RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
ITGB1-208ENST00000464001 C6orf48Q9UBA6 75 aa0.89□□□□□ -2.27
ITGB1-208ENST00000464001 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
ITGB1-208ENST00000464001 LINC00308Q8TCZ7 52 aa0.88□□□□□ -2.27
ITGB1-208ENST00000464001 ALMS1Q8TCU4 4167 aa0.88□□□□□ -2.27
ITGB1-208ENST00000464001 NFAT5O94916 1531 aa0.88□□□□□ -2.27
ITGB1-208ENST00000464001 KRTAP2-3P0C7H8 128 aa0.87□□□□□ -2.27
ITGB1-208ENST00000464001 RPS27P42677 84 aaKnown RBP0.87□□□□□ -2.27
ITGB1-208ENST00000464001 RPS27LQ71UM5 84 aaKnown RBP0.87□□□□□ -2.27
ITGB1-208ENST00000464001 KRTAP2-4Q9BYR9 128 aa0.87□□□□□ -2.27
ITGB1-208ENST00000464001 KRTAP2-1Q9BYU5 128 aa0.87□□□□□ -2.27
ITGB1-208ENST00000464001 TMEM167BQ9NRX6 74 aa0.87□□□□□ -2.27
ITGB1-208ENST00000464001 PDE4DIPQ5VU43 2346 aa0.87□□□□□ -2.27
ITGB1-208ENST00000464001 CHD9Q3L8U1 2897 aa0.86□□□□□ -2.27
ITGB1-208ENST00000464001 LINC01546A6NGU7 62 aa0.86□□□□□ -2.27
ITGB1-208ENST00000464001 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
ITGB1-208ENST00000464001 AKAP6Q13023 2319 aa0.86□□□□□ -2.27
ITGB1-208ENST00000464001 CSPG4Q6UVK1 2322 aa0.85□□□□□ -2.27
ITGB1-208ENST00000464001 REV3LO60673 3130 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 TPRP12270 2363 aaKnown RBP0.83□□□□□ -2.28
ITGB1-208ENST00000464001 KIF21BO75037 1637 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 BDP1A6H8Y1 2624 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 TFF3Q07654 80 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 SMR3AQ99954 134 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 FBN2P35556 2912 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 FRAS1Q86XX4 4008 aa0.83□□□□□ -2.28
ITGB1-208ENST00000464001 IGF2RP11717 2491 aa0.82□□□□□ -2.28
ITGB1-208ENST00000464001 VWFP04275 2813 aa0.82□□□□□ -2.28
ITGB1-208ENST00000464001 TRPM2O94759 1503 aa0.82□□□□□ -2.28
ITGB1-208ENST00000464001 ATP7AQ04656 1500 aa0.82□□□□□ -2.28
ITGB1-208ENST00000464001 ABCA2Q9BZC7 2435 aa0.81□□□□□ -2.28
ITGB1-208ENST00000464001 PCNX1Q96RV3 2341 aa0.8□□□□□ -2.28
ITGB1-208ENST00000464001 WT1-ASQ06250 92 aa0.79□□□□□ -2.28
ITGB1-208ENST00000464001 CLTCL1P53675 1640 aa0.78□□□□□ -2.28
ITGB1-208ENST00000464001 CSMD3Q7Z407 3707 aa0.78□□□□□ -2.29
ITGB1-208ENST00000464001 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
ITGB1-208ENST00000464001 SPINK1P00995 79 aa0.77□□□□□ -2.29
ITGB1-208ENST00000464001 S4R3F8 94 aa0.77□□□□□ -2.29
ITGB1-208ENST00000464001 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
ITGB1-208ENST00000464001 DEFB106AQ8N104 65 aa0.76□□□□□ -2.29
ITGB1-208ENST00000464001 CHD6Q8TD26 2715 aa0.76□□□□□ -2.29
ITGB1-208ENST00000464001 SPTA1P02549 2419 aa0.75□□□□□ -2.29
ITGB1-208ENST00000464001 DSPP15924 2871 aaKnown RBP0.75□□□□□ -2.29
ITGB1-208ENST00000464001 ATRQ13535 2644 aa0.74□□□□□ -2.29
ITGB1-208ENST00000464001 SAMD9LQ8IVG5 1584 aa0.74□□□□□ -2.29
ITGB1-208ENST00000464001 APCP25054 2843 aa0.74□□□□□ -2.29
ITGB1-208ENST00000464001 TENM4Q6N022 2769 aa0.74□□□□□ -2.29
ITGB1-208ENST00000464001 PRLHP81277 87 aa0.73□□□□□ -2.29
ITGB1-208ENST00000464001 DEFB135Q30KP9 77 aa0.73□□□□□ -2.29
ITGB1-208ENST00000464001 SMIM2Q9BVW6 85 aa0.73□□□□□ -2.29
ITGB1-208ENST00000464001 U3KQA8 63 aa0.73□□□□□ -2.29
ITGB1-208ENST00000464001 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
ITGB1-208ENST00000464001 KAAG1Q9UBP8 84 aa0.72□□□□□ -2.29
ITGB1-208ENST00000464001 CELSR1Q9NYQ6 3014 aa0.71□□□□□ -2.3
ITGB1-208ENST00000464001 M0R2T5 61 aa0.71□□□□□ -2.3
ITGB1-208ENST00000464001 PRM1P04553 51 aa0.71□□□□□ -2.3
ITGB1-208ENST00000464001 TRANK1O15050 2925 aa0.71□□□□□ -2.3
ITGB1-208ENST00000464001 ANK2Q01484 3957 aa0.71□□□□□ -2.3
ITGB1-208ENST00000464001 H3BUA1 57 aa0.69□□□□□ -2.3
ITGB1-208ENST00000464001 BSNQ9UPA5 3926 aa0.69□□□□□ -2.3
ITGB1-208ENST00000464001 OTOGQ6ZRI0 2925 aa0.68□□□□□ -2.3
ITGB1-208ENST00000464001 ZNF469Q96JG9 3925 aaPredicted RBP0.68□□□□□ -2.3
ITGB1-208ENST00000464001 PRRC2CQ9Y520 2896 aaKnown RBP0.68□□□□□ -2.3
ITGB1-208ENST00000464001 NBASA2RRP1 2371 aa0.68□□□□□ -2.3
ITGB1-208ENST00000464001 TNXBP22105 4242 aa0.68□□□□□ -2.3
ITGB1-208ENST00000464001 H0YGG7 62 aa0.67□□□□□ -2.3
ITGB1-208ENST00000464001 CEP290O15078 2479 aa0.67□□□□□ -2.3
ITGB1-208ENST00000464001 NDUFA1O15239 70 aa0.66□□□□□ -2.3
ITGB1-208ENST00000464001 EP300Q09472 2414 aaPredicted RBP0.66□□□□□ -2.3
ITGB1-208ENST00000464001 DUOX1Q9NRD9 1551 aa0.65□□□□□ -2.31
ITGB1-208ENST00000464001 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
ITGB1-208ENST00000464001 GCC2Q8IWJ2 1684 aa0.64□□□□□ -2.31
ITGB1-208ENST00000464001 CHD8Q9HCK8 2581 aa0.64□□□□□ -2.31
ITGB1-208ENST00000464001 MMP24-AS1A0A0U1RRL7 71 aa0.62□□□□□ -2.31
ITGB1-208ENST00000464001 MROH2BQ7Z745 1585 aa0.62□□□□□ -2.31
ITGB1-208ENST00000464001 AKAP13Q12802 2813 aa0.61□□□□□ -2.31
ITGB1-208ENST00000464001 FAT2Q9NYQ8 4349 aa0.61□□□□□ -2.31
ITGB1-208ENST00000464001 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
ITGB1-208ENST00000464001 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
ITGB1-208ENST00000464001 IGLV5-48A0A075B6I7 105 aa0.61□□□□□ -2.31
ITGB1-208ENST00000464001 TNRC18O15417 2968 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-208ENST00000464001 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
ITGB1-208ENST00000464001 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
ITGB1-208ENST00000464001 PKD1L2Q7Z442 2459 aa0.6□□□□□ -2.31
ITGB1-208ENST00000464001 UBR5O95071 2799 aaPredicted RBP0.59□□□□□ -2.31
ITGB1-208ENST00000464001 NOP10Q9NPE3 64 aaKnown RBP0.59□□□□□ -2.31
ITGB1-208ENST00000464001 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
ITGB1-208ENST00000464001 PRKDCP78527 4128 aaKnown RBP0.58□□□□□ -2.32
ITGB1-208ENST00000464001 ACANP16112 2415 aa0.58□□□□□ -2.32
ITGB1-208ENST00000464001 HECTD1Q9ULT8 2610 aa0.57□□□□□ -2.32
ITGB1-208ENST00000464001 APC2O95996 2303 aa0.57□□□□□ -2.32
ITGB1-208ENST00000464001 DEFB131AP59861 70 aa0.57□□□□□ -2.32
ITGB1-208ENST00000464001 HIVEP3Q5T1R4 2406 aa0.57□□□□□ -2.32
ITGB1-208ENST00000464001 PTPN13Q12923 2485 aa0.56□□□□□ -2.32
ITGB1-208ENST00000464001 LYSTQ99698 3801 aa0.56□□□□□ -2.32
ITGB1-208ENST00000464001 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
ITGB1-208ENST00000464001 CREBBPQ92793 2442 aa0.55□□□□□ -2.32
ITGB1-208ENST00000464001 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
ITGB1-208ENST00000464001 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
ITGB1-208ENST00000464001 SPRR2DP22532 72 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms