RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ANGP03950 147 aaKnown RBP1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 DEFB107AQ8IZN7 70 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 TMEM263Q8WUH6 116 aaKnown RBP1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 LINC00472Q9H8W2 130 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 HIVEP3Q5T1R4 2406 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 F5P12259 2224 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 AKAP9Q99996 3911 aa1.82□□□□□ -2.12
TM9SF3-202ENST00000443638 SPTBN1Q01082 2364 aaKnown RBP1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 H0Y9P7 68 aa1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 GCHFRP30047 84 aa1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 NBASA2RRP1 2371 aa1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 CENPEQ02224 2701 aa1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
TM9SF3-202ENST00000443638 ANKHD1Q8IWZ3 2542 aaKnown RBP1.8□□□□□ -2.12
TM9SF3-202ENST00000443638 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
TM9SF3-202ENST00000443638 Q6ZRX8 168 aa1.8□□□□□ -2.12
TM9SF3-202ENST00000443638 KNTC1P50748 2209 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 ABCA1O95477 2261 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 A0A087WXM4 84 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 K7EIL1 84 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 IFI27P40305 119 aaPredicted RBP1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 GNGT1P63211 74 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 C10orf113Q5VZT2 155 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
TM9SF3-202ENST00000443638 APCP25054 2843 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 CNTRLQ7Z7A1 2325 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 DNAJC13O75165 2243 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 ANKRD36A6QL64 1941 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 A0A1B0GUT8 65 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 LY6G6CO95867 125 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 ATRQ13535 2644 aa1.78□□□□□ -2.12
TM9SF3-202ENST00000443638 CSMD2Q7Z408 3487 aa1.78□□□□□ -2.13
TM9SF3-202ENST00000443638 TRBV7-4A0A0J9YYF1 115 aa1.77□□□□□ -2.13
TM9SF3-202ENST00000443638 COX8AP10176 69 aa1.77□□□□□ -2.13
TM9SF3-202ENST00000443638 SPINK7P58062 85 aa1.77□□□□□ -2.13
TM9SF3-202ENST00000443638 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
TM9SF3-202ENST00000443638 CSPG4Q6UVK1 2322 aa1.77□□□□□ -2.13
TM9SF3-202ENST00000443638 NBEAL2Q6ZNJ1 2754 aa1.76□□□□□ -2.13
TM9SF3-202ENST00000443638 G3V318 75 aa1.76□□□□□ -2.13
TM9SF3-202ENST00000443638 SMR3AQ99954 134 aa1.76□□□□□ -2.13
TM9SF3-202ENST00000443638 FLNAP21333 2647 aaKnown RBP1.76□□□□□ -2.13
TM9SF3-202ENST00000443638 STAB1Q9NY15 2570 aa1.76□□□□□ -2.13
TM9SF3-202ENST00000443638 BSNQ9UPA5 3926 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 CCDC168Q8NDH2 2452 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 ACANP16112 2415 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 TRBV6-1A0A0K0K1D8 114 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 PIN1P1O15428 100 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 PKD1L1Q8TDX9 2849 aa1.75□□□□□ -2.13
TM9SF3-202ENST00000443638 HAMPP81172 84 aa1.74□□□□□ -2.13
TM9SF3-202ENST00000443638 HILPDAQ9Y5L2 63 aa1.74□□□□□ -2.13
TM9SF3-202ENST00000443638 KNL1Q8NG31 2342 aa1.74□□□□□ -2.13
TM9SF3-202ENST00000443638 JMJD1CQ15652 2540 aa1.74□□□□□ -2.13
TM9SF3-202ENST00000443638 COL6A5A8TX70 2615 aa1.73□□□□□ -2.13
TM9SF3-202ENST00000443638 NOTCH1P46531 2555 aa1.73□□□□□ -2.13
TM9SF3-202ENST00000443638 H3BVH4 76 aa1.73□□□□□ -2.13
TM9SF3-202ENST00000443638 TGP01266 2768 aa1.72□□□□□ -2.13
TM9SF3-202ENST00000443638 NDUFB1O75438 58 aa1.72□□□□□ -2.13
TM9SF3-202ENST00000443638 SFTA3P0C7M3 94 aa1.72□□□□□ -2.13
TM9SF3-202ENST00000443638 TACC2O95359 2948 aa1.71□□□□□ -2.14
TM9SF3-202ENST00000443638 A0A1B0GU69 56 aa1.71□□□□□ -2.14
TM9SF3-202ENST00000443638 S100A3P33764 101 aa1.71□□□□□ -2.14
TM9SF3-202ENST00000443638 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TM9SF3-202ENST00000443638 TLN2Q9Y4G6 2542 aa1.71□□□□□ -2.14
TM9SF3-202ENST00000443638 CACNA1CQ13936 2221 aa1.7□□□□□ -2.14
TM9SF3-202ENST00000443638 ROS1P08922 2347 aa1.7□□□□□ -2.14
TM9SF3-202ENST00000443638 FXYD6P3P58550 94 aa1.7□□□□□ -2.14
TM9SF3-202ENST00000443638 DCHS2Q6V1P9 2916 aa1.7□□□□□ -2.14
TM9SF3-202ENST00000443638 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
TM9SF3-202ENST00000443638 TRAV21A0A0B4J279 112 aa1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 C3orf79P0CE67 100 aa1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 ARL14EPLP0DKL9 152 aa1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 DEFB112Q30KQ8 113 aa1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 ZNF469Q96JG9 3925 aaPredicted RBP1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 PKDREJQ9NTG1 2253 aa1.69□□□□□ -2.14
TM9SF3-202ENST00000443638 RYR3Q15413 4870 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 CUBNO60494 3623 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 IFI6P09912 130 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 ATXN8Q156A1 80 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 WFDC9Q8NEX5 89 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 MEGF8Q7Z7M0 2845 aa1.68□□□□□ -2.14
TM9SF3-202ENST00000443638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.143e-8■■□□□ 11.5
TM9SF3-202ENST00000443638 DEFB109BQ30KR1 87 aa1.67□□□□□ -2.14
TM9SF3-202ENST00000443638 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
TM9SF3-202ENST00000443638 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
TM9SF3-202ENST00000443638 GAFA1Q96PS6 74 aa1.67□□□□□ -2.14
TM9SF3-202ENST00000443638 MAP1AP78559 2803 aaPredicted RBP1.67□□□□□ -2.14
TM9SF3-202ENST00000443638 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
TM9SF3-202ENST00000443638 FXYD6-FXYD2A0A087WZ82 144 aa1.66□□□□□ -2.14
TM9SF3-202ENST00000443638 COX6B1P14854 86 aa1.66□□□□□ -2.14
TM9SF3-202ENST00000443638 NREPQ16612 68 aa1.66□□□□□ -2.14
TM9SF3-202ENST00000443638 U3KQA8 63 aa1.66□□□□□ -2.14
TM9SF3-202ENST00000443638 KMT2CQ8NEZ4 4911 aaKnown RBP1.65□□□□□ -2.14
TM9SF3-202ENST00000443638 ANK3Q12955 4377 aaKnown RBP1.65□□□□□ -2.14
TM9SF3-202ENST00000443638 HMGA1P17096 107 aaKnown RBP1.65□□□□□ -2.15
TM9SF3-202ENST00000443638 CADP27708 2225 aa1.64□□□□□ -2.15
TM9SF3-202ENST00000443638 MXRA5Q9NR99 2828 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms