RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 IGLV9-49A0A0B4J1Y8 123 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 M0R378 163 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 ADAMTSL4-AS1Q5T5F5 129 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 LCA10Q71F78 164 aa3.94□□□□□ -1.78
SMARCC1-204ENST00000462198 A0A087WTM6 91 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 A0A0J9YXV3 536 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 ZNF73O43830 326 aaPredicted RBP3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 CRPP02741 224 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 ANGP03950 147 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 CXCL6P80162 114 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 FAM19A3Q7Z5A8 133 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 CHCHD7Q9BUK0 85 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 Q9HAA7 133 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 NDUFA12Q9UI09 145 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 KLK12Q9UKR0 248 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
SMARCC1-204ENST00000462198 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 A0A087WZ39 114 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 C8orf87E5RJ46 101 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 H3BQ85 93 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 NDUFA1O15239 70 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-204ENST00000462198 PSCAO43653 123 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 PDE6GP18545 87 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 CLPSL2Q6UWE3 100 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 LINC00269Q8N2A0 174 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 TMEM254Q8TBM7 123 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 RMI2Q96E14 147 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 CYP4F30PQ9H0H9 118 aa3.91□□□□□ -1.78
SMARCC1-204ENST00000462198 IGLV4-60A0A075B6I1 120 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 IGKV3OR2-268A0A0C4DH90 116 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 REG3AQ06141 175 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 DIRC1Q969H9 104 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 C14orf132Q9NPU4 83 aa3.9□□□□□ -1.79
SMARCC1-204ENST00000462198 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 ENHOQ6UWT2 76 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 LINC00308Q8TCZ7 52 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 ORMDL1Q9P0S3 153 aa3.89□□□□□ -1.79
SMARCC1-204ENST00000462198 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 IGLV10-54A0A075B6I4 117 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 IGHV3-64A0A075B6Q5 118 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 ZNF625Q96I27 306 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 SNURFQ9Y675 71 aa3.88□□□□□ -1.79
SMARCC1-204ENST00000462198 NREPQ16612 68 aa3.87□□□□□ -1.79
SMARCC1-204ENST00000462198 RNASE13Q5GAN3 156 aaKnown RBP3.87□□□□□ -1.79
SMARCC1-204ENST00000462198 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
SMARCC1-204ENST00000462198 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 A0A087X002 238 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 LECT2O14960 151 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 FAM218AQ96MZ4 157 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 TNXBP22105 4242 aa3.86□□□□□ -1.79
SMARCC1-204ENST00000462198 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 TRAV22A0A0B4J277 110 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 LRCOL1A6NCL2 159 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 A6NN06 94 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 A8MUN3 132 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 SYCNQ0VAF6 134 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 Q6ZRP5 223 aa3.85□□□□□ -1.79
SMARCC1-204ENST00000462198 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 NDUFB1O75438 58 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 C14orf177Q52M58 125 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 Q6ZSA8 131 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 Q8N814 137 aa3.84□□□□□ -1.79
SMARCC1-204ENST00000462198 MUC2Q02817 5179 aa3.84□□□□□ -1.8
SMARCC1-204ENST00000462198 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 COX6A2Q02221 97 aa3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 KIAA0087Q14695 138 aa3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
SMARCC1-204ENST00000462198 IGKV2-28A0A075B6P5 120 aa3.82□□□□□ -1.8
SMARCC1-204ENST00000462198 BPY2O14599 106 aa3.82□□□□□ -1.8
SMARCC1-204ENST00000462198 IGKV2D-28P01615 120 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms