RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 SPINK1P00995 79 aa1.31□□□□□ -2.2
VPS8-212ENST00000452666 DEFB104AQ8WTQ1 72 aa1.31□□□□□ -2.2
VPS8-212ENST00000452666 FAM208BQ5VWN6 2430 aa1.31□□□□□ -2.2
VPS8-212ENST00000452666 JMJD1CQ15652 2540 aa1.31□□□□□ -2.2
VPS8-212ENST00000452666 KRTAP12-3P60328 96 aa1.29□□□□□ -2.2
VPS8-212ENST00000452666 ALMS1Q8TCU4 4167 aa1.29□□□□□ -2.2
VPS8-212ENST00000452666 A0A0D9SG42 100 aa1.28□□□□□ -2.2
VPS8-212ENST00000452666 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
VPS8-212ENST00000452666 WNK2Q9Y3S1 2297 aa1.27□□□□□ -2.21
VPS8-212ENST00000452666 CLPSL2Q6UWE3 100 aa1.27□□□□□ -2.21
VPS8-212ENST00000452666 TMEM167AQ8TBQ9 72 aa1.27□□□□□ -2.21
VPS8-212ENST00000452666 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
VPS8-212ENST00000452666 ZDBF2Q9HCK1 2354 aa1.27□□□□□ -2.21
VPS8-212ENST00000452666 NAV3Q8IVL0 2385 aa1.26□□□□□ -2.21
VPS8-212ENST00000452666 DOPEY2Q9Y3R5 2298 aa1.26□□□□□ -2.21
VPS8-212ENST00000452666 K7EIM0 57 aa1.25□□□□□ -2.21
VPS8-212ENST00000452666 COL6A6A6NMZ7 2263 aa1.24□□□□□ -2.21
VPS8-212ENST00000452666 H0YGG7 62 aa1.23□□□□□ -2.21
VPS8-212ENST00000452666 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
VPS8-212ENST00000452666 PTPRQQ9UMZ3 2332 aa1.22□□□□□ -2.21
VPS8-212ENST00000452666 DEFB108AA8MXU0 73 aa1.22□□□□□ -2.21
VPS8-212ENST00000452666 PDE4DIPQ5VU43 2346 aa1.21□□□□□ -2.22
VPS8-212ENST00000452666 KNL1Q8NG31 2342 aa1.2□□□□□ -2.22
VPS8-212ENST00000452666 ZNF462Q96JM2 2506 aa1.19□□□□□ -2.22
VPS8-212ENST00000452666 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
VPS8-212ENST00000452666 TPRP12270 2363 aaKnown RBP1.18□□□□□ -2.22
VPS8-212ENST00000452666 REV3LO60673 3130 aa1.18□□□□□ -2.22
VPS8-212ENST00000452666 PTPRZ1P23471 2315 aaPredicted RBP1.18□□□□□ -2.22
VPS8-212ENST00000452666 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
VPS8-212ENST00000452666 ROS1P08922 2347 aa1.16□□□□□ -2.22
VPS8-212ENST00000452666 TRANK1O15050 2925 aa1.16□□□□□ -2.22
VPS8-212ENST00000452666 DSPP15924 2871 aaKnown RBP1.15□□□□□ -2.23
VPS8-212ENST00000452666 PCNX1Q96RV3 2341 aa1.14□□□□□ -2.23
VPS8-212ENST00000452666 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
VPS8-212ENST00000452666 M0QZ58 72 aa1.14□□□□□ -2.23
VPS8-212ENST00000452666 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
VPS8-212ENST00000452666 PKDREJQ9NTG1 2253 aa1.14□□□□□ -2.23
VPS8-212ENST00000452666 IGF2RP11717 2491 aa1.13□□□□□ -2.23
VPS8-212ENST00000452666 KRTAP21-3Q3LHN1 58 aa1.13□□□□□ -2.23
VPS8-212ENST00000452666 CELSR2Q9HCU4 2923 aa1.12□□□□□ -2.23
VPS8-212ENST00000452666 APELAP0DMC3 54 aa1.12□□□□□ -2.23
VPS8-212ENST00000452666 A0A0C4DFX4 3053 aa1.12□□□□□ -2.23
VPS8-212ENST00000452666 C2CD3Q4AC94 2353 aa1.11□□□□□ -2.23
VPS8-212ENST00000452666 SPTBN2O15020 2390 aa1.1□□□□□ -2.23
VPS8-212ENST00000452666 HTN1P15515 57 aa1.09□□□□□ -2.23
VPS8-212ENST00000452666 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
VPS8-212ENST00000452666 ABCA2Q9BZC7 2435 aa1.09□□□□□ -2.24
VPS8-212ENST00000452666 TENM1Q9UKZ4 2725 aa1.08□□□□□ -2.24
VPS8-212ENST00000452666 H3BUX3 64 aa1.08□□□□□ -2.24
VPS8-212ENST00000452666 M0R2T5 61 aa1.08□□□□□ -2.24
VPS8-212ENST00000452666 SPTBN1Q01082 2364 aaKnown RBP1.08□□□□□ -2.24
VPS8-212ENST00000452666 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
VPS8-212ENST00000452666 ZNF292O60281 2723 aa1.07□□□□□ -2.24
VPS8-212ENST00000452666 SPART-AS1P0CW21 52 aa1.07□□□□□ -2.24
VPS8-212ENST00000452666 MEGF8Q7Z7M0 2845 aa1.07□□□□□ -2.24
VPS8-212ENST00000452666 CHD9Q3L8U1 2897 aa1.07□□□□□ -2.24
VPS8-212ENST00000452666 MUC6Q6W4X9 2439 aa1.06□□□□□ -2.24
VPS8-212ENST00000452666 STATHP02808 62 aa1.06□□□□□ -2.24
VPS8-212ENST00000452666 TNP1P09430 55 aa1.06□□□□□ -2.24
VPS8-212ENST00000452666 SPINK6Q6UWN8 80 aa1.06□□□□□ -2.24
VPS8-212ENST00000452666 RHPN1-AS1Q9BWJ2 59 aa1.05□□□□□ -2.24
VPS8-212ENST00000452666 TTC28Q96AY4 2481 aa1.05□□□□□ -2.24
VPS8-212ENST00000452666 AKAP13Q12802 2813 aa1.04□□□□□ -2.24
VPS8-212ENST00000452666 H3BNG1 76 aa1.04□□□□□ -2.24
VPS8-212ENST00000452666 CSPG4Q6UVK1 2322 aa1.04□□□□□ -2.24
VPS8-212ENST00000452666 CHD7Q9P2D1 2997 aa1.03□□□□□ -2.24
VPS8-212ENST00000452666 A0A096LNI7 61 aa1.03□□□□□ -2.24
VPS8-212ENST00000452666 DEFB1P60022 68 aa1.03□□□□□ -2.24
VPS8-212ENST00000452666 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
VPS8-212ENST00000452666 F8P00451 2351 aa1.03□□□□□ -2.25
VPS8-212ENST00000452666 ABCA12Q86UK0 2595 aa1.02□□□□□ -2.25
VPS8-212ENST00000452666 CACNA1HO95180 2353 aa1.02□□□□□ -2.25
VPS8-212ENST00000452666 C9orf92A6NGG3 77 aa1.01□□□□□ -2.25
VPS8-212ENST00000452666 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
VPS8-212ENST00000452666 POLQO75417 2590 aa1.01□□□□□ -2.25
VPS8-212ENST00000452666 DEFB136Q30KP8 78 aa1□□□□□ -2.25
VPS8-212ENST00000452666 DEFB110Q30KQ9 67 aa1□□□□□ -2.25
VPS8-212ENST00000452666 GVINP1Q7Z2Y8 2422 aa0.99□□□□□ -2.25
VPS8-212ENST00000452666 AKAP6Q13023 2319 aa0.99□□□□□ -2.25
VPS8-212ENST00000452666 CELSR1Q9NYQ6 3014 aa0.99□□□□□ -2.25
VPS8-212ENST00000452666 HECTD1Q9ULT8 2610 aa0.99□□□□□ -2.25
VPS8-212ENST00000452666 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
VPS8-212ENST00000452666 U3KQA8 63 aa0.98□□□□□ -2.25
VPS8-212ENST00000452666 PKD1L2Q7Z442 2459 aa0.98□□□□□ -2.25
VPS8-212ENST00000452666 TENM4Q6N022 2769 aa0.98□□□□□ -2.25
VPS8-212ENST00000452666 WNK1Q9H4A3 2382 aa0.97□□□□□ -2.25
VPS8-212ENST00000452666 CEP290O15078 2479 aa0.97□□□□□ -2.25
VPS8-212ENST00000452666 OTOGQ6ZRI0 2925 aa0.96□□□□□ -2.26
VPS8-212ENST00000452666 VWFP04275 2813 aa0.96□□□□□ -2.26
VPS8-212ENST00000452666 CRYBG3Q68DQ2 2970 aa0.96□□□□□ -2.26
VPS8-212ENST00000452666 HELZ2Q9BYK8 2649 aaKnown RBP0.95□□□□□ -2.26
VPS8-212ENST00000452666 DEFB108BQ8NET1 73 aa0.95□□□□□ -2.26
VPS8-212ENST00000452666 SMR3AQ99954 134 aa0.95□□□□□ -2.26
VPS8-212ENST00000452666 EP300Q09472 2414 aaPredicted RBP0.95□□□□□ -2.26
VPS8-212ENST00000452666 TNRC18O15417 2968 aaPredicted RBP0.94□□□□□ -2.26
VPS8-212ENST00000452666 UBR5O95071 2799 aaPredicted RBP0.93□□□□□ -2.26
VPS8-212ENST00000452666 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
VPS8-212ENST00000452666 ATRQ13535 2644 aa0.92□□□□□ -2.26
VPS8-212ENST00000452666 COX14Q96I36 57 aa0.92□□□□□ -2.26
VPS8-212ENST00000452666 TENM2Q9NT68 2774 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms