aaKnown RBP0.9□□□□□ -2.27
TTC3-213ENST00000469939 NAV2Q8IVL1 2488 aa0.9□□□□□ -2.27
TTC3-213ENST00000469939 CACNA1EQ15878 2313 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 DOPEY2Q9Y3R5 2298 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 H1FX-AS1Q4G0G2 97 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 LEAP2Q969E1 77 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 FASNP49327 2511 aaKnown RBP0.89□□□□□ -2.27
TTC3-213ENST00000469939 PIEZO1Q92508 2521 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 UBR4Q5T4S7 5183 aa0.89□□□□□ -2.27
TTC3-213ENST00000469939 RPL39P5Q59GN2 51 aa0.88□□□□□ -2.27
TTC3-213ENST00000469939 KAAG1Q9UBP8 84 aa0.88□□□□□ -2.27
TTC3-213ENST00000469939 A0A0C4DFX4 3053 aa0.87□□□□□ -2.27
TTC3-213ENST00000469939 TOMM7Q9P0U1 55 aa0.87□□□□□ -2.27
TTC3-213ENST00000469939 KNL1Q8NG31 2342 aa0.87□□□□□ -2.27
TTC3-213ENST00000469939 DOPEY1Q5JWR5 2465 aa0.87□□□□□ -2.27
TTC3-213ENST00000469939 FLNBO75369 2602 aaKnown RBP0.86□□□□□ -2.27
TTC3-213ENST00000469939 ABCA2Q9BZC7 2435 aa0.86□□□□□ -2.27
TTC3-213ENST00000469939 MYO18BQ8IUG5 2567 aa0.86□□□□□ -2.27
TTC3-213ENST00000469939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.86□□□□□ -2.279e-6■■□□□ 12.6
TTC3-213ENST00000469939 Q5VSD8 79 aa0.86□□□□□ -2.27
TTC3-213ENST00000469939 CLPSL2Q6UWE3 100 aa0.86□□□□□ -2.27
TTC3-213ENST00000469939 TPRP12270 2363 aaKnown RBP0.86□□□□□ -2.27
TTC3-213ENST00000469939 ALMS1Q8TCU4 4167 aa0.86□□□□□ -2.27
TTC3-213ENST00000469939 APCP25054 2843 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 TNRC18O15417 2968 aaPredicted RBP0.85□□□□□ -2.27
TTC3-213ENST00000469939 A8MTW9 85 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 DEFB130BP0DP73 79 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 DEFB130AP0DP74 79 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 SPRR1AP35321 89 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
TTC3-213ENST00000469939 PCLOQ9Y6V0 5065 aa0.84□□□□□ -2.27
TTC3-213ENST00000469939 SZT2Q5T011 3432 aa0.84□□□□□ -2.27
TTC3-213ENST00000469939 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.27
TTC3-213ENST00000469939 DEFB108AA8MXU0 73 aa0.84□□□□□ -2.27
TTC3-213ENST00000469939 SPRR1BP22528 89 aa0.84□□□□□ -2.27
TTC3-213ENST00000469939 COX14Q96I36 57 aa0.84□□□□□ -2.27
TTC3-213ENST00000469939 NOP10Q9NPE3 64 aaKnown RBP0.84□□□□□ -2.27
TTC3-213ENST00000469939 ANK2Q01484 3957 aa0.83□□□□□ -2.28
TTC3-213ENST00000469939 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
TTC3-213ENST00000469939 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
TTC3-213ENST00000469939 COL6A3P12111 3177 aa0.83□□□□□ -2.28
TTC3-213ENST00000469939 HECTD1Q9ULT8 2610 aa0.83□□□□□ -2.28
TTC3-213ENST00000469939 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 CHD6Q8TD26 2715 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 KIAA1109Q2LD37 5005 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 H3BUX3 64 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 DEFB105AQ8NG35 78 aa0.82□□□□□ -2.28
TTC3-213ENST00000469939 SPTBN5Q9NRC6 3674 aaKnown RBP0.82□□□□□ -2.28
TTC3-213ENST00000469939 LAMA2P24043 3122 aaKnown RBP0.81□□□□□ -2.28
TTC3-213ENST00000469939 DNHD1Q96M86 4753 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 UTRNP46939 3433 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 H0YGG7 62 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 LELP1Q5T871 98 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 S4R3F8 94 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
TTC3-213ENST00000469939 CFAP47Q6ZTR5 3102 aa0.8□□□□□ -2.28
TTC3-213ENST00000469939 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
TTC3-213ENST00000469939 PRLHP81277 87 aa0.8□□□□□ -2.28
TTC3-213ENST00000469939 APLNQ9ULZ1 77 aa0.8□□□□□ -2.28
TTC3-213ENST00000469939 ANKRD11Q6UB99 2663 aaPredicted RBP0.8□□□□□ -2.28
TTC3-213ENST00000469939 ZNF292O60281 2723 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms