RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CD164Q04900 197 aa9.33□□□□□ -0.92
PTPRU-205ENST00000460170 KALRNO60229 2985 aa9.33□□□□□ -0.92
PTPRU-205ENST00000460170 SPINT4Q6UDR6 99 aa9.33□□□□□ -0.92
PTPRU-205ENST00000460170 FLNCQ14315 2725 aa9.33□□□□□ -0.92
PTPRU-205ENST00000460170 ATMQ13315 3056 aa9.33□□□□□ -0.92
PTPRU-205ENST00000460170 BOD1L1Q8NFC6 3051 aa9.32□□□□□ -0.92
PTPRU-205ENST00000460170 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
PTPRU-205ENST00000460170 FRYLO94915 3013 aa9.3□□□□□ -0.92
PTPRU-205ENST00000460170 SPRR1AP35321 89 aa9.28□□□□□ -0.92
PTPRU-205ENST00000460170 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
PTPRU-205ENST00000460170 LINC00304Q8N9R0 145 aa9.27□□□□□ -0.93
PTPRU-205ENST00000460170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
PTPRU-205ENST00000460170 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
PTPRU-205ENST00000460170 COL12A1Q99715 3063 aa9.22□□□□□ -0.93
PTPRU-205ENST00000460170 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.93
PTPRU-205ENST00000460170 DMXL2Q8TDJ6 3036 aa9.21□□□□□ -0.93
PTPRU-205ENST00000460170 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
PTPRU-205ENST00000460170 UQCR11O14957 56 aa9.2□□□□□ -0.94
PTPRU-205ENST00000460170 NBEAL1Q6ZS30 2694 aa9.2□□□□□ -0.94
PTPRU-205ENST00000460170 LRBAP50851 2863 aa9.19□□□□□ -0.94
PTPRU-205ENST00000460170 COL6A3P12111 3177 aa9.18□□□□□ -0.94
PTPRU-205ENST00000460170 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
PTPRU-205ENST00000460170 TNP2Q05952 138 aa9.18□□□□□ -0.94
PTPRU-205ENST00000460170 TACC2O95359 2948 aa9.18□□□□□ -0.94
PTPRU-205ENST00000460170 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
PTPRU-205ENST00000460170 LCA10Q71F78 164 aa9.17□□□□□ -0.94
PTPRU-205ENST00000460170 C9orf92A6NGG3 77 aa9.14□□□□□ -0.95
PTPRU-205ENST00000460170 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
PTPRU-205ENST00000460170 SPEGQ15772 3267 aa9.12□□□□□ -0.95
PTPRU-205ENST00000460170 SPRR1BP22528 89 aa9.12□□□□□ -0.95
PTPRU-205ENST00000460170 MIR22HGQ0VDD5 57 aa9.11□□□□□ -0.95
PTPRU-205ENST00000460170 Q1T7F1 81 aa9.1□□□□□ -0.95
PTPRU-205ENST00000460170 MMP24-AS1A0A0U1RRL7 71 aa9.09□□□□□ -0.95
PTPRU-205ENST00000460170 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
PTPRU-205ENST00000460170 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
PTPRU-205ENST00000460170 SPTBN5Q9NRC6 3674 aaKnown RBP9.07□□□□□ -0.96
PTPRU-205ENST00000460170 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
PTPRU-205ENST00000460170 LINC00472Q9H8W2 130 aa9.06□□□□□ -0.96
PTPRU-205ENST00000460170 REV3LO60673 3130 aa9.06□□□□□ -0.96
PTPRU-205ENST00000460170 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
PTPRU-205ENST00000460170 ZZEF1O43149 2961 aa9.04□□□□□ -0.96
PTPRU-205ENST00000460170 UTP20O75691 2785 aaKnown RBP9.04□□□□□ -0.96
PTPRU-205ENST00000460170 NSD1Q96L73 2696 aaPredicted RBP9.04□□□□□ -0.96
PTPRU-205ENST00000460170 Q5XG85 94 aa9.02□□□□□ -0.97
PTPRU-205ENST00000460170 Q8N1X5 172 aa9.02□□□□□ -0.97
PTPRU-205ENST00000460170 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
PTPRU-205ENST00000460170 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
PTPRU-205ENST00000460170 TNRC18O15417 2968 aaPredicted RBP9.01□□□□□ -0.97
PTPRU-205ENST00000460170 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
PTPRU-205ENST00000460170 CRIPTQ9P021 101 aa9□□□□□ -0.97
PTPRU-205ENST00000460170 EYSQ5T1H1 3165 aa9□□□□□ -0.97
PTPRU-205ENST00000460170 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
PTPRU-205ENST00000460170 FP248Q71RG6 208 aaPredicted RBP9□□□□□ -0.97
PTPRU-205ENST00000460170 HRES1P13985 223 aa8.98□□□□□ -0.97
PTPRU-205ENST00000460170 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
PTPRU-205ENST00000460170 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
PTPRU-205ENST00000460170 DMXL1Q9Y485 3027 aa8.95□□□□□ -0.98
PTPRU-205ENST00000460170 ZANQ9Y493 2812 aa8.94□□□□□ -0.98
PTPRU-205ENST00000460170 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
PTPRU-205ENST00000460170 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
PTPRU-205ENST00000460170 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
PTPRU-205ENST00000460170 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.98
PTPRU-205ENST00000460170 OXTP01178 125 aa8.9□□□□□ -0.98
PTPRU-205ENST00000460170 J3QL48 77 aa8.9□□□□□ -0.98
PTPRU-205ENST00000460170 Q75L30 129 aa8.9□□□□□ -0.98
PTPRU-205ENST00000460170 APCP25054 2843 aa8.9□□□□□ -0.99
PTPRU-205ENST00000460170 H3BS24 57 aa8.89□□□□□ -0.99
PTPRU-205ENST00000460170 LINC01558Q9Y6Z2 57 aa8.88□□□□□ -0.99
PTPRU-205ENST00000460170 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
PTPRU-205ENST00000460170 NIPBLQ6KC79 2804 aaeCLIP8.87□□□□□ -0.99
PTPRU-205ENST00000460170 PANO1I0J062 215 aa8.87□□□□□ -0.99
PTPRU-205ENST00000460170 USP34Q70CQ2 3546 aa8.86□□□□□ -0.99
PTPRU-205ENST00000460170 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
PTPRU-205ENST00000460170 Q5W150 140 aa8.85□□□□□ -0.99
PTPRU-205ENST00000460170 HRNRQ86YZ3 2850 aaPredicted RBP8.85□□□□□ -0.99
PTPRU-205ENST00000460170 CELSR2Q9HCU4 2923 aa8.84□□□□□ -0.99
PTPRU-205ENST00000460170 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
PTPRU-205ENST00000460170 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
PTPRU-205ENST00000460170 LINC01554Q52M75 96 aa8.8□□□□□ -1
PTPRU-205ENST00000460170 Q5VV11 94 aa8.8□□□□□ -1
PTPRU-205ENST00000460170 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
PTPRU-205ENST00000460170 KRTAP10-2P60368 255 aa8.78□□□□□ -1
PTPRU-205ENST00000460170 PRAC1Q96KF2 57 aa8.78□□□□□ -1
PTPRU-205ENST00000460170 A0A0D9SG42 100 aa8.78□□□□□ -1
PTPRU-205ENST00000460170 KRTAP10-1P60331 282 aa8.78□□□□□ -1
PTPRU-205ENST00000460170 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
PTPRU-205ENST00000460170 Q6ZR54 194 aa8.77□□□□□ -1.01
PTPRU-205ENST00000460170 KMT2BQ9UMN6 2715 aaPredicted RBP8.77□□□□□ -1.01
PTPRU-205ENST00000460170 MYO15AQ9UKN7 3530 aa8.76□□□□□ -1.01
PTPRU-205ENST00000460170 A0A1B0GU33 70 aa8.75□□□□□ -1.01
PTPRU-205ENST00000460170 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
PTPRU-205ENST00000460170 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
PTPRU-205ENST00000460170 NF1P21359 2839 aa8.71□□□□□ -1.02
PTPRU-205ENST00000460170 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
PTPRU-205ENST00000460170 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
PTPRU-205ENST00000460170 SPINK7P58062 85 aa8.69□□□□□ -1.02
PTPRU-205ENST00000460170 FBN2P35556 2912 aa8.69□□□□□ -1.02
PTPRU-205ENST00000460170 Q6ZSA8 131 aa8.68□□□□□ -1.02
PTPRU-205ENST00000460170 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
PTPRU-205ENST00000460170 A0A087X002 238 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms