RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
CHD3-206ENST00000452447 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
CHD3-206ENST00000452447 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
CHD3-206ENST00000452447 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
CHD3-206ENST00000452447 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
CHD3-206ENST00000452447 OR13C6PQ8NH95 151 aa7.31□□□□□ -1.24
CHD3-206ENST00000452447 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
CHD3-206ENST00000452447 A4D1N5 150 aa7.29□□□□□ -1.24
CHD3-206ENST00000452447 C9orf153Q5TBE3 101 aa7.29□□□□□ -1.24
CHD3-206ENST00000452447 A0A0B4J2C4 111 aa7.29□□□□□ -1.24
CHD3-206ENST00000452447 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
CHD3-206ENST00000452447 FXYD2P54710 66 aa7.27□□□□□ -1.25
CHD3-206ENST00000452447 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
CHD3-206ENST00000452447 ST20-AS1Q8NBB2 130 aa7.27□□□□□ -1.25
CHD3-206ENST00000452447 NHP2Q9NX24 153 aaKnown RBP7.27□□□□□ -1.25
CHD3-206ENST00000452447 SLC25A20O43772 301 aa7.26□□□□□ -1.25
CHD3-206ENST00000452447 Q8N377 158 aa7.25□□□□□ -1.25
CHD3-206ENST00000452447 DHRS4-AS1Q9P1J3 65 aa7.25□□□□□ -1.25
CHD3-206ENST00000452447 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
CHD3-206ENST00000452447 H3BMG7 143 aa7.25□□□□□ -1.25
CHD3-206ENST00000452447 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
CHD3-206ENST00000452447 CFC1P0CG37 223 aa7.24□□□□□ -1.25
CHD3-206ENST00000452447 Q1RN00 199 aa7.24□□□□□ -1.25
CHD3-206ENST00000452447 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
CHD3-206ENST00000452447 A0A1B0GWB2 263 aa7.22□□□□□ -1.25
CHD3-206ENST00000452447 COX7BP24311 80 aa7.22□□□□□ -1.25
CHD3-206ENST00000452447 C6orf99Q4VX62 202 aa7.22□□□□□ -1.25
CHD3-206ENST00000452447 COX6CP09669 75 aa7.21□□□□□ -1.25
CHD3-206ENST00000452447 LYRM7Q5U5X0 104 aa7.21□□□□□ -1.25
CHD3-206ENST00000452447 ANAPC13Q9BS18 74 aa7.21□□□□□ -1.25
CHD3-206ENST00000452447 SPRR1BP22528 89 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
CHD3-206ENST00000452447 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 Q6Q795 121 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 SNCGO76070 127 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
CHD3-206ENST00000452447 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
CHD3-206ENST00000452447 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
CHD3-206ENST00000452447 NAA38Q9BRA0 125 aaKnown RBP7.19□□□□□ -1.26
CHD3-206ENST00000452447 H7C2G1 150 aa7.18□□□□□ -1.26
CHD3-206ENST00000452447 PSMB2P49721 201 aa7.18□□□□□ -1.26
CHD3-206ENST00000452447 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
CHD3-206ENST00000452447 DEFB105AQ8NG35 78 aa7.18□□□□□ -1.26
CHD3-206ENST00000452447 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
CHD3-206ENST00000452447 TRBV7-6A0A0J9YX20 115 aa7.17□□□□□ -1.26
CHD3-206ENST00000452447 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
CHD3-206ENST00000452447 K7ERJ3 54 aa7.16□□□□□ -1.26
CHD3-206ENST00000452447 TEX49A0A1B0GTD5 131 aa7.16□□□□□ -1.26
CHD3-206ENST00000452447 H0YGX0 51 aa7.15□□□□□ -1.27
CHD3-206ENST00000452447 MT-ATP8P03928 68 aa7.15□□□□□ -1.27
CHD3-206ENST00000452447 TEN1Q86WV5 123 aa7.15□□□□□ -1.27
CHD3-206ENST00000452447 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.27
CHD3-206ENST00000452447 TRBV20-1A0A075B6N2 111 aa7.14□□□□□ -1.27
CHD3-206ENST00000452447 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
CHD3-206ENST00000452447 XP32Q5T750 250 aa7.12□□□□□ -1.27
CHD3-206ENST00000452447 GHRHP01286 108 aa7.12□□□□□ -1.27
CHD3-206ENST00000452447 CD164Q04900 197 aa7.12□□□□□ -1.27
CHD3-206ENST00000452447 NDUFV3P56181 108 aaKnown RBP7.11□□□□□ -1.27
CHD3-206ENST00000452447 SMIM20Q8N5G0 67 aa7.1□□□□□ -1.27
CHD3-206ENST00000452447 IGLV5-48A0A075B6I7 105 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 A0A1B0GX51 115 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 TRIAP1O43715 76 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
CHD3-206ENST00000452447 SMIM29Q86T20 159 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
CHD3-206ENST00000452447 DNAL4O96015 105 aa7.08□□□□□ -1.28
CHD3-206ENST00000452447 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
CHD3-206ENST00000452447 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
CHD3-206ENST00000452447 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
CHD3-206ENST00000452447 ATXN8Q156A1 80 aa7.07□□□□□ -1.28
CHD3-206ENST00000452447 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
CHD3-206ENST00000452447 H3BQ85 93 aa7.05□□□□□ -1.28
CHD3-206ENST00000452447 Q5XG85 94 aa7.05□□□□□ -1.28
CHD3-206ENST00000452447 A0A0G2JQZ4 141 aa7.03□□□□□ -1.28
CHD3-206ENST00000452447 TRACP01848 142 aa7.03□□□□□ -1.28
CHD3-206ENST00000452447 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
CHD3-206ENST00000452447 F8WEM9 126 aa7.03□□□□□ -1.28
CHD3-206ENST00000452447 LST1O00453 97 aa7.02□□□□□ -1.29
CHD3-206ENST00000452447 PCOTHQ58A44 107 aa7.02□□□□□ -1.29
CHD3-206ENST00000452447 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.02□□□□□ -1.29
CHD3-206ENST00000452447 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
CHD3-206ENST00000452447 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
CHD3-206ENST00000452447 C1orf195Q5TG92 126 aa7.01□□□□□ -1.29
CHD3-206ENST00000452447 CLEC2BQ92478 149 aa7.01□□□□□ -1.29
CHD3-206ENST00000452447 IMUPQ9GZP8 106 aa7.01□□□□□ -1.29
CHD3-206ENST00000452447 TCL1BO95988 128 aa7□□□□□ -1.29
CHD3-206ENST00000452447 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
CHD3-206ENST00000452447 IGLV8-61A0A075B6I0 122 aa6.99□□□□□ -1.29
CHD3-206ENST00000452447 Q6ZQY7 126 aa6.99□□□□□ -1.29
CHD3-206ENST00000452447 ANKRD29Q8N6D5 301 aa6.99□□□□□ -1.29
CHD3-206ENST00000452447 ORMDL1Q9P0S3 153 aa6.99□□□□□ -1.29
CHD3-206ENST00000452447 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
CHD3-206ENST00000452447 TMEM256-PLSCR3K7ERE1 68 aa6.98□□□□□ -1.29
CHD3-206ENST00000452447 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
CHD3-206ENST00000452447 Q6JHZ5 121 aa6.96□□□□□ -1.29
CHD3-206ENST00000452447 J3KT08 172 aa6.95□□□□□ -1.3
CHD3-206ENST00000452447 ACYP1P07311 99 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms