RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 CNTRLQ7Z7A1 2325 aa0.85□□□□□ -2.27
SMC4-203ENST00000462668 TRGV1A0A0A0MS02 117 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 NCR3O14931 201 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 SERP2Q8N6R1 65 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 C10orf95Q9H7T3 257 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 CACFD1Q9UGQ2 172 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 KRTDAPP60985 99 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 C10orf128Q5T292 105 aa0.84□□□□□ -2.27
SMC4-203ENST00000462668 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 ATOX1O00244 68 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 AP4S1Q9Y587 144 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 F5P12259 2224 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 SPTY2D1-AS1A0A0U1RR47 76 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 A0A1W2PPM0 123 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 COX6B1P14854 86 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 LCN9Q8WX39 176 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 PRO1854Q9UHT4 67 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
SMC4-203ENST00000462668 DEFB108AA8MXU0 73 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 BCE1O60756 84 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 LY6G6CO95867 125 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 COX6CP09669 75 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 MT1HL1P0DM35 61 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 FDCSPQ8NFU4 85 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 TRBV25-1A0A075B6N4 114 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 FXYD1O00168 92 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 S100A3P33764 101 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 Q6ZSA8 131 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 VAMP8Q9BV40 100 aa0.83□□□□□ -2.28
SMC4-203ENST00000462668 PPP1R17O96001 155 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SEC11AP67812 179 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SORL1Q92673 2214 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SPTBN1Q01082 2364 aaKnown RBP0.82□□□□□ -2.28
SMC4-203ENST00000462668 IGLC7A0M8Q6 106 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SNCAP37840 140 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 BAGE3Q86Y29 109 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SYS1-DBNDD2H3BUS1 97 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 GNG11P61952 73 aa0.82□□□□□ -2.28
SMC4-203ENST00000462668 SPAG11BQ08648 103 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 SPAG11AQ6PDA7 123 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 GYPAP02724 150 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 NBASA2RRP1 2371 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 A0A0D9SG42 100 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 K7EP34 96 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 R4GMQ9 66 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 PMCHL2Q9BQD1 86 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 V9GYH0 126 aa0.81□□□□□ -2.28
SMC4-203ENST00000462668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.282e-6■■■□□ 18.8
SMC4-203ENST00000462668 GNGT2O14610 69 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 UQCR11O14957 56 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 WFDC9Q8NEX5 89 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 C20orf78Q9BR46 151 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 FAIMQ9NVQ4 179 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SMC4-203ENST00000462668 NXT2Q9NPJ8 142 aaKnown RBP0.8□□□□□ -2.28
SMC4-203ENST00000462668 FLG2Q5D862 2391 aaPredicted RBP0.8□□□□□ -2.28
SMC4-203ENST00000462668 CHKB-CPT1BH3BT56 60 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 PIN1P1O15428 100 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 NMBP08949 121 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 SAA2P0DJI9 122 aaPredicted RBP0.79□□□□□ -2.28
SMC4-203ENST00000462668 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
SMC4-203ENST00000462668 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 KRTAP19-6Q3LI70 58 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 Q6ZRX8 168 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 HIVEP2P31629 2446 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 F8VRH5 84 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 ABCA4P78363 2273 aa0.79□□□□□ -2.28
SMC4-203ENST00000462668 M0R135 149 aa0.78□□□□□ -2.28
SMC4-203ENST00000462668 TDRG1Q3Y452 100 aa0.78□□□□□ -2.28
SMC4-203ENST00000462668 INTS1Q8N201 2190 aaKnown RBP0.78□□□□□ -2.28
SMC4-203ENST00000462668 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
SMC4-203ENST00000462668 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
SMC4-203ENST00000462668 PROK2Q9HC23 129 aa0.78□□□□□ -2.29
SMC4-203ENST00000462668 UQCR10Q9UDW1 63 aa0.78□□□□□ -2.29
SMC4-203ENST00000462668 APOC3P02656 99 aa0.77□□□□□ -2.29
SMC4-203ENST00000462668 HIGD1BQ9P298 99 aa0.77□□□□□ -2.29
SMC4-203ENST00000462668 A0A0G2JND7 137 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 CRYM-AS1A6NIL9 109 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 COX17Q14061 63 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 COX14Q96I36 57 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 FAM223AQ8IWN6 122 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 ACYP2P14621 99 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 SPINK9Q5DT21 86 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 FXYD6Q9H0Q3 95 aa0.76□□□□□ -2.29
SMC4-203ENST00000462668 TRAV1-2A0A0B4J238 106 aa0.75□□□□□ -2.29
SMC4-203ENST00000462668 FAM223BA6NKX1 122 aa0.75□□□□□ -2.29
SMC4-203ENST00000462668 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
SMC4-203ENST00000462668 BAGE2Q86Y30 109 aa0.75□□□□□ -2.29
SMC4-203ENST00000462668 TMEM263Q8WUH6 116 aaKnown RBP0.75□□□□□ -2.29
SMC4-203ENST00000462668 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
SMC4-203ENST00000462668 PKDREJQ9NTG1 2253 aa0.74□□□□□ -2.29
SMC4-203ENST00000462668 DOCK11Q5JSL3 2073 aa0.74□□□□□ -2.29
SMC4-203ENST00000462668 PRO1933Q9H354 126 aa0.74□□□□□ -2.29
SMC4-203ENST00000462668 SPINK1P00995 79 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 TRAPPC2P0DI81 140 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms