RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 Q8N377 158 aa9.88□□□□□ -0.83
LMNB1-203ENST00000460265 RBM12B-AS1Q9P1G2 102 aa9.88□□□□□ -0.83
LMNB1-203ENST00000460265 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
LMNB1-203ENST00000460265 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
LMNB1-203ENST00000460265 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
LMNB1-203ENST00000460265 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
LMNB1-203ENST00000460265 Q9BRP9 147 aa9.84□□□□□ -0.83
LMNB1-203ENST00000460265 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
LMNB1-203ENST00000460265 C14orf177Q52M58 125 aa9.84□□□□□ -0.83
LMNB1-203ENST00000460265 TGP01266 2768 aa9.83□□□□□ -0.84
LMNB1-203ENST00000460265 ANK2Q01484 3957 aa9.82□□□□□ -0.84
LMNB1-203ENST00000460265 Q5VV11 94 aa9.82□□□□□ -0.84
LMNB1-203ENST00000460265 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
LMNB1-203ENST00000460265 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
LMNB1-203ENST00000460265 A6NED7 52 aa9.81□□□□□ -0.84
LMNB1-203ENST00000460265 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
LMNB1-203ENST00000460265 NDUFB1O75438 58 aa9.8□□□□□ -0.84
LMNB1-203ENST00000460265 MP68P56378 58 aa9.8□□□□□ -0.84
LMNB1-203ENST00000460265 C16orf90A8MZG2 172 aa9.8□□□□□ -0.84
LMNB1-203ENST00000460265 B9D2Q9BPU9 175 aa9.8□□□□□ -0.84
LMNB1-203ENST00000460265 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
LMNB1-203ENST00000460265 CYP4F30PQ9H0H9 118 aa9.79□□□□□ -0.84
LMNB1-203ENST00000460265 NBDYA0A0U1RRE5 68 aa9.78□□□□□ -0.84
LMNB1-203ENST00000460265 ZCCHC13Q8WW36 166 aaKnown RBP9.78□□□□□ -0.84
LMNB1-203ENST00000460265 NUPR2A6NF83 97 aa9.77□□□□□ -0.84
LMNB1-203ENST00000460265 LINC00208Q96KT6 92 aa9.77□□□□□ -0.84
LMNB1-203ENST00000460265 A0A087WSZ3 146 aa9.77□□□□□ -0.85
LMNB1-203ENST00000460265 K7EQZ3 153 aa9.76□□□□□ -0.85
LMNB1-203ENST00000460265 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
LMNB1-203ENST00000460265 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
LMNB1-203ENST00000460265 LY6G6CO95867 125 aa9.76□□□□□ -0.85
LMNB1-203ENST00000460265 LCE6AA0A183 80 aa9.75□□□□□ -0.85
LMNB1-203ENST00000460265 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
LMNB1-203ENST00000460265 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
LMNB1-203ENST00000460265 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
LMNB1-203ENST00000460265 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
LMNB1-203ENST00000460265 NDUFS5O43920 106 aa9.74□□□□□ -0.85
LMNB1-203ENST00000460265 A0A1W2PNM2 257 aa9.73□□□□□ -0.85
LMNB1-203ENST00000460265 ATP11AUNQ6ZP68 121 aa9.72□□□□□ -0.85
LMNB1-203ENST00000460265 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
LMNB1-203ENST00000460265 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
LMNB1-203ENST00000460265 Q8NBF4 154 aa9.71□□□□□ -0.86
LMNB1-203ENST00000460265 DSCR10P59022 87 aa9.7□□□□□ -0.86
LMNB1-203ENST00000460265 H0Y9J4 135 aa9.68□□□□□ -0.86
LMNB1-203ENST00000460265 LCA10Q71F78 164 aa9.68□□□□□ -0.86
LMNB1-203ENST00000460265 C9orf163Q8N9P6 203 aa9.67□□□□□ -0.86
LMNB1-203ENST00000460265 IGLV5-48A0A075B6I7 105 aa9.66□□□□□ -0.86
LMNB1-203ENST00000460265 RPL37AP61513 92 aaKnown RBP9.66□□□□□ -0.86
LMNB1-203ENST00000460265 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
LMNB1-203ENST00000460265 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
LMNB1-203ENST00000460265 SPRR1AP35321 89 aa9.65□□□□□ -0.86
LMNB1-203ENST00000460265 CNBPP62633 177 aaKnown RBP9.65□□□□□ -0.86
LMNB1-203ENST00000460265 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
LMNB1-203ENST00000460265 KRTAP4-16G5E9R7 235 aaPredicted RBP9.64□□□□□ -0.87
LMNB1-203ENST00000460265 A0A1B0GW54 56 aa9.63□□□□□ -0.87
LMNB1-203ENST00000460265 PANO1I0J062 215 aa9.62□□□□□ -0.87
LMNB1-203ENST00000460265 H0Y9P7 68 aa9.62□□□□□ -0.87
LMNB1-203ENST00000460265 KRTAP11-1Q8IUC1 163 aa9.62□□□□□ -0.87
LMNB1-203ENST00000460265 ANAPC11Q9NYG5 84 aa9.61□□□□□ -0.87
LMNB1-203ENST00000460265 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
LMNB1-203ENST00000460265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
LMNB1-203ENST00000460265 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
LMNB1-203ENST00000460265 A6NN06 94 aa9.59□□□□□ -0.87
LMNB1-203ENST00000460265 RTL8CO15255 209 aa9.58□□□□□ -0.88
LMNB1-203ENST00000460265 Q75L30 129 aa9.58□□□□□ -0.88
LMNB1-203ENST00000460265 C1orf134Q5TEV5 83 aa9.57□□□□□ -0.88
LMNB1-203ENST00000460265 A0A087WTM6 91 aa9.57□□□□□ -0.88
LMNB1-203ENST00000460265 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
LMNB1-203ENST00000460265 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
LMNB1-203ENST00000460265 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
LMNB1-203ENST00000460265 COA5Q86WW8 74 aa9.56□□□□□ -0.88
LMNB1-203ENST00000460265 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
LMNB1-203ENST00000460265 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
LMNB1-203ENST00000460265 SPAG11AQ6PDA7 123 aa9.55□□□□□ -0.88
LMNB1-203ENST00000460265 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
LMNB1-203ENST00000460265 SPRR4Q96PI1 79 aa9.54□□□□□ -0.88
LMNB1-203ENST00000460265 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
LMNB1-203ENST00000460265 MOBPQ13875 183 aa9.51□□□□□ -0.89
LMNB1-203ENST00000460265 TNP2Q05952 138 aa9.51□□□□□ -0.89
LMNB1-203ENST00000460265 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
LMNB1-203ENST00000460265 PCOTHQ58A44 107 aa9.5□□□□□ -0.89
LMNB1-203ENST00000460265 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
LMNB1-203ENST00000460265 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
LMNB1-203ENST00000460265 H3BPC8 53 aa9.47□□□□□ -0.89
LMNB1-203ENST00000460265 LYSTQ99698 3801 aa9.47□□□□□ -0.89
LMNB1-203ENST00000460265 DNAH10Q8IVF4 4471 aa9.46□□□□□ -0.89
LMNB1-203ENST00000460265 CMYA5Q8N3K9 4069 aa9.45□□□□□ -0.9
LMNB1-203ENST00000460265 IGHV6-1A0A0B4J1U7 121 aa9.44□□□□□ -0.9
LMNB1-203ENST00000460265 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
LMNB1-203ENST00000460265 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
LMNB1-203ENST00000460265 SPINK7P58062 85 aa9.43□□□□□ -0.9
LMNB1-203ENST00000460265 H3BS24 57 aa9.42□□□□□ -0.9
LMNB1-203ENST00000460265 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
LMNB1-203ENST00000460265 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
LMNB1-203ENST00000460265 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
LMNB1-203ENST00000460265 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
LMNB1-203ENST00000460265 LINC00313P59037 77 aa9.39□□□□□ -0.91
LMNB1-203ENST00000460265 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
LMNB1-203ENST00000460265 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
LMNB1-203ENST00000460265 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms