RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
NCL-207ENST00000461347 TENM4Q6N022 2769 aa9.36□□□□□ -0.91
NCL-207ENST00000461347 IGLV5-48A0A075B6I7 105 aa9.36□□□□□ -0.91
NCL-207ENST00000461347 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
NCL-207ENST00000461347 A8MUN3 132 aa9.35□□□□□ -0.91
NCL-207ENST00000461347 KRTAP24-1Q3LI83 254 aa9.35□□□□□ -0.91
NCL-207ENST00000461347 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
NCL-207ENST00000461347 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
NCL-207ENST00000461347 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
NCL-207ENST00000461347 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
NCL-207ENST00000461347 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
NCL-207ENST00000461347 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
NCL-207ENST00000461347 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
NCL-207ENST00000461347 PDZD2O15018 2839 aa9.28□□□□□ -0.92
NCL-207ENST00000461347 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.92
NCL-207ENST00000461347 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
NCL-207ENST00000461347 DSCR10P59022 87 aa9.26□□□□□ -0.93
NCL-207ENST00000461347 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
NCL-207ENST00000461347 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
NCL-207ENST00000461347 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
NCL-207ENST00000461347 CD164Q04900 197 aa9.23□□□□□ -0.93
NCL-207ENST00000461347 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
NCL-207ENST00000461347 A8MWP4 228 aa9.21□□□□□ -0.93
NCL-207ENST00000461347 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
NCL-207ENST00000461347 SPRR4Q96PI1 79 aa9.21□□□□□ -0.94
NCL-207ENST00000461347 PRR15Q8IV56 129 aa9.21□□□□□ -0.94
NCL-207ENST00000461347 MOBPQ13875 183 aa9.2□□□□□ -0.94
NCL-207ENST00000461347 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
NCL-207ENST00000461347 H3BPC8 53 aa9.18□□□□□ -0.94
NCL-207ENST00000461347 SPAG11AQ6PDA7 123 aa9.18□□□□□ -0.94
NCL-207ENST00000461347 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
NCL-207ENST00000461347 SPRR1AP35321 89 aa9.15□□□□□ -0.94
NCL-207ENST00000461347 K7EIL1 84 aa9.14□□□□□ -0.95
NCL-207ENST00000461347 MDFIQ99750 246 aa9.14□□□□□ -0.95
NCL-207ENST00000461347 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
NCL-207ENST00000461347 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
NCL-207ENST00000461347 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
NCL-207ENST00000461347 COA5Q86WW8 74 aa9.12□□□□□ -0.95
NCL-207ENST00000461347 VWFP04275 2813 aa9.11□□□□□ -0.95
NCL-207ENST00000461347 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
NCL-207ENST00000461347 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
NCL-207ENST00000461347 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
NCL-207ENST00000461347 TNP2Q05952 138 aa9.08□□□□□ -0.96
NCL-207ENST00000461347 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
NCL-207ENST00000461347 C9orf163Q8N9P6 203 aa9.07□□□□□ -0.96
NCL-207ENST00000461347 LY6G6CO95867 125 aa9.07□□□□□ -0.96
NCL-207ENST00000461347 KTN1-AS1Q86SY8 53 aa9.06□□□□□ -0.96
NCL-207ENST00000461347 CNBPP62633 177 aaKnown RBP9.06□□□□□ -0.96
NCL-207ENST00000461347 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
NCL-207ENST00000461347 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
NCL-207ENST00000461347 KRTAP4-16G5E9R7 235 aaPredicted RBP9.05□□□□□ -0.96
NCL-207ENST00000461347 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
NCL-207ENST00000461347 Q1T7F1 81 aa9.04□□□□□ -0.96
NCL-207ENST00000461347 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
NCL-207ENST00000461347 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
NCL-207ENST00000461347 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
NCL-207ENST00000461347 A8MU10 97 aa9.02□□□□□ -0.97
NCL-207ENST00000461347 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
NCL-207ENST00000461347 RTL8CO15255 209 aa9□□□□□ -0.97
NCL-207ENST00000461347 H3BS24 57 aa8.99□□□□□ -0.97
NCL-207ENST00000461347 KRTAP1-5Q9BYS1 174 aa8.98□□□□□ -0.97
NCL-207ENST00000461347 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
NCL-207ENST00000461347 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
NCL-207ENST00000461347 C1orf134Q5TEV5 83 aa8.97□□□□□ -0.97
NCL-207ENST00000461347 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.98
NCL-207ENST00000461347 IGKV2-30P06310 120 aa8.96□□□□□ -0.98
NCL-207ENST00000461347 ACYP2P14621 99 aa8.95□□□□□ -0.98
NCL-207ENST00000461347 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
NCL-207ENST00000461347 OTOGQ6ZRI0 2925 aa8.95□□□□□ -0.98
NCL-207ENST00000461347 SPINK1P00995 79 aa8.94□□□□□ -0.98
NCL-207ENST00000461347 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
NCL-207ENST00000461347 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
NCL-207ENST00000461347 IGLV8-61A0A075B6I0 122 aa8.92□□□□□ -0.98
NCL-207ENST00000461347 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
NCL-207ENST00000461347 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
NCL-207ENST00000461347 CMYA5Q8N3K9 4069 aa8.92□□□□□ -0.98
NCL-207ENST00000461347 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
NCL-207ENST00000461347 PRAC1Q96KF2 57 aa8.92□□□□□ -0.98
NCL-207ENST00000461347 Q8N9P0 234 aaPredicted RBP8.92□□□□□ -0.98
NCL-207ENST00000461347 ZNF861PO60384 105 aa8.9□□□□□ -0.98
NCL-207ENST00000461347 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
NCL-207ENST00000461347 A0A1B0GU69 56 aa8.9□□□□□ -0.98
NCL-207ENST00000461347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.9□□□□□ -0.98
NCL-207ENST00000461347 SPACA4Q8TDM5 124 aa8.9□□□□□ -0.99
NCL-207ENST00000461347 PKD1L1Q8TDX9 2849 aa8.89□□□□□ -0.99
NCL-207ENST00000461347 A0A087WTM6 91 aa8.89□□□□□ -0.99
NCL-207ENST00000461347 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
NCL-207ENST00000461347 LINC00313P59037 77 aa8.88□□□□□ -0.99
NCL-207ENST00000461347 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
NCL-207ENST00000461347 PRR26Q8N8Z3 221 aa8.87□□□□□ -0.99
NCL-207ENST00000461347 Q5VV11 94 aa8.87□□□□□ -0.99
NCL-207ENST00000461347 SPRR1BP22528 89 aa8.87□□□□□ -0.99
NCL-207ENST00000461347 KRTAP29-1A8MX34 341 aaPredicted RBP8.85□□□□□ -0.99
NCL-207ENST00000461347 LCA10Q71F78 164 aa8.84□□□□□ -0.99
NCL-207ENST00000461347 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
NCL-207ENST00000461347 FBN1P35555 2871 aaKnown RBP8.84□□□□□ -0.99
NCL-207ENST00000461347 LCE6AA0A183 80 aa8.82□□□□□ -1
NCL-207ENST00000461347 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
NCL-207ENST00000461347 FAM229AH3BQW9 127 aa8.81□□□□□ -1
NCL-207ENST00000461347 PANO1I0J062 215 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms