RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TAL2Q16559 108 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 FAM74A3Q4VXF1 159 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 LINC00299Q6ZSB3 139 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 DEFB105AQ8NG35 78 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 OSTCQ9NRP0 149 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 NAT8BQ9UHF3 227 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 IGLV5-48A0A075B6I7 105 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 FAM236AA0A1B0GUQ0 79 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 FAM236BA0A1B0GV22 79 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 IGLC3P0DOY3 106 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 SPINK7P58062 85 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 SPANXB1Q9NS25 103 aaPredicted RBP1.32□□□□□ -2.2
PMS1-215ENST00000447232 LAMTOR2Q9Y2Q5 125 aa1.32□□□□□ -2.2
PMS1-215ENST00000447232 A0A1B0GXF2 115 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 RBM3P98179 157 aaKnown RBP1.31□□□□□ -2.2
PMS1-215ENST00000447232 WFDC13Q8IUB5 93 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 MAP1LC3AQ9H492 121 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 F8W036 122 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 LST1O00453 97 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 ATP6V1G1O75348 118 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 S100A7L2Q5SY68 101 aa1.31□□□□□ -2.2
PMS1-215ENST00000447232 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
PMS1-215ENST00000447232 G0S2P27469 103 aa1.3□□□□□ -2.2
PMS1-215ENST00000447232 HINT1P49773 126 aaPredicted RBP1.3□□□□□ -2.2
PMS1-215ENST00000447232 SCGB3A1Q96QR1 104 aa1.3□□□□□ -2.2
PMS1-215ENST00000447232 TMEM250H0YL14 139 aa1.3□□□□□ -2.2
PMS1-215ENST00000447232 NDUFC2O95298 119 aa1.3□□□□□ -2.2
PMS1-215ENST00000447232 A0A1B0GWB2 263 aa1.29□□□□□ -2.2
PMS1-215ENST00000447232 S100A8P05109 93 aa1.29□□□□□ -2.2
PMS1-215ENST00000447232 ELOF1P60002 83 aaKnown RBP1.29□□□□□ -2.2
PMS1-215ENST00000447232 TEX46H3BTG2 121 aa1.29□□□□□ -2.2
PMS1-215ENST00000447232 MEIG1Q5JSS6 88 aa1.29□□□□□ -2.2
PMS1-215ENST00000447232 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
PMS1-215ENST00000447232 CLEC2BQ92478 149 aa1.29□□□□□ -2.2
PMS1-215ENST00000447232 NXT2Q9NPJ8 142 aaKnown RBP1.29□□□□□ -2.2
PMS1-215ENST00000447232 ARPC5O15511 151 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 IFITM3Q01628 133 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 KLKP1Q107X0 134 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 SOSTDC1Q6X4U4 206 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 COLCA2A8K830 154 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 LINC00587B1AMM8 73 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 LINC00313P59037 77 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 HERV-K104P63124 156 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 CBY1Q9Y3M2 126 aa1.28□□□□□ -2.2
PMS1-215ENST00000447232 LINC01549A6NIU2 74 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 C11orf86A6NJI1 115 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 COX7BP24311 80 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 Q6JHZ5 121 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 MAP1LC3CQ9BXW4 147 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 ZNF815PA8K554 130 aa1.27□□□□□ -2.21
PMS1-215ENST00000447232 LINC01546A6NGU7 62 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 TMEM170BQ5T4T1 132 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 SMIM7Q9BQ49 75 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 TMEM223A0PJW6 202 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 CEBPGP53567 150 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 ATP5L2Q7Z4Y8 100 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 BATF3Q9NR55 127 aa1.26□□□□□ -2.21
PMS1-215ENST00000447232 F8WEM9 126 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 COMMD7Q86VX2 200 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 CYSTM1Q9H1C7 97 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 SS18L2Q9UHA2 77 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 TRBV7-6A0A0J9YX20 115 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 MIEN1Q9BRT3 115 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 LCE3DQ9BYE3 92 aa1.25□□□□□ -2.21
PMS1-215ENST00000447232 A0A0J9YXY3 114 aa1.24□□□□□ -2.21
PMS1-215ENST00000447232 C5orf47Q569G3 176 aa1.24□□□□□ -2.21
PMS1-215ENST00000447232 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
PMS1-215ENST00000447232 MYMXA0A1B0GTQ4 84 aa1.24□□□□□ -2.21
PMS1-215ENST00000447232 HBDP02042 147 aa1.24□□□□□ -2.21
PMS1-215ENST00000447232 TRAV13-2A0A0B4J235 113 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 KANTRA0A1W2PQU2 76 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 RHEBQ15382 184 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 OCIAD2Q56VL3 154 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 PP632Q6XCG6 107 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 PRR15Q8IV56 129 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 SCGB1D1O95968 90 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 SIGMAR1Q99720 223 aa1.23□□□□□ -2.21
PMS1-215ENST00000447232 A0A096LNJ9 63 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 LCA10Q71F78 164 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 OR13C6PQ8NH95 151 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 S100ZQ8WXG8 99 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 SPANXDQ9BXN6 97 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 SMLR1H3BR10 107 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 SRP19P09132 144 aaKnown RBP1.22□□□□□ -2.21
PMS1-215ENST00000447232 TSPEAR-AS2P59090 65 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 ADIRFQ15847 76 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 BAGE3Q86Y29 109 aa1.22□□□□□ -2.21
PMS1-215ENST00000447232 IFITM2Q01629 132 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 LINC00518Q8N0U6 118 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 NHP2Q9NX24 153 aaKnown RBP1.21□□□□□ -2.22
PMS1-215ENST00000447232 SPANXCQ9NY87 97 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 A0A087WSZ3 146 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 MT1EP04732 61 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 C3orf79P0CE67 100 aa1.21□□□□□ -2.22
PMS1-215ENST00000447232 NPC2P61916 151 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms