RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 ALMS1Q8TCU4 4167 aa0.7□□□□□ -2.3
TRGVB-201ENST00000453257 FBN2P35556 2912 aa0.7□□□□□ -2.3
TRGVB-201ENST00000453257 TFF3Q07654 80 aa0.7□□□□□ -2.3
TRGVB-201ENST00000453257 CLTCL1P53675 1640 aa0.7□□□□□ -2.3
TRGVB-201ENST00000453257 PLCE1Q9P212 2302 aa0.7□□□□□ -2.3
TRGVB-201ENST00000453257 WT1-ASQ06250 92 aa0.69□□□□□ -2.3
TRGVB-201ENST00000453257 MROH2BQ7Z745 1585 aa0.69□□□□□ -2.3
TRGVB-201ENST00000453257 GCC2Q8IWJ2 1684 aa0.69□□□□□ -2.3
TRGVB-201ENST00000453257 C2CD3Q4AC94 2353 aa0.68□□□□□ -2.3
TRGVB-201ENST00000453257 NDUFA1O15239 70 aa0.68□□□□□ -2.3
TRGVB-201ENST00000453257 SNRPGP62308 76 aaKnown RBP0.68□□□□□ -2.3
TRGVB-201ENST00000453257 DEFB109BQ30KR1 87 aa0.68□□□□□ -2.3
TRGVB-201ENST00000453257 ZNF462Q96JM2 2506 aa0.68□□□□□ -2.3
TRGVB-201ENST00000453257 CACNA1HO95180 2353 aa0.68□□□□□ -2.3
TRGVB-201ENST00000453257 TTC28Q96AY4 2481 aa0.67□□□□□ -2.3
TRGVB-201ENST00000453257 H3BUA1 57 aa0.65□□□□□ -2.31
TRGVB-201ENST00000453257 S4R3F8 94 aa0.65□□□□□ -2.31
TRGVB-201ENST00000453257 MUC5ACP98088 5654 aa0.65□□□□□ -2.31
TRGVB-201ENST00000453257 SPTBN2O15020 2390 aa0.64□□□□□ -2.31
TRGVB-201ENST00000453257 POLQO75417 2590 aa0.64□□□□□ -2.31
TRGVB-201ENST00000453257 IGLV5-48A0A075B6I7 105 aa0.63□□□□□ -2.31
TRGVB-201ENST00000453257 WFDC10BQ8IUB3 73 aa0.63□□□□□ -2.31
TRGVB-201ENST00000453257 DEFB106AQ8N104 65 aa0.63□□□□□ -2.31
TRGVB-201ENST00000453257 REV3LO60673 3130 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 CELSR2Q9HCU4 2923 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 ZNF292O60281 2723 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 SPINK6Q6UWN8 80 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 SMR3AQ99954 134 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 KAAG1Q9UBP8 84 aa0.62□□□□□ -2.31
TRGVB-201ENST00000453257 PRLHP81277 87 aa0.61□□□□□ -2.31
TRGVB-201ENST00000453257 CHD9Q3L8U1 2897 aa0.61□□□□□ -2.31
TRGVB-201ENST00000453257 SPTBN1Q01082 2364 aaKnown RBP0.6□□□□□ -2.31
TRGVB-201ENST00000453257 MMP24-AS1A0A0U1RRL7 71 aa0.6□□□□□ -2.31
TRGVB-201ENST00000453257 DEFB131AP59861 70 aa0.6□□□□□ -2.31
TRGVB-201ENST00000453257 WNK2Q9Y3S1 2297 aa0.6□□□□□ -2.31
TRGVB-201ENST00000453257 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
TRGVB-201ENST00000453257 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
TRGVB-201ENST00000453257 KRTAP2-1Q9BYU5 128 aa0.59□□□□□ -2.31
TRGVB-201ENST00000453257 PKDREJQ9NTG1 2253 aa0.59□□□□□ -2.32
TRGVB-201ENST00000453257 TENM3Q9P273 2699 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 TENM4Q6N022 2769 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 GVINP1Q7Z2Y8 2422 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 KNL1Q8NG31 2342 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
TRGVB-201ENST00000453257 IGF2RP11717 2491 aa0.57□□□□□ -2.32
TRGVB-201ENST00000453257 SPINK1P00995 79 aa0.57□□□□□ -2.32
TRGVB-201ENST00000453257 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
TRGVB-201ENST00000453257 NOP10Q9NPE3 64 aaKnown RBP0.57□□□□□ -2.32
TRGVB-201ENST00000453257 DSPP15924 2871 aaKnown RBP0.56□□□□□ -2.32
TRGVB-201ENST00000453257 TRANK1O15050 2925 aa0.56□□□□□ -2.32
TRGVB-201ENST00000453257 CSMD3Q7Z407 3707 aa0.56□□□□□ -2.32
TRGVB-201ENST00000453257 M0R2T5 61 aa0.56□□□□□ -2.32
TRGVB-201ENST00000453257 F8P00451 2351 aa0.56□□□□□ -2.32
TRGVB-201ENST00000453257 VWFP04275 2813 aa0.55□□□□□ -2.32
TRGVB-201ENST00000453257 H0YGG7 62 aa0.55□□□□□ -2.32
TRGVB-201ENST00000453257 ABCA2Q9BZC7 2435 aa0.55□□□□□ -2.32
TRGVB-201ENST00000453257 BDP1A6H8Y1 2624 aa0.54□□□□□ -2.32
TRGVB-201ENST00000453257 TPRP12270 2363 aaKnown RBP0.54□□□□□ -2.32
TRGVB-201ENST00000453257 POLR2KP53803 58 aaKnown RBP0.54□□□□□ -2.32
TRGVB-201ENST00000453257 U3KQA8 63 aa0.54□□□□□ -2.32
TRGVB-201ENST00000453257 SYNE2Q8WXH0 6885 aaKnown RBP0.53□□□□□ -2.32
TRGVB-201ENST00000453257 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
TRGVB-201ENST00000453257 PDE4DIPQ5VU43 2346 aa0.53□□□□□ -2.32
TRGVB-201ENST00000453257 PIEZO1Q92508 2521 aa0.53□□□□□ -2.32
TRGVB-201ENST00000453257 PRM1P04553 51 aa0.52□□□□□ -2.33
TRGVB-201ENST00000453257 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
TRGVB-201ENST00000453257 OTOGQ6ZRI0 2925 aa0.52□□□□□ -2.33
TRGVB-201ENST00000453257 TNXBP22105 4242 aa0.52□□□□□ -2.33
TRGVB-201ENST00000453257 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
TRGVB-201ENST00000453257 ANK2Q01484 3957 aa0.51□□□□□ -2.33
TRGVB-201ENST00000453257 A8MTW9 85 aa0.51□□□□□ -2.33
TRGVB-201ENST00000453257 M0QY20 66 aa0.51□□□□□ -2.33
TRGVB-201ENST00000453257 RPL39P62891 51 aaKnown RBP0.51□□□□□ -2.33
TRGVB-201ENST00000453257 AKAP6Q13023 2319 aa0.51□□□□□ -2.33
TRGVB-201ENST00000453257 PRRC2CQ9Y520 2896 aaKnown RBP0.51□□□□□ -2.33
TRGVB-201ENST00000453257 AKAP13Q12802 2813 aa0.51□□□□□ -2.33
TRGVB-201ENST00000453257 CELSR1Q9NYQ6 3014 aa0.5□□□□□ -2.33
TRGVB-201ENST00000453257 CHD6Q8TD26 2715 aa0.5□□□□□ -2.33
TRGVB-201ENST00000453257 CLPSL2Q6UWE3 100 aa0.5□□□□□ -2.33
TRGVB-201ENST00000453257 ATRQ13535 2644 aa0.5□□□□□ -2.33
TRGVB-201ENST00000453257 A0A0C4DFX4 3053 aa0.49□□□□□ -2.33
TRGVB-201ENST00000453257 RPL39LQ96EH5 51 aaKnown RBP0.48□□□□□ -2.33
TRGVB-201ENST00000453257 EP300Q09472 2414 aaPredicted RBP0.48□□□□□ -2.33
TRGVB-201ENST00000453257 APCP25054 2843 aa0.47□□□□□ -2.33
TRGVB-201ENST00000453257 PRKDCP78527 4128 aaKnown RBP0.47□□□□□ -2.33
TRGVB-201ENST00000453257 C9orf92A6NGG3 77 aa0.47□□□□□ -2.33
TRGVB-201ENST00000453257 M0QZ58 72 aa0.47□□□□□ -2.33
TRGVB-201ENST00000453257 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
TRGVB-201ENST00000453257 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
TRGVB-201ENST00000453257 CEP290O15078 2479 aa0.45□□□□□ -2.34
TRGVB-201ENST00000453257 NCOR1O75376 2440 aa0.45□□□□□ -2.34
TRGVB-201ENST00000453257 TNRC18O15417 2968 aaPredicted RBP0.45□□□□□ -2.34
TRGVB-201ENST00000453257 ARHGAP5-AS1Q96IT6 56 aa0.45□□□□□ -2.34
TRGVB-201ENST00000453257 SPTA1P02549 2419 aa0.45□□□□□ -2.34
TRGVB-201ENST00000453257 BSNQ9UPA5 3926 aa0.45□□□□□ -2.34
TRGVB-201ENST00000453257 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
TRGVB-201ENST00000453257 HECTD1Q9ULT8 2610 aa0.44□□□□□ -2.34
TRGVB-201ENST00000453257 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
TRGVB-201ENST00000453257 SPRR2DP22532 72 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms