RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 IGFL1Q6UW32 110 aa5.84□□□□□ -1.47
HCFC1-204ENST00000461098 SERF1AO75920 110 aa5.83□□□□□ -1.48
HCFC1-204ENST00000461098 FABP4P15090 132 aa5.83□□□□□ -1.48
HCFC1-204ENST00000461098 CLEC2BQ92478 149 aa5.82□□□□□ -1.48
HCFC1-204ENST00000461098 TTTY13Q9BZ97 58 aa5.81□□□□□ -1.48
HCFC1-204ENST00000461098 HSPB8Q9UJY1 196 aa5.81□□□□□ -1.48
HCFC1-204ENST00000461098 FAM236DA0A1B0GTK5 79 aa5.8□□□□□ -1.48
HCFC1-204ENST00000461098 A4D1N5 150 aa5.8□□□□□ -1.48
HCFC1-204ENST00000461098 FAM236CP0DP71 79 aa5.8□□□□□ -1.48
HCFC1-204ENST00000461098 HRES1P13985 223 aa5.8□□□□□ -1.48
HCFC1-204ENST00000461098 Q6JHZ5 121 aa5.8□□□□□ -1.48
HCFC1-204ENST00000461098 F8WEM9 126 aa5.79□□□□□ -1.48
HCFC1-204ENST00000461098 S100A2P29034 98 aa5.79□□□□□ -1.48
HCFC1-204ENST00000461098 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 LST1O00453 97 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BKO60814 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BJP06899 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BOP23527 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BBP33778 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BDP58876 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 SNRPEP62304 92 aaKnown RBP5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BCP62807 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST2H2BEQ16778 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BHQ93079 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BNQ99877 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 HIST1H2BMQ99879 126 aa5.78□□□□□ -1.48
HCFC1-204ENST00000461098 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
HCFC1-204ENST00000461098 A6NDN8 102 aa5.77□□□□□ -1.49
HCFC1-204ENST00000461098 OCIAD2Q56VL3 154 aa5.77□□□□□ -1.49
HCFC1-204ENST00000461098 SMIM11BQ8TCY0 68 aa5.77□□□□□ -1.49
HCFC1-204ENST00000461098 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
HCFC1-204ENST00000461098 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
HCFC1-204ENST00000461098 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
HCFC1-204ENST00000461098 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
HCFC1-204ENST00000461098 Q6ZQY7 126 aa5.74□□□□□ -1.49
HCFC1-204ENST00000461098 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
HCFC1-204ENST00000461098 DSCR10P59022 87 aa5.73□□□□□ -1.49
HCFC1-204ENST00000461098 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
HCFC1-204ENST00000461098 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
HCFC1-204ENST00000461098 IFITM1P13164 125 aa5.71□□□□□ -1.5
HCFC1-204ENST00000461098 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
HCFC1-204ENST00000461098 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
HCFC1-204ENST00000461098 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
HCFC1-204ENST00000461098 HIST3H2BBQ8N257 126 aa5.7□□□□□ -1.5
HCFC1-204ENST00000461098 H3BUT2 72 aa5.69□□□□□ -1.5
HCFC1-204ENST00000461098 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
HCFC1-204ENST00000461098 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
HCFC1-204ENST00000461098 Q6ZVH6 145 aa5.67□□□□□ -1.5
HCFC1-204ENST00000461098 COPS9Q8WXC6 57 aa5.67□□□□□ -1.5
HCFC1-204ENST00000461098 HIST1H2BLQ99880 126 aa5.67□□□□□ -1.5
HCFC1-204ENST00000461098 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
HCFC1-204ENST00000461098 SS18L2Q9UHA2 77 aa5.66□□□□□ -1.5
HCFC1-204ENST00000461098 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
HCFC1-204ENST00000461098 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
HCFC1-204ENST00000461098 VAMP3Q15836 100 aa5.65□□□□□ -1.5
HCFC1-204ENST00000461098 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
HCFC1-204ENST00000461098 PET117Q6UWS5 81 aa5.64□□□□□ -1.51
HCFC1-204ENST00000461098 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
HCFC1-204ENST00000461098 PPDPFLQ8WWR9 84 aa5.64□□□□□ -1.51
HCFC1-204ENST00000461098 A0A087WSZ3 146 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 A8MWP4 228 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 SMIM6P0DI80 62 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 LINC00313P59037 77 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 KRTDAPP60985 99 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 TEN1Q86WV5 123 aa5.63□□□□□ -1.51
HCFC1-204ENST00000461098 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
HCFC1-204ENST00000461098 C12orf57Q99622 126 aa5.61□□□□□ -1.51
HCFC1-204ENST00000461098 KMT2DO14686 5537 aa5.59□□□□□ -1.51
HCFC1-204ENST00000461098 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
HCFC1-204ENST00000461098 C3orf79P0CE67 100 aa5.59□□□□□ -1.51
HCFC1-204ENST00000461098 MTURNQ8N3F0 131 aa5.59□□□□□ -1.51
HCFC1-204ENST00000461098 PYY3Q5JQD4 70 aa5.58□□□□□ -1.52
HCFC1-204ENST00000461098 SIGMAR1Q99720 223 aa5.57□□□□□ -1.52
HCFC1-204ENST00000461098 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
HCFC1-204ENST00000461098 A0A1W2PNM2 257 aa5.54□□□□□ -1.52
HCFC1-204ENST00000461098 TSTD3H0UI37 97 aa5.54□□□□□ -1.52
HCFC1-204ENST00000461098 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
HCFC1-204ENST00000461098 NDUFV3P56181 108 aaKnown RBP5.54□□□□□ -1.52
HCFC1-204ENST00000461098 SPINK7P58062 85 aa5.54□□□□□ -1.52
HCFC1-204ENST00000461098 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
HCFC1-204ENST00000461098 ATOH7Q8N100 152 aa5.53□□□□□ -1.52
HCFC1-204ENST00000461098 BVES-AS1Q5T3Y7 98 aa5.52□□□□□ -1.53
HCFC1-204ENST00000461098 SPATA45Q537H7 98 aa5.51□□□□□ -1.53
HCFC1-204ENST00000461098 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
HCFC1-204ENST00000461098 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
HCFC1-204ENST00000461098 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
HCFC1-204ENST00000461098 PAM16Q9Y3D7 125 aa5.5□□□□□ -1.53
HCFC1-204ENST00000461098 H3BMG7 143 aa5.49□□□□□ -1.53
HCFC1-204ENST00000461098 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
HCFC1-204ENST00000461098 FAM218AQ96MZ4 157 aa5.49□□□□□ -1.53
HCFC1-204ENST00000461098 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
HCFC1-204ENST00000461098 A6NN06 94 aa5.48□□□□□ -1.53
HCFC1-204ENST00000461098 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
HCFC1-204ENST00000461098 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
HCFC1-204ENST00000461098 MT1BP07438 61 aa5.45□□□□□ -1.54
HCFC1-204ENST00000461098 TRBV7-4A0A0J9YYF1 115 aa5.44□□□□□ -1.54
HCFC1-204ENST00000461098 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
HCFC1-204ENST00000461098 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
HCFC1-204ENST00000461098 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms