RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 TMEM258P61165 79 aa12.68□□□□□ -0.38
TUBGCP3-204ENST00000464139 UBE2AP49459 152 aa12.66□□□□□ -0.38
TUBGCP3-204ENST00000464139 LINC00474Q9P2X8 69 aa12.65□□□□□ -0.38
TUBGCP3-204ENST00000464139 KMT2AQ03164 3969 aa12.65□□□□□ -0.38
TUBGCP3-204ENST00000464139 HECTD4Q9Y4D8 3996 aa12.65□□□□□ -0.39
TUBGCP3-204ENST00000464139 SNURFQ9Y675 71 aa12.64□□□□□ -0.39
TUBGCP3-204ENST00000464139 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
TUBGCP3-204ENST00000464139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.64□□□□□ -0.39
TUBGCP3-204ENST00000464139 H0Y9J4 135 aa12.63□□□□□ -0.39
TUBGCP3-204ENST00000464139 IGLV8-61A0A075B6I0 122 aa12.61□□□□□ -0.39
TUBGCP3-204ENST00000464139 A0A087WTM6 91 aa12.61□□□□□ -0.39
TUBGCP3-204ENST00000464139 DSCR10P59022 87 aa12.61□□□□□ -0.39
TUBGCP3-204ENST00000464139 TGP01266 2768 aa12.6□□□□□ -0.39
TUBGCP3-204ENST00000464139 KLKP1Q107X0 134 aa12.59□□□□□ -0.39
TUBGCP3-204ENST00000464139 DNAH2Q9P225 4427 aa12.58□□□□□ -0.39
TUBGCP3-204ENST00000464139 FBN3Q75N90 2809 aa12.58□□□□□ -0.4
TUBGCP3-204ENST00000464139 SPACA4Q8TDM5 124 aa12.58□□□□□ -0.4
TUBGCP3-204ENST00000464139 A0A087WSZ3 146 aa12.57□□□□□ -0.4
TUBGCP3-204ENST00000464139 DEFB116Q30KQ4 102 aa12.57□□□□□ -0.4
TUBGCP3-204ENST00000464139 K7EQZ3 153 aa12.57□□□□□ -0.4
TUBGCP3-204ENST00000464139 H7BZZ5 65 aa12.56□□□□□ -0.4
TUBGCP3-204ENST00000464139 OCR1Q9BZK8 76 aa12.56□□□□□ -0.4
TUBGCP3-204ENST00000464139 SPRR1BP22528 89 aa12.56□□□□□ -0.4
TUBGCP3-204ENST00000464139 J3KT08 172 aa12.55□□□□□ -0.4
TUBGCP3-204ENST00000464139 KRTAP13-1Q8IUC0 172 aa12.54□□□□□ -0.4
TUBGCP3-204ENST00000464139 Q6ZR54 194 aa12.53□□□□□ -0.4
TUBGCP3-204ENST00000464139 RTL8CO15255 209 aa12.52□□□□□ -0.41
TUBGCP3-204ENST00000464139 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
TUBGCP3-204ENST00000464139 RPS28P62857 69 aaKnown RBP12.5□□□□□ -0.41
TUBGCP3-204ENST00000464139 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
TUBGCP3-204ENST00000464139 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
TUBGCP3-204ENST00000464139 FAM236DA0A1B0GTK5 79 aa12.48□□□□□ -0.41
TUBGCP3-204ENST00000464139 FAM236CP0DP71 79 aa12.48□□□□□ -0.41
TUBGCP3-204ENST00000464139 OXTP01178 125 aa12.47□□□□□ -0.41
TUBGCP3-204ENST00000464139 RPL37AP61513 92 aaKnown RBP12.45□□□□□ -0.42
TUBGCP3-204ENST00000464139 HCG22E2RYF7 251 aa12.43□□□□□ -0.42
TUBGCP3-204ENST00000464139 C1orf134Q5TEV5 83 aa12.42□□□□□ -0.42
TUBGCP3-204ENST00000464139 PSORS1C2Q9UIG4 136 aa12.42□□□□□ -0.42
TUBGCP3-204ENST00000464139 FRAS1Q86XX4 4008 aa12.42□□□□□ -0.42
TUBGCP3-204ENST00000464139 IGLV9-49A0A0B4J1Y8 123 aa12.41□□□□□ -0.42
TUBGCP3-204ENST00000464139 A0A0U1RQV1 116 aa12.41□□□□□ -0.42
TUBGCP3-204ENST00000464139 LY6G6CO95867 125 aa12.4□□□□□ -0.42
TUBGCP3-204ENST00000464139 DNAH8Q96JB1 4490 aa12.4□□□□□ -0.42
TUBGCP3-204ENST00000464139 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
TUBGCP3-204ENST00000464139 NDUFC1O43677 76 aa12.39□□□□□ -0.43
TUBGCP3-204ENST00000464139 WFDC13Q8IUB5 93 aa12.38□□□□□ -0.43
TUBGCP3-204ENST00000464139 PLAC8Q9NZF1 115 aa12.37□□□□□ -0.43
TUBGCP3-204ENST00000464139 LINC00472Q9H8W2 130 aa12.36□□□□□ -0.43
TUBGCP3-204ENST00000464139 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
TUBGCP3-204ENST00000464139 LCE6AA0A183 80 aa12.32□□□□□ -0.44
TUBGCP3-204ENST00000464139 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
TUBGCP3-204ENST00000464139 HRCT1Q6UXD1 115 aa12.31□□□□□ -0.44
TUBGCP3-204ENST00000464139 DNAH6Q9C0G6 4158 aa12.3□□□□□ -0.44
TUBGCP3-204ENST00000464139 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
TUBGCP3-204ENST00000464139 SERP1Q9Y6X1 66 aa12.3□□□□□ -0.44
TUBGCP3-204ENST00000464139 ZNF861PO60384 105 aa12.29□□□□□ -0.44
TUBGCP3-204ENST00000464139 A8MWP4 228 aa12.28□□□□□ -0.44
TUBGCP3-204ENST00000464139 WWC2-AS2Q96NR7 200 aa12.28□□□□□ -0.44
TUBGCP3-204ENST00000464139 ZNF706Q9Y5V0 76 aaPredicted RBP12.28□□□□□ -0.44
TUBGCP3-204ENST00000464139 KRTAP29-1A8MX34 341 aaPredicted RBP12.27□□□□□ -0.45
TUBGCP3-204ENST00000464139 MOBPQ13875 183 aa12.26□□□□□ -0.45
TUBGCP3-204ENST00000464139 HYDINQ4G0P3 5121 aa12.25□□□□□ -0.45
TUBGCP3-204ENST00000464139 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
TUBGCP3-204ENST00000464139 DNAH5Q8TE73 4624 aa12.24□□□□□ -0.45
TUBGCP3-204ENST00000464139 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
TUBGCP3-204ENST00000464139 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
TUBGCP3-204ENST00000464139 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
TUBGCP3-204ENST00000464139 ATP5EP56381 51 aaPredicted RBP12.22□□□□□ -0.45
TUBGCP3-204ENST00000464139 DNAH11Q96DT5 4516 aa12.22□□□□□ -0.45
TUBGCP3-204ENST00000464139 ZCCHC13Q8WW36 166 aaKnown RBP12.21□□□□□ -0.45
TUBGCP3-204ENST00000464139 Q96NJ1 140 aa12.21□□□□□ -0.45
TUBGCP3-204ENST00000464139 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
TUBGCP3-204ENST00000464139 Q5XG85 94 aa12.18□□□□□ -0.46
TUBGCP3-204ENST00000464139 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
TUBGCP3-204ENST00000464139 CIRBP-AS1Q8TBR5 109 aa12.16□□□□□ -0.46
TUBGCP3-204ENST00000464139 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
TUBGCP3-204ENST00000464139 NDUFB1O75438 58 aa12.15□□□□□ -0.46
TUBGCP3-204ENST00000464139 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
TUBGCP3-204ENST00000464139 MP68P56378 58 aa12.12□□□□□ -0.47
TUBGCP3-204ENST00000464139 PKD1P98161 4303 aa12.11□□□□□ -0.47
TUBGCP3-204ENST00000464139 LINC00208Q96KT6 92 aa12.11□□□□□ -0.47
TUBGCP3-204ENST00000464139 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
TUBGCP3-204ENST00000464139 H0Y9P7 68 aa12.09□□□□□ -0.47
TUBGCP3-204ENST00000464139 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
TUBGCP3-204ENST00000464139 FP248Q71RG6 208 aaPredicted RBP12.07□□□□□ -0.48
TUBGCP3-204ENST00000464139 SMIM26A0A096LP01 95 aa12.06□□□□□ -0.48
TUBGCP3-204ENST00000464139 FAM229BQ4G0N7 80 aa12.06□□□□□ -0.48
TUBGCP3-204ENST00000464139 IGHV6-1A0A0B4J1U7 121 aa12.06□□□□□ -0.48
TUBGCP3-204ENST00000464139 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
TUBGCP3-204ENST00000464139 PRR4Q16378 134 aa12.05□□□□□ -0.48
TUBGCP3-204ENST00000464139 C8orf17Q9NRJ1 99 aa12.04□□□□□ -0.48
TUBGCP3-204ENST00000464139 TRAV22A0A0B4J277 110 aa12.03□□□□□ -0.48
TUBGCP3-204ENST00000464139 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.48
TUBGCP3-204ENST00000464139 A0A1B0GVX0 72 aa12.02□□□□□ -0.48
TUBGCP3-204ENST00000464139 CDK2AP2O75956 126 aa12.01□□□□□ -0.49
TUBGCP3-204ENST00000464139 ASB16-AS1Q495Z4 193 aa12□□□□□ -0.49
TUBGCP3-204ENST00000464139 SPINK6Q6UWN8 80 aa11.99□□□□□ -0.49
TUBGCP3-204ENST00000464139 Q6ZSA8 131 aa11.99□□□□□ -0.49
TUBGCP3-204ENST00000464139 A0A087X002 238 aa11.98□□□□□ -0.49
TUBGCP3-204ENST00000464139 NOTCH2NLQ7Z3S9 236 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms