RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TEX15Q9BXT5 2789 aa5.54□□□□□ -1.52
SCAF11-205ENST00000465950 COA5Q86WW8 74 aa5.54□□□□□ -1.52
SCAF11-205ENST00000465950 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
SCAF11-205ENST00000465950 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
SCAF11-205ENST00000465950 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
SCAF11-205ENST00000465950 NSD1Q96L73 2696 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-205ENST00000465950 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
SCAF11-205ENST00000465950 H7BZZ5 65 aa5.5□□□□□ -1.53
SCAF11-205ENST00000465950 C4orf26Q17RF5 130 aa5.5□□□□□ -1.53
SCAF11-205ENST00000465950 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
SCAF11-205ENST00000465950 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
SCAF11-205ENST00000465950 A0A0G2JQZ4 141 aa5.46□□□□□ -1.54
SCAF11-205ENST00000465950 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
SCAF11-205ENST00000465950 ITPR2Q14571 2701 aa5.45□□□□□ -1.54
SCAF11-205ENST00000465950 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
SCAF11-205ENST00000465950 A0A1B0GU33 70 aa5.44□□□□□ -1.54
SCAF11-205ENST00000465950 A0A087X002 238 aa5.44□□□□□ -1.54
SCAF11-205ENST00000465950 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
SCAF11-205ENST00000465950 M0QZ58 72 aa5.44□□□□□ -1.54
SCAF11-205ENST00000465950 MAP1AP78559 2803 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-205ENST00000465950 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
SCAF11-205ENST00000465950 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
SCAF11-205ENST00000465950 A0A0D9SG42 100 aa5.43□□□□□ -1.54
SCAF11-205ENST00000465950 PSPHP1O15172 72 aa5.43□□□□□ -1.54
SCAF11-205ENST00000465950 Q5W150 140 aa5.42□□□□□ -1.54
SCAF11-205ENST00000465950 STAB2Q8WWQ8 2551 aa5.4□□□□□ -1.54
SCAF11-205ENST00000465950 PCNTO95613 3336 aa5.4□□□□□ -1.55
SCAF11-205ENST00000465950 NBEAL1Q6ZS30 2694 aa5.4□□□□□ -1.55
SCAF11-205ENST00000465950 CENPFP49454 3210 aa5.4□□□□□ -1.55
SCAF11-205ENST00000465950 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
SCAF11-205ENST00000465950 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-205ENST00000465950 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
SCAF11-205ENST00000465950 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
SCAF11-205ENST00000465950 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-205ENST00000465950 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
SCAF11-205ENST00000465950 KRTAP4-16G5E9R7 235 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-205ENST00000465950 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
SCAF11-205ENST00000465950 TENM4Q6N022 2769 aa5.34□□□□□ -1.55
SCAF11-205ENST00000465950 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.56
SCAF11-205ENST00000465950 SRCAPQ6ZRS2 3230 aa5.34□□□□□ -1.56
SCAF11-205ENST00000465950 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
SCAF11-205ENST00000465950 MYO15AQ9UKN7 3530 aa5.33□□□□□ -1.56
SCAF11-205ENST00000465950 HIVEP1P15822 2718 aa5.33□□□□□ -1.56
SCAF11-205ENST00000465950 SPTBN5Q9NRC6 3674 aaKnown RBP5.33□□□□□ -1.56
SCAF11-205ENST00000465950 CENPEQ02224 2701 aa5.33□□□□□ -1.56
SCAF11-205ENST00000465950 SMCPP49901 116 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-205ENST00000465950 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
SCAF11-205ENST00000465950 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
SCAF11-205ENST00000465950 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
SCAF11-205ENST00000465950 BRCA2P51587 3418 aa5.29□□□□□ -1.56
SCAF11-205ENST00000465950 Q1T7F1 81 aa5.28□□□□□ -1.56
SCAF11-205ENST00000465950 A8MUU9 505 aa5.27□□□□□ -1.57
SCAF11-205ENST00000465950 BPTFQ12830 3046 aa5.26□□□□□ -1.57
SCAF11-205ENST00000465950 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-205ENST00000465950 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-205ENST00000465950 XP32Q5T750 250 aa5.24□□□□□ -1.57
SCAF11-205ENST00000465950 KRTAP10-10P60014 251 aa5.23□□□□□ -1.57
SCAF11-205ENST00000465950 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
SCAF11-205ENST00000465950 OCR1Q9BZK8 76 aa5.21□□□□□ -1.57
SCAF11-205ENST00000465950 Q8NDZ9 215 aa5.19□□□□□ -1.58
SCAF11-205ENST00000465950 UNC80Q8N2C7 3258 aa5.18□□□□□ -1.58
SCAF11-205ENST00000465950 KRTAP1-4P0C5Y4 121 aa5.17□□□□□ -1.58
SCAF11-205ENST00000465950 DNAH14Q0VDD8 3507 aa5.17□□□□□ -1.58
SCAF11-205ENST00000465950 DMDP11532 3685 aa5.16□□□□□ -1.58
SCAF11-205ENST00000465950 UBR5O95071 2799 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-205ENST00000465950 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
SCAF11-205ENST00000465950 VCANP13611 3396 aa5.15□□□□□ -1.59
SCAF11-205ENST00000465950 SZT2Q5T011 3432 aa5.14□□□□□ -1.59
SCAF11-205ENST00000465950 SPENQ96T58 3664 aaKnown RBP5.14□□□□□ -1.59
SCAF11-205ENST00000465950 TNP1P09430 55 aa5.13□□□□□ -1.59
SCAF11-205ENST00000465950 AKAP13Q12802 2813 aa5.13□□□□□ -1.59
SCAF11-205ENST00000465950 CHD9Q3L8U1 2897 aa5.13□□□□□ -1.59
SCAF11-205ENST00000465950 XIRP2A4UGR9 3374 aa5.13□□□□□ -1.59
SCAF11-205ENST00000465950 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
SCAF11-205ENST00000465950 FLNCQ14315 2725 aa5.1□□□□□ -1.59
SCAF11-205ENST00000465950 KRTAP11-1Q8IUC1 163 aa5.09□□□□□ -1.59
SCAF11-205ENST00000465950 LAMA3Q16787 3333 aa5.09□□□□□ -1.59
SCAF11-205ENST00000465950 TRANK1O15050 2925 aa5.09□□□□□ -1.59
SCAF11-205ENST00000465950 DSPP15924 2871 aaKnown RBP5.06□□□□□ -1.6
SCAF11-205ENST00000465950 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
SCAF11-205ENST00000465950 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
SCAF11-205ENST00000465950 ROMO1P60602 79 aa5.02□□□□□ -1.61
SCAF11-205ENST00000465950 ITPR1Q14643 2758 aa5.02□□□□□ -1.61
SCAF11-205ENST00000465950 Q5VV11 94 aa5.01□□□□□ -1.61
SCAF11-205ENST00000465950 ZFHX4Q86UP3 3567 aa5.01□□□□□ -1.61
SCAF11-205ENST00000465950 PRRC2CQ9Y520 2896 aaKnown RBP5□□□□□ -1.61
SCAF11-205ENST00000465950 CHD7Q9P2D1 2997 aa4.99□□□□□ -1.61
SCAF11-205ENST00000465950 APCP25054 2843 aa4.99□□□□□ -1.61
SCAF11-205ENST00000465950 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
SCAF11-205ENST00000465950 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-205ENST00000465950 MUC3AQ02505 3323 aa4.95□□□□□ -1.62
SCAF11-205ENST00000465950 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
SCAF11-205ENST00000465950 EYSQ5T1H1 3165 aa4.94□□□□□ -1.62
SCAF11-205ENST00000465950 NIPBLQ6KC79 2804 aaeCLIP4.93□□□□□ -1.628e-8■■■□□ 14.7
SCAF11-205ENST00000465950 CEP350Q5VT06 3117 aa4.92□□□□□ -1.62
SCAF11-205ENST00000465950 MGAQ8IWI9 3026 aa4.91□□□□□ -1.62
SCAF11-205ENST00000465950 ASPMQ8IZT6 3477 aa4.85□□□□□ -1.63
SCAF11-205ENST00000465950 REV3LO60673 3130 aa4.84□□□□□ -1.63
SCAF11-205ENST00000465950 UTP20O75691 2785 aaKnown RBP4.84□□□□□ -1.63
SCAF11-205ENST00000465950 A0A0A0MQY5 61 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms