RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 PSCAO43653 123 aa12.39□□□□□ -0.43
CNEP1R1-203ENST00000458059 IGFL1Q6UW32 110 aa12.38□□□□□ -0.43
CNEP1R1-203ENST00000458059 HUWE1Q7Z6Z7 4374 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-203ENST00000458059 IGLV5-37A0A075B6J1 123 aa12.37□□□□□ -0.43
CNEP1R1-203ENST00000458059 SPRR4Q96PI1 79 aa12.36□□□□□ -0.43
CNEP1R1-203ENST00000458059 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
CNEP1R1-203ENST00000458059 BRK1Q8WUW1 75 aa12.34□□□□□ -0.43
CNEP1R1-203ENST00000458059 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.43
CNEP1R1-203ENST00000458059 ATP5EP56381 51 aaPredicted RBP12.33□□□□□ -0.44
CNEP1R1-203ENST00000458059 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
CNEP1R1-203ENST00000458059 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
CNEP1R1-203ENST00000458059 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
CNEP1R1-203ENST00000458059 K7EIL1 84 aa12.31□□□□□ -0.44
CNEP1R1-203ENST00000458059 UBE2AP49459 152 aa12.3□□□□□ -0.44
CNEP1R1-203ENST00000458059 PKIGQ9Y2B9 76 aa12.29□□□□□ -0.44
CNEP1R1-203ENST00000458059 UBE2DNLQ8IWF7 75 aa12.28□□□□□ -0.44
CNEP1R1-203ENST00000458059 DNAH3Q8TD57 4116 aa12.28□□□□□ -0.44
CNEP1R1-203ENST00000458059 C16orf90A8MZG2 172 aa12.24□□□□□ -0.45
CNEP1R1-203ENST00000458059 C1orf64Q8NEQ6 169 aa12.24□□□□□ -0.45
CNEP1R1-203ENST00000458059 PRO0628Q9UI54 55 aa12.23□□□□□ -0.45
CNEP1R1-203ENST00000458059 A0A1B0GW54 56 aa12.22□□□□□ -0.45
CNEP1R1-203ENST00000458059 LINC00208Q96KT6 92 aa12.21□□□□□ -0.46
CNEP1R1-203ENST00000458059 DNAH7Q8WXX0 4024 aa12.2□□□□□ -0.46
CNEP1R1-203ENST00000458059 hDV103S1A0JD37 113 aa12.18□□□□□ -0.46
CNEP1R1-203ENST00000458059 ZCCHC13Q8WW36 166 aaKnown RBP12.17□□□□□ -0.46
CNEP1R1-203ENST00000458059 PSPHP1O15172 72 aa12.17□□□□□ -0.46
CNEP1R1-203ENST00000458059 LCE6AA0A183 80 aa12.16□□□□□ -0.46
CNEP1R1-203ENST00000458059 PANO1I0J062 215 aa12.15□□□□□ -0.46
CNEP1R1-203ENST00000458059 H0Y9J4 135 aa12.14□□□□□ -0.47
CNEP1R1-203ENST00000458059 MP68P56378 58 aa12.12□□□□□ -0.47
CNEP1R1-203ENST00000458059 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
CNEP1R1-203ENST00000458059 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
CNEP1R1-203ENST00000458059 IGLV9-49A0A0B4J1Y8 123 aa12.1□□□□□ -0.47
CNEP1R1-203ENST00000458059 H0Y9P7 68 aa12.08□□□□□ -0.48
CNEP1R1-203ENST00000458059 IGLV8-61A0A075B6I0 122 aa12.05□□□□□ -0.48
CNEP1R1-203ENST00000458059 PRR15Q8IV56 129 aa12.05□□□□□ -0.48
CNEP1R1-203ENST00000458059 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
CNEP1R1-203ENST00000458059 KRTAP29-1A8MX34 341 aaPredicted RBP12.03□□□□□ -0.48
CNEP1R1-203ENST00000458059 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
CNEP1R1-203ENST00000458059 APLNQ9ULZ1 77 aa12.03□□□□□ -0.48
CNEP1R1-203ENST00000458059 PLECQ15149 4684 aaKnown RBP12.02□□□□□ -0.49
CNEP1R1-203ENST00000458059 LINC00472Q9H8W2 130 aa12.01□□□□□ -0.49
CNEP1R1-203ENST00000458059 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
CNEP1R1-203ENST00000458059 A8MWP4 228 aa12□□□□□ -0.49
CNEP1R1-203ENST00000458059 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
CNEP1R1-203ENST00000458059 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
CNEP1R1-203ENST00000458059 A8MUN3 132 aa11.97□□□□□ -0.49
CNEP1R1-203ENST00000458059 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
CNEP1R1-203ENST00000458059 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
CNEP1R1-203ENST00000458059 TGP01266 2768 aa11.96□□□□□ -0.49
CNEP1R1-203ENST00000458059 NDUFB1O75438 58 aa11.96□□□□□ -0.5
CNEP1R1-203ENST00000458059 MDFIQ99750 246 aa11.94□□□□□ -0.5
CNEP1R1-203ENST00000458059 A8MU10 97 aa11.93□□□□□ -0.5
CNEP1R1-203ENST00000458059 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
CNEP1R1-203ENST00000458059 NBDYA0A0U1RRE5 68 aa11.92□□□□□ -0.5
CNEP1R1-203ENST00000458059 NDUFS5O43920 106 aa11.92□□□□□ -0.5
CNEP1R1-203ENST00000458059 SPRR1BP22528 89 aa11.92□□□□□ -0.5
CNEP1R1-203ENST00000458059 Q1T7F1 81 aa11.91□□□□□ -0.5
CNEP1R1-203ENST00000458059 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
CNEP1R1-203ENST00000458059 C1orf195Q5TG92 126 aa11.89□□□□□ -0.51
CNEP1R1-203ENST00000458059 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
CNEP1R1-203ENST00000458059 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
CNEP1R1-203ENST00000458059 MOBPQ13875 183 aa11.86□□□□□ -0.51
CNEP1R1-203ENST00000458059 KRTAP13-1Q8IUC0 172 aa11.84□□□□□ -0.51
CNEP1R1-203ENST00000458059 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
CNEP1R1-203ENST00000458059 Q6ZRN7 208 aaPredicted RBP11.82□□□□□ -0.52
CNEP1R1-203ENST00000458059 Q96NJ1 140 aa11.82□□□□□ -0.52
CNEP1R1-203ENST00000458059 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
CNEP1R1-203ENST00000458059 A0A087X002 238 aa11.8□□□□□ -0.52
CNEP1R1-203ENST00000458059 NOTCH2NLQ7Z3S9 236 aa11.8□□□□□ -0.52
CNEP1R1-203ENST00000458059 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
CNEP1R1-203ENST00000458059 SPACA4Q8TDM5 124 aa11.79□□□□□ -0.52
CNEP1R1-203ENST00000458059 PSORS1C2Q9UIG4 136 aa11.79□□□□□ -0.52
CNEP1R1-203ENST00000458059 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
CNEP1R1-203ENST00000458059 C8orf17Q9NRJ1 99 aa11.77□□□□□ -0.53
CNEP1R1-203ENST00000458059 MEGF8Q7Z7M0 2845 aa11.77□□□□□ -0.53
CNEP1R1-203ENST00000458059 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
CNEP1R1-203ENST00000458059 CD164Q04900 197 aa11.76□□□□□ -0.53
CNEP1R1-203ENST00000458059 Q5VV11 94 aa11.76□□□□□ -0.53
CNEP1R1-203ENST00000458059 COA5Q86WW8 74 aa11.76□□□□□ -0.53
CNEP1R1-203ENST00000458059 Q8N9P0 234 aaPredicted RBP11.76□□□□□ -0.53
CNEP1R1-203ENST00000458059 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
CNEP1R1-203ENST00000458059 SPANXA2-OT1Q8N9U9 137 aa11.74□□□□□ -0.53
CNEP1R1-203ENST00000458059 DNAH8Q96JB1 4490 aa11.74□□□□□ -0.53
CNEP1R1-203ENST00000458059 A0A087WTM6 91 aa11.73□□□□□ -0.53
CNEP1R1-203ENST00000458059 FBN3Q75N90 2809 aa11.73□□□□□ -0.53
CNEP1R1-203ENST00000458059 H3BPC8 53 aa11.73□□□□□ -0.53
CNEP1R1-203ENST00000458059 RTL8CO15255 209 aa11.72□□□□□ -0.53
CNEP1R1-203ENST00000458059 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
CNEP1R1-203ENST00000458059 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
CNEP1R1-203ENST00000458059 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
CNEP1R1-203ENST00000458059 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
CNEP1R1-203ENST00000458059 PRKDCP78527 4128 aaKnown RBP11.68□□□□□ -0.54
CNEP1R1-203ENST00000458059 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
CNEP1R1-203ENST00000458059 DYNC2H1Q8NCM8 4307 aaKnown RBP11.68□□□□□ -0.54
CNEP1R1-203ENST00000458059 SPTSSBQ8NFR3 76 aa11.67□□□□□ -0.54
CNEP1R1-203ENST00000458059 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
CNEP1R1-203ENST00000458059 V9GYY9 64 aa11.67□□□□□ -0.54
CNEP1R1-203ENST00000458059 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
CNEP1R1-203ENST00000458059 IGLV5-52A0A0A0MRZ9 124 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms