RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
RFX3-207ENST00000449190 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
RFX3-207ENST00000449190 LINC00575Q6W349 94 aa5.49□□□□□ -1.53
RFX3-207ENST00000449190 TSPAN13O95857 204 aa5.48□□□□□ -1.53
RFX3-207ENST00000449190 DEFB105AQ8NG35 78 aa5.48□□□□□ -1.53
RFX3-207ENST00000449190 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
RFX3-207ENST00000449190 TRIAP1O43715 76 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 HERC1Q15751 4861 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
RFX3-207ENST00000449190 TEX49A0A1B0GTD5 131 aa5.46□□□□□ -1.54
RFX3-207ENST00000449190 A0A1B0GX51 115 aa5.46□□□□□ -1.54
RFX3-207ENST00000449190 PCP4L1A6NKN8 68 aa5.46□□□□□ -1.54
RFX3-207ENST00000449190 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
RFX3-207ENST00000449190 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
RFX3-207ENST00000449190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.45□□□□□ -1.54
RFX3-207ENST00000449190 LAMTOR3Q9UHA4 124 aa5.45□□□□□ -1.54
RFX3-207ENST00000449190 DNAL4O96015 105 aa5.44□□□□□ -1.54
RFX3-207ENST00000449190 OCIAD2Q56VL3 154 aa5.44□□□□□ -1.54
RFX3-207ENST00000449190 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
RFX3-207ENST00000449190 A0A087X002 238 aa5.43□□□□□ -1.54
RFX3-207ENST00000449190 SPRR1BP22528 89 aa5.43□□□□□ -1.54
RFX3-207ENST00000449190 Q6ZQY7 126 aa5.43□□□□□ -1.54
RFX3-207ENST00000449190 IGLV9-49A0A0B4J1Y8 123 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 H3BQ85 93 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 COL5A1-AS1Q5SY13 56 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 PPDPFLQ8WWR9 84 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 CLEC2BQ92478 149 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 SNHG12Q9BXW3 62 aa5.42□□□□□ -1.54
RFX3-207ENST00000449190 IGLV5-48A0A075B6I7 105 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 F8WEM9 126 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 SSBP3-AS1Q7Z2R9 100 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 Q8N377 158 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 C3orf22Q8N5N4 141 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 FAM218AQ96MZ4 157 aa5.41□□□□□ -1.54
RFX3-207ENST00000449190 NAA38Q9BRA0 125 aaKnown RBP5.41□□□□□ -1.54
RFX3-207ENST00000449190 C9orf118A6NHY6 69 aa5.4□□□□□ -1.54
RFX3-207ENST00000449190 H3BUT2 72 aa5.4□□□□□ -1.54
RFX3-207ENST00000449190 MOBPQ13875 183 aa5.4□□□□□ -1.54
RFX3-207ENST00000449190 ATXN8Q156A1 80 aa5.4□□□□□ -1.54
RFX3-207ENST00000449190 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.54
RFX3-207ENST00000449190 LST1O00453 97 aa5.39□□□□□ -1.55
RFX3-207ENST00000449190 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
RFX3-207ENST00000449190 TRACP01848 142 aa5.39□□□□□ -1.55
RFX3-207ENST00000449190 FABP2P12104 132 aa5.39□□□□□ -1.55
RFX3-207ENST00000449190 LINC01547P58512 204 aaPredicted RBP5.39□□□□□ -1.55
RFX3-207ENST00000449190 ORMDL1Q9P0S3 153 aa5.39□□□□□ -1.55
RFX3-207ENST00000449190 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
RFX3-207ENST00000449190 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
RFX3-207ENST00000449190 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
RFX3-207ENST00000449190 Q8NBF4 154 aa5.38□□□□□ -1.55
RFX3-207ENST00000449190 TNXBP22105 4242 aa5.38□□□□□ -1.55
RFX3-207ENST00000449190 TMEM256-PLSCR3K7ERE1 68 aa5.37□□□□□ -1.55
RFX3-207ENST00000449190 SMIM29Q86T20 159 aa5.37□□□□□ -1.55
RFX3-207ENST00000449190 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
RFX3-207ENST00000449190 TCL1BO95988 128 aa5.35□□□□□ -1.55
RFX3-207ENST00000449190 BAALC-AS2P0C853 105 aa5.34□□□□□ -1.55
RFX3-207ENST00000449190 NDUFV3P56181 108 aaKnown RBP5.34□□□□□ -1.55
RFX3-207ENST00000449190 Q6JHZ5 121 aa5.34□□□□□ -1.55
RFX3-207ENST00000449190 SPINK1P00995 79 aa5.33□□□□□ -1.56
RFX3-207ENST00000449190 UBE2V1Q13404 147 aa5.33□□□□□ -1.56
RFX3-207ENST00000449190 H3BMG7 143 aa5.32□□□□□ -1.56
RFX3-207ENST00000449190 SPCS1Q9Y6A9 102 aa5.32□□□□□ -1.56
RFX3-207ENST00000449190 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
RFX3-207ENST00000449190 C9JAW5 83 aa5.31□□□□□ -1.56
RFX3-207ENST00000449190 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
RFX3-207ENST00000449190 ANKRD29Q8N6D5 301 aa5.31□□□□□ -1.56
RFX3-207ENST00000449190 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
RFX3-207ENST00000449190 CD164Q04900 197 aa5.3□□□□□ -1.56
RFX3-207ENST00000449190 LIMD2Q9BT23 127 aa5.29□□□□□ -1.56
RFX3-207ENST00000449190 A0A1B0GV72 72 aa5.28□□□□□ -1.56
RFX3-207ENST00000449190 RPS29P62273 56 aaKnown RBP5.28□□□□□ -1.56
RFX3-207ENST00000449190 RBM3P98179 157 aaKnown RBP5.28□□□□□ -1.56
RFX3-207ENST00000449190 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
RFX3-207ENST00000449190 GTF2H5Q6ZYL4 71 aa5.28□□□□□ -1.56
RFX3-207ENST00000449190 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
RFX3-207ENST00000449190 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
RFX3-207ENST00000449190 A0A0G2JQZ4 141 aa5.26□□□□□ -1.57
RFX3-207ENST00000449190 H3BT86 120 aa5.26□□□□□ -1.57
RFX3-207ENST00000449190 K7EP34 96 aa5.26□□□□□ -1.57
RFX3-207ENST00000449190 PRR4Q16378 134 aa5.26□□□□□ -1.57
RFX3-207ENST00000449190 TEN1Q86WV5 123 aa5.26□□□□□ -1.57
RFX3-207ENST00000449190 TRBV7-7A0A0K0K1E9 115 aa5.23□□□□□ -1.57
RFX3-207ENST00000449190 PDE6GP18545 87 aa5.23□□□□□ -1.57
RFX3-207ENST00000449190 Q6Q795 121 aa5.23□□□□□ -1.57
RFX3-207ENST00000449190 MTURNQ8N3F0 131 aa5.23□□□□□ -1.57
RFX3-207ENST00000449190 CCKP06307 115 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 C21orf62-AS1Q17RA5 79 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 Q5XG85 94 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 VPS25Q9BRG1 176 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 SS18L2Q9UHA2 77 aa5.22□□□□□ -1.57
RFX3-207ENST00000449190 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
RFX3-207ENST00000449190 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
RFX3-207ENST00000449190 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
RFX3-207ENST00000449190 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms